Literature DB >> 34898760

Bayesian Copula Density Deconvolution for Zero-Inflated Data in Nutritional Epidemiology.

Abhra Sarkar1, Debdeep Pati2, Bani K Mallick2, Raymond J Carroll3.   

Abstract

Estimating the marginal and joint densities of the long-term average intakes of different dietary components is an important problem in nutritional epidemiology. Since these variables cannot be directly measured, data are usually collected in the form of 24-hour recalls of the intakes, which show marked patterns of conditional heteroscedasticity. Significantly compounding the challenges, the recalls for episodically consumed dietary components also include exact zeros. The problem of estimating the density of the latent long-time intakes from their observed measurement error contaminated proxies is then a problem of deconvolution of densities with zero-inflated data. We propose a Bayesian semiparametric solution to the problem, building on a novel hierarchical latent variable framework that translates the problem to one involving continuous surrogates only. Crucial to accommodating important aspects of the problem, we then design a copula based approach to model the involved joint distributions, adopting different modeling strategies for the marginals of the different dietary components. We design efficient Markov chain Monte Carlo algorithms for posterior inference and illustrate the efficacy of the proposed method through simulation experiments. Applied to our motivating nutritional epidemiology problems, compared to other approaches, our method provides more realistic estimates of the consumption patterns of episodically consumed dietary components.

Entities:  

Keywords:  Copula; Density deconvolution; Measurement error; Nutritional epidemiology; Zero inflated data

Year:  2020        PMID: 34898760      PMCID: PMC8654344          DOI: 10.1080/01621459.2020.1782220

Source DB:  PubMed          Journal:  J Am Stat Assoc        ISSN: 0162-1459            Impact factor:   5.033


  10 in total

1.  Analysis of repeated measures data with clumping at zero.

Authors:  Janet A Tooze; Gary K Grunwald; Richard H Jones
Journal:  Stat Methods Med Res       Date:  2002-08       Impact factor: 3.021

2.  Development of the Healthy Eating Index-2005.

Authors:  Patricia M Guenther; Jill Reedy; Susan M Krebs-Smith
Journal:  J Am Diet Assoc       Date:  2008-11

3.  Fitting a bivariate measurement error model for episodically consumed dietary components.

Authors:  Saijuan Zhang; Susan M Krebs-Smith; Douglas Midthune; Adriana Perez; Dennis W Buckman; Victor Kipnis; Laurence S Freedman; Kevin W Dodd; Raymond J Carroll
Journal:  Int J Biostat       Date:  2011-01-06       Impact factor: 0.968

4.  Comparative validation of the Block, Willett, and National Cancer Institute food frequency questionnaires : the Eating at America's Table Study.

Authors:  A F Subar; F E Thompson; V Kipnis; D Midthune; P Hurwitz; S McNutt; A McIntosh; S Rosenfeld
Journal:  Am J Epidemiol       Date:  2001-12-15       Impact factor: 4.897

5.  A NEW MULTIVARIATE MEASUREMENT ERROR MODEL WITH ZERO-INFLATED DIETARY DATA, AND ITS APPLICATION TO DIETARY ASSESSMENT.

Authors:  Saijuan Zhang; Douglas Midthune; Patricia M Guenther; Susan M Krebs-Smith; Victor Kipnis; Kevin W Dodd; Dennis W Buckman; Janet A Tooze; Laurence Freedman; Raymond J Carroll
Journal:  Ann Appl Stat       Date:  2011-06-01       Impact factor: 2.083

6.  Bayesian Semiparametric Density Deconvolution in the Presence of Conditionally Heteroscedastic Measurement Errors.

Authors:  Abhra Sarkar; Bani K Mallick; John Staudenmayer; Debdeep Pati; Raymond J Carroll
Journal:  J Comput Graph Stat       Date:  2014-10-01       Impact factor: 2.302

7.  A new statistical method for estimating the usual intake of episodically consumed foods with application to their distribution.

Authors:  Janet A Tooze; Douglas Midthune; Kevin W Dodd; Laurence S Freedman; Susan M Krebs-Smith; Amy F Subar; Patricia M Guenther; Raymond J Carroll; Victor Kipnis
Journal:  J Am Diet Assoc       Date:  2006-10

8.  Bayesian Semiparametric Multivariate Density Deconvolution.

Authors:  Abhra Sarkar; Debdeep Pati; Antik Chakraborty; Bani K Mallick; Raymond J Carroll
Journal:  J Am Stat Assoc       Date:  2017-11-13       Impact factor: 5.033

9.  Update of the Healthy Eating Index: HEI-2015.

Authors:  Susan M Krebs-Smith; TusaRebecca E Pannucci; Amy F Subar; Sharon I Kirkpatrick; Jennifer L Lerman; Janet A Tooze; Magdalena M Wilson; Jill Reedy
Journal:  J Acad Nutr Diet       Date:  2018-09       Impact factor: 4.910

10.  Modeling data with excess zeros and measurement error: application to evaluating relationships between episodically consumed foods and health outcomes.

Authors:  Victor Kipnis; Douglas Midthune; Dennis W Buckman; Kevin W Dodd; Patricia M Guenther; Susan M Krebs-Smith; Amy F Subar; Janet A Tooze; Raymond J Carroll; Laurence S Freedman
Journal:  Biometrics       Date:  2009-12       Impact factor: 2.571

  10 in total

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