Literature DB >> 34837186

Sample-to-Answer Microfluidic Nucleic Acid Testing (NAT) on Lab-on-a-Disc for Malaria Detection at Point of Need.

Gihoon Choi1, Weihua Guan2,3.   

Abstract

One of the grand challenges for field-deployable NATs is related to the front end of the assays-nucleic acid extraction from raw samples. The ideal nucleic acid sample preparation should be simple, scalable, and easy-to-operate. In this chapter, we present a lab-on-a-disc NAT device for sample-to-answer malaria diagnosis. The parasite DNA sample preparation and subsequent real-time LAMP detection are seamlessly integrated on a disposable single microfluidic compact disc, driven by energy-efficient, non-centrifuge-based magnetic field interactions. Each disc contains four parallel testing units, which could be configured either as four identical tests or as four species-specific tests. When configured as species-specific tests, it could identify two of the most life-threatening malaria species (P. falciparum and P. vivax). The reagent disc with a 4-plex analyzer (discussed in Chapter 1 ) is capable of processing four samples simultaneously with 40 min turnaround time. It achieves a detection limit of ~0.5 parasites/μl for whole blood, sufficient for detecting asymptomatic parasite carriers. The assay is performed with an automated device described in Chapter 14 . The combination of sensitivity, specificity, cost, and scalable sample preparation suggests the real-time fluorescence LAMP device could be particularly useful for malaria screening in field settings.
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Malaria; Microfluidic; Nucleic acid testing; Point-of-care

Mesh:

Substances:

Year:  2022        PMID: 34837186      PMCID: PMC9191616          DOI: 10.1007/978-1-0716-1803-5_16

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  46 in total

1.  Contact angle hysteresis explained.

Authors:  Lichao Gao; Thomas J McCarthy
Journal:  Langmuir       Date:  2006-07-04       Impact factor: 3.882

2.  Rapid detection of Plasmodium vivax in saliva and blood using loop mediated isothermal amplification (LAMP) assay.

Authors:  Ruchi Singh; Deepali Savargaonkar; Rajendra Bhatt; Neena Valecha
Journal:  J Infect       Date:  2013-04-25       Impact factor: 6.072

3.  Detection and species identification of malaria parasites by isothermal tHDA amplification directly from human blood without sample preparation.

Authors:  Ying Li; Nirbhay Kumar; Anusha Gopalakrishnan; Christine Ginocchio; Ryhana Manji; Maureen Bythrow; Bertrand Lemieux; Huimin Kong
Journal:  J Mol Diagn       Date:  2013-06-22       Impact factor: 5.568

4.  Point of care testing for malaria using LAMP, loop mediated isothermal amplification.

Authors:  Michelle S Hsiang; Bryan Greenhouse; Philip J Rosenthal
Journal:  J Infect Dis       Date:  2014-05-01       Impact factor: 5.226

5.  High sensitivity of detection of human malaria parasites by the use of nested polymerase chain reaction.

Authors:  G Snounou; S Viriyakosol; X P Zhu; W Jarra; L Pinheiro; V E do Rosario; S Thaithong; K N Brown
Journal:  Mol Biochem Parasitol       Date:  1993-10       Impact factor: 1.759

6.  Detection of four Plasmodium species by genus- and species-specific loop-mediated isothermal amplification for clinical diagnosis.

Authors:  Eun-Taek Han; Risa Watanabe; Jetsumon Sattabongkot; Benjawan Khuntirat; Jeeraphat Sirichaisinthop; Hideyuki Iriko; Ling Jin; Satoru Takeo; Takafumi Tsuboi
Journal:  J Clin Microbiol       Date:  2007-06-13       Impact factor: 5.948

Review 7.  Novel techniques and future directions in molecular diagnosis of malaria in resource-limited settings.

Authors:  Eniyou Cheryll Oriero; Jean-Pierre Van Geertruyden; Davis C Nwakanma; Umberto D'Alessandro; Jan Jacobs
Journal:  Expert Rev Mol Diagn       Date:  2015-09-28       Impact factor: 5.225

8.  Highly sensitive detection of malaria parasitemia in a malaria-endemic setting: performance of a new loop-mediated isothermal amplification kit in a remote clinic in Uganda.

Authors:  Heidi Hopkins; Iveth J González; Spencer D Polley; Patrick Angutoko; John Ategeka; Caroline Asiimwe; Bosco Agaba; Daniel J Kyabayinze; Colin J Sutherland; Mark D Perkins; David Bell
Journal:  J Infect Dis       Date:  2013-04-30       Impact factor: 5.226

9.  A paper and plastic device for the combined isothermal amplification and lateral flow detection of Plasmodium DNA.

Authors:  Michael S Cordray; Rebecca R Richards-Kortum
Journal:  Malar J       Date:  2015-11-26       Impact factor: 2.979

10.  Paper-Origami-Based Multiplexed Malaria Diagnostics from Whole Blood.

Authors:  Gaolian Xu; Debbie Nolder; Julien Reboud; Mary C Oguike; Donelly A van Schalkwyk; Colin J Sutherland; Jonathan M Cooper
Journal:  Angew Chem Int Ed Engl       Date:  2016-08-24       Impact factor: 15.336

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