Literature DB >> 34843412

Up-to-date on the evidence linking miRNA-related epitranscriptomic modifications and disease settings. Can these modifications affect cross-kingdom regulation?

João Tomé-Carneiro1, María-Carmen López de Las Hazas2, Hatim Boughanem3,4,5, Yvonne Böttcher6,7, Akin Cayir6,5, Manuel Macias González3,4, Alberto Dávalos2.   

Abstract

The field of epitranscriptomics is rapidly developing. Several modifications (e.g. methylations) have been identified for different RNA types. Current evidence shows that chemical RNA modifications can influence the whole molecule's secondary structure, translatability, functionality, stability, and degradation, and some are dynamically and reversibly modulated. miRNAs, in particular, are not only post-transcriptional modulators of gene expression but are themselves submitted to regulatory mechanisms. Understanding how these modifications are regulated and the resulting pathological consequences when dysregulation occurs is essential for the development of new therapeutic targets. In humans and other mammals, dietary components have been shown to affect miRNA expression and may also induce chemical modifications in miRNAs. The identification of chemical modifications in miRNAs (endogenous and exogenous) that can impact host gene expression opens up an alternative way to select new specific therapeutic targets.Hence, the aim of this review is to briefly address how RNA epitranscriptomic modifications can affect miRNA biogenesis and to summarize the existing evidence showing the connection between the (de)regulation of these processes and disease settings. In addition, we hypothesize on the potential effect certain chemical modifications could have on the potential cross-kingdom journey of dietary plant miRNAs.

Entities:  

Keywords:  Epitranscriptomics; cross-kingdom; m6A; methylation; miRNA modifications

Mesh:

Substances:

Year:  2021        PMID: 34843412      PMCID: PMC8782164          DOI: 10.1080/15476286.2021.2002003

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  166 in total

1.  Structural Basis for the Discriminative Recognition of N6-Methyladenosine RNA by the Human YT521-B Homology Domain Family of Proteins.

Authors:  Chao Xu; Ke Liu; Hazem Ahmed; Peter Loppnau; Matthieu Schapira; Jinrong Min
Journal:  J Biol Chem       Date:  2015-08-28       Impact factor: 5.157

2.  Cytoplasmic m6A reader YTHDF3 promotes mRNA translation.

Authors:  Ang Li; Yu-Sheng Chen; Xiao-Li Ping; Xin Yang; Wen Xiao; Ying Yang; Hui-Ying Sun; Qin Zhu; Poonam Baidya; Xing Wang; Devi Prasad Bhattarai; Yong-Liang Zhao; Bao-Fa Sun; Yun-Gui Yang
Journal:  Cell Res       Date:  2017-01-20       Impact factor: 25.617

Review 3.  m6A RNA Methylation: Ramifications for Gene Expression and Human Health.

Authors:  R Karthiya; Piyush Khandelia
Journal:  Mol Biotechnol       Date:  2020-08-25       Impact factor: 2.695

4.  The dynamic N(1)-methyladenosine methylome in eukaryotic messenger RNA.

Authors:  Dan Dominissini; Sigrid Nachtergaele; Sharon Moshitch-Moshkovitz; Eyal Peer; Nitzan Kol; Moshe Shay Ben-Haim; Qing Dai; Ayelet Di Segni; Mali Salmon-Divon; Wesley C Clark; Guanqun Zheng; Tao Pan; Oz Solomon; Eran Eyal; Vera Hershkovitz; Dali Han; Louis C Doré; Ninette Amariglio; Gideon Rechavi; Chuan He
Journal:  Nature       Date:  2016-02-10       Impact factor: 49.962

5.  The m6A Reader ECT2 Controls Trichome Morphology by Affecting mRNA Stability in Arabidopsis.

Authors:  Lian-Huan Wei; Peizhe Song; Ye Wang; Zhike Lu; Qian Tang; Qiong Yu; Yu Xiao; Xiao Zhang; Hong-Chao Duan; Guifang Jia
Journal:  Plant Cell       Date:  2018-04-30       Impact factor: 11.277

Review 6.  Deciphering RNA modifications at base resolution: from chemistry to biology.

Authors:  Turja K Debnath; Blerta Xhemalçe
Journal:  Brief Funct Genomics       Date:  2021-03-27       Impact factor: 4.241

7.  Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA.

Authors:  Jeffrey E Squires; Hardip R Patel; Marco Nousch; Tennille Sibbritt; David T Humphreys; Brian J Parker; Catherine M Suter; Thomas Preiss
Journal:  Nucleic Acids Res       Date:  2012-02-16       Impact factor: 16.971

8.  Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome.

Authors:  Bastian Linder; Anya V Grozhik; Anthony O Olarerin-George; Cem Meydan; Christopher E Mason; Samie R Jaffrey
Journal:  Nat Methods       Date:  2015-06-29       Impact factor: 28.547

Review 9.  Dietary microRNAs and cancer: A new therapeutic approach?

Authors:  Alberto Dávalos; Lucía Pinilla; María-Carmen López de Las Hazas; Paola Pinto-Hernández; Ferran Barbé; Eduardo Iglesias-Gutiérrez; David de Gonzalo-Calvo
Journal:  Semin Cancer Biol       Date:  2020-10-18       Impact factor: 15.707

10.  SIDT1-dependent absorption in the stomach mediates host uptake of dietary and orally administered microRNAs.

Authors:  Qun Chen; Fan Zhang; Lei Dong; Huimin Wu; Jie Xu; Hanqin Li; Jin Wang; Zhen Zhou; Chunyan Liu; Yanbo Wang; Yuyan Liu; Liangsheng Lu; Chen Wang; Minghui Liu; Xi Chen; Cheng Wang; Chunni Zhang; Dangsheng Li; Ke Zen; Fangyu Wang; Qipeng Zhang; Chen-Yu Zhang
Journal:  Cell Res       Date:  2020-08-17       Impact factor: 46.297

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