| Literature DB >> 34809617 |
Carlota Dobaño1,2,3, Selena Alonso4, Gemma Moncunill4,5, Iolanda Jordan6,7,8, Mariona Fernández de Sevilla9,10,11, Marta Vidal4, Alfons Jiménez4,9, Gemma Pons Tomas11, Chenjerai Jairoce4, María Melé Casas11, Rocío Rubio4, María Hernández García11, Gemma Ruiz-Olalla4, Mònica Girona-Alarcón10,12, Diana Barrios4, Rebeca Santano4, Robert A Mitchell4, Laura Puyol4, Leonie Mayer4, Jordi Chi4, Natalia Rodrigo Melero13, Carlo Carolis13, Aleix Garcia-Miquel14, Elisenda Bonet-Carne14,15,16, Joana Claverol10,17, Marta Cubells10,17, Claudia Fortuny10,18, Victoria Fumadó10,18, Cristina Jou10,19,20, Carmen Muñoz-Almagro9,10,21,22, Luis Izquierdo4,5, Quique Bassat4,9,11,23,24, Eduard Gratacós14,15,25, Ruth Aguilar4, Juan José García-García9,10,11.
Abstract
BACKGROUND: Surveillance tools to estimate viral transmission dynamics in young populations are essential to guide recommendations for school opening and management during viral epidemics. Ideally, sensitive techniques are required to detect low viral load exposures among asymptomatic children. We aimed to estimate SARS-CoV-2 infection rates in children and adult populations in a school-like environment during the initial COVID-19 pandemic waves using an antibody-based field-deployable and non-invasive approach.Entities:
Keywords: Antibody conversion; Children; SARS-CoV-2; Saliva; Schools
Mesh:
Substances:
Year: 2021 PMID: 34809617 PMCID: PMC8608564 DOI: 10.1186/s12916-021-02184-1
Source DB: PubMed Journal: BMC Med ISSN: 1741-7015 Impact factor: 8.775
Characteristics of participants in the summer school longitudinal study. All individuals with at least one saliva sample of sufficient volume available are included
| Initial visit | Final visit | Single visit | |
|---|---|---|---|
| ( | ( | ( | |
| Age continuous mediana | 8.0 (5.0-14.0) | 7.0 (5.0-10.0) | |
| Age stratifiedb | |||
| Children | 1181 (75.3%) | 316 (93.2%) | |
| Adults | 387 (24.7%) | 23 (6.8%) | |
| Sex | |||
| Male | 756 (48.2%) | 184 (54.3%) | |
| Female | 812 (51.8%) | 155 (45.7%) | |
| Dates collectionc | |||
| 1st week | 465 (29.7%) | 0 (0.0%) | 59 (17.4%) |
| 2nd week | 873 (55.7%) | 46 (2.9%) | 175 (51.3%) |
| 3rd week | 216 (13.8%) | 385 (24.6%) | 73 (21.5%) |
| 4th week | 14 (0.9%) | 603 (38.5%) | 25 (7.4%) |
| 5th week | 0 (0.0%) | 535 (34.1%) | 8 (2.4%) |
| SARS-CoV-2 RT-PCRd | |||
| Positive | 2 (0.1%) | 7 (0.4%) | 2 (0.6%) |
| Negative | 1552 (99.2%) | 1557 (99.5%) | 335 (98.8%) |
| Indeterminate | 1 (0.1%) | 1 (0.1%) | 0 (0.0%) |
| Not valid | 9 (0.6%) | 0 (0.0%) | 2 (0.6%) |
| Symptoms | |||
| Yes | 71 (4.5%) | 76 (4.8%) | 16 (4.7%) |
| Children | 62 (5.2%) | 65 (5.5%) | 16 (5.1%) |
| Adults | 9 (2.3%) | 11 (2.8%) | 0 (0.0%) |
| No | 1492 (95.2%) | 1492 (95.2%) | 323 (95.3%) |
| Children | 1119 (94.8%) | 1116 (94.5%) | 300 (94.9%) |
| Adults | 378 (97.7%) | 376 (97.2%) | 23 (100%) |
aMissing age of 9 adults. IQR in parenthesis
bAdult: Age 15 years or older
cAverage (median) time in days between initial and final visit was 14 (SD 6.69, IQR 7.0–21.0); 15.69 (SD 6.44, IQR 10–21) if only those with ≥ 6 days between visits are included
dIn the saliva antibody study cohort, there were 7 children and 3 adults who tested RT-PCR positive. Among them, one child and one adult were single visits. There was one adult who was positive at the first visit and negative at the last visit, and one child who was positive at both visits; therefore there were 11 positive samples. Among the paired samples, there were 8 with a positive RT-PCR at any timepoint (6 children, 2 adults). In the main infection cohort study [25], 12 participants (9 children among them) were positive by RT-PCR at least in one visit, and from 11 of them there was a saliva sample available for serology. 3446 samples were RT-PCR negative, 2 indeterminate, 11 invalid, and 7 non-available. Only 5 adults have had COVID-19 before the study
Fig. 1Evolution of IgM, IgA, and IgG levels to SARS-CoV-2 antigens between the first and last visit in paired samples. Individuals who decreased or increased IgM (A), IgA (B), or IgG (C) levels per each isotype and antigen are shown in different plots. Gray lines mean < 3-fold-change, blue lines mean 3–4-fold change, and red lines mean ≥4-fold-change. Table 1 indicates the number and proportion of individuals in each category. The levels of antibodies in individuals with only one sample are depicted in Figure S3
Saliva antibody conversion rates between the first and last study visit
| Antibody | Antigen | Increaseda | Decreasedb | Maintainedc | ||||
|---|---|---|---|---|---|---|---|---|
| Fold change: | < 4 | Total | < 4 | ≥4 | Total | - | ||
| 207 (13.6%) | 0 | 207 | 245 (16.1%) | 0 (0%) | 245 | 1066 (70.2%) | ||
| 241 (15.9%) | 1 | 242 | 344 (22.6%) | 1 (0.06%) | 345 | 931 (61.3%) | ||
| 192 (12.6%) | 0 | 192 | 212 (13.9%) | 0 (0%) | 212 | 1114 (73.4%) | ||
| 223 (14.7%) | 0 | 223 | 243 (16.0%) | 0 (0%) | 243 | 1052 (69.3%) | ||
| 268 (17.6%) | 2 | 270 | 340 (22.4%) | 2 (0.13%) | 342 | 906 (59.7%) | ||
| 3 | 0 (0.0%) | - | ||||||
| 1 | - | - | ||||||
| 524 (34.5%) | 20 | 544 | 619 (40.8%) | 27 (1.7%) | 646 | 328 (21.6%) | ||
| 546 (35.9%) | 15 | 561 | 656 (43.2%) | 26 (1.7%) | 682 | 275 (18.1%) | ||
| 461 (30.4%) | 5 | 466 | 551 (36.3%) | 7 (0.4%) | 558 | 494 (32.5%) | ||
| 442 (29.1%) | 3 | 445 | 529 (34.8%) | 6 (0.4%) | 535 | 538 (35.4%) | ||
| 481 (31.7% | 8 | 489 | 627 (41.3%) | 19 (1.2%) | 646 | 383 (25.2%) | ||
| 36 | 1 (0.1%) | - | ||||||
| 8 | - | - | ||||||
| 566 (37.3%) | 14 | 580 | 509 (33.5%) | 14 (1.0%) | 523 | 415 (27.3%) | ||
| 586 (38.6%) | 15 | 601 | 561 (36.9%) | 18 (1.3%) | 579 | 338 (22.3%) | ||
| 439 (28.9% | 2 | 441 | 419 (27.6%) | 5 (0.3%) | 424 | 653 (43.0%) | ||
| 418 (27.5%) | 3 | 421 | 376 (24.8%) | 5 (0.3%) | 381 | 716 (47.2%) | ||
| 504 (33.2%) | 6 | 510 | 500 (32.9%) | 12 (0.8%) | 512 | 496 (32.7%) | ||
| 26 | 4 (0.3%) | - | ||||||
| 9 | - | |||||||
| 49 | 0 (0.0%) | - | ||||||
| 13 | - | - | ||||||
aThe number (N) of subjects who increased antibody levels was calculated for each isotype/antigen pair, per Ig isotype, and globally, out of the 1518 individuals in whom two samples were available with ≥6 days of difference (see also Fig. 1). Individuals who increased antibody levels ≥4-fold change (FC) for at least one isotype/antigen were considered antibody positive. The total saliva antibody conversion rate (% in bold) was calculated as the proportion of positive individuals
bA decrease in antibody levels ≥4 FC was interpreted as negativization for any given isotype/antigen pair. Within an individual, complete antibody reversion was considered only if the antibody levels decreased ≥4 FC for all the isotype/antigen pairs
cIndividuals who maintained antibody levels between visits are computed for comparison
dN nucleocapsid, CT C-terminus end, FL full-length, RBD receptor binding domain of spike (S). Antibody conversion for N FL is shown separately as representative of potential cross-reactivity with endemic human coronaviruses
Fig. 2Antibody levels by age and symptoms. Radar charts representing the median of antibody levels (in log10MFI) in saliva collected in the last or single visits, comparing children (< 15 years old) versus adults (A), and symptomatic (n=43, blue) versus asymptomatic (n=2635, red) children (B). Group medians were compared through Mann-Whitney U test. Statistically significant differences between comparisons are highlighted with asterisks. * p ≤ 0.05, ** p ≤ 0.01, *** p ≤ 0.001
Fig. 3Heatmap analysis of antibody responses per individual. Fold change antibody levels (MFI) with hierarchical clustering (Canberra), including all individuals with paired first and last visit samples, showing decreasers (blue scale), maintainers and increasers (red scale) (A) or including only individuals who increased or decreased antibody levels ≥4-fold between the two visits (B). Antibody levels (log10 MFI) with hierarchical clustering (Euclidean) in all individuals (C)