Literature DB >> 34854731

The Confusion in Renaming Species: Penicillium chrysogenum and Penicillium rubens.

Ulrich Kück1, Tim A Dahlmann1.   

Abstract

Entities:  

Year:  2021        PMID: 34854731      PMCID: PMC8638606          DOI: 10.1128/MRA.00464-21

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN: 2576-098X


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REPLY

Houbraken et al. (1) mention our genome sequencing work on strain P2niaD18 and claim that we have incorrectly identified this strain. We previously published data (2, 3) on strain Q176, the ancestor strain of P2niaD18, and referred to the 2011 paper by Houbraken et al. (4), which discussed the renaming of Penicillium chrysogenum to Penicillium rubens. However, the Seventeenth International Botanical Congress (Vienna, Austria; July 2005) (5) suggested that traditional taxonomic identifications should be retained for simplification and clarity. Indeed, P. rubens, the renamed P. chrysogenum, has often appeared in recent publications by diverse groups, but all of them used the traditional name P. chrysogenum (6–9). We expect that species name changes attached to taxonomic names will get updated over time, thus reflecting the ever-changing nature of taxonomic nomenclature. We ourselves have shown very recently that based on beta-tubulin sequences, P2niaD18 and Pc3 are P. rubens species (10). But when we used the sequence of the sex-determining mating type loci, P. rubens and P. chrysogenum strains were not distinguishable, thus suggesting that both species are only distinguishable by minor morphological and/or molecular differences. In summary, we appreciate the careful survey conducted by Houbraken and coworkers, all of whom are excellent taxonomists of moldy ascomycetes. However, we would like to ask them to amend their statement of “incorrect identification,” with one that simply mentions that the species were “renamed.” We foresee that in the international literature, penicillin-producing strains will continue to be called Penicillium chrysogenum, since all industrial strains can be traced back to a common ancestor, the wild-type strain NRRL 1951 (CBS 307.48), as was outlined in previous papers (8, 11). We do not want to start a major dispute about the taxonomy of penicillin production strains such as P. rubens but would rather like to close with a Shakespearean quote from the tragedy Romeo and Juliet: “That which we call a rose, by any other name would smell as sweet.”

ACKNOWLEDGMENT

Funded by the German Research Foundation (DFG), project KU 517/15-1.
  9 in total

1.  Sexual reproduction and mating-type-mediated strain development in the penicillin-producing fungus Penicillium chrysogenum.

Authors:  Julia Böhm; Birgit Hoff; Céline M O'Gorman; Simon Wolfers; Volker Klix; Danielle Binger; Ivo Zadra; Hubert Kürnsteiner; Stefanie Pöggeler; Paul S Dyer; Ulrich Kück
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-10       Impact factor: 11.205

2.  Sexual recombination as a tool for engineering industrial Penicillium chrysogenum strains.

Authors:  Tim A Dahlmann; Julia Böhm; Kordula Becker; Ulrich Kück
Journal:  Curr Genet       Date:  2015-05-21       Impact factor: 3.886

3.  Molecular analysis of mating type loci from the mycophenolic acid producer Penicillium brevicompactum: Phylogeny and MAT protein characterization suggest a cryptic sexual life cycle.

Authors:  Yasaman Mahmoudjanlou; Tim A Dahlmann; Ulrich Kück
Journal:  Fungal Biol       Date:  2020-07-29

4.  Fleming's penicillin producing strain is not Penicillium chrysogenum but P. rubens.

Authors:  Jos Houbraken; Jens C Frisvad; Robert A Samson
Journal:  IMA Fungus       Date:  2011-06-07       Impact factor: 3.515

Review 5.  Omics Approaches Applied to Penicillium chrysogenum and Penicillin Production: Revealing the Secrets of Improved Productivity.

Authors:  Carlos García-Estrada; Juan F Martín; Laura Cueto; Carlos Barreiro
Journal:  Genes (Basel)       Date:  2020-06-26       Impact factor: 4.096

Review 6.  Engineering of the Filamentous Fungus Penicillium chrysogenum as Cell Factory for Natural Products.

Authors:  Fernando Guzmán-Chávez; Reto D Zwahlen; Roel A L Bovenberg; Arnold J M Driessen
Journal:  Front Microbiol       Date:  2018-11-15       Impact factor: 5.640

7.  Synthetic control devices for gene regulation in Penicillium chrysogenum.

Authors:  László Mózsik; Zsófia Büttel; Roel A L Bovenberg; Arnold J M Driessen; Yvonne Nygård
Journal:  Microb Cell Fact       Date:  2019-11-18       Impact factor: 5.328

8.  Complete Sequencing and Chromosome-Scale Genome Assembly of the Industrial Progenitor Strain P2niaD18 from the Penicillin Producer Penicillium chrysogenum.

Authors:  Thomas Specht; Tim A Dahlmann; Ivo Zadra; Hubert Kürnsteiner; Ulrich Kück
Journal:  Genome Announc       Date:  2014-07-24

Review 9.  Insight into the Genome of Diverse Penicillium chrysogenum Strains: Specific Genes, Cluster Duplications and DNA Fragment Translocations.

Authors:  Juan F Martín
Journal:  Int J Mol Sci       Date:  2020-05-30       Impact factor: 5.923

  9 in total

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