| Literature DB >> 34795791 |
Mina Jahangiri1, Fakher Rahim2, Najmaldin Saki2, Amal Saki Malehi2,3.
Abstract
OBJECTIVE: Several discriminating techniques have been proposed to discriminate between β-thalassemia trait (βTT) and iron deficiency anemia (IDA). These discrimination techniques are essential clinically, but they are challenging and typically difficult. This study is the first application of the Bayesian tree-based method for differential diagnosis of βTT from IDA.Entities:
Mesh:
Year: 2021 PMID: 34795791 PMCID: PMC8594992 DOI: 10.1155/2021/6401105
Source DB: PubMed Journal: Comput Math Methods Med ISSN: 1748-670X Impact factor: 2.238
Comparison between hematological parameters of study groups using the Mann–Whitney U test (data are presented as median (IQR)).
|
| IDA |
| |
|---|---|---|---|
| MCV (fl) | 62 (5.4) | 72.2 (9.7) | <0.001 |
| MCH (pg) | 19.6 (1.8) | 21.9 (4.2) | <0.001 |
| Hb (g/dl) | 11 (1.6) | 10.5 (2.6) | <0.001 |
| RDW (%) | 15.7 (1.7) | 15.7 (3.3) | 0.94 |
Figure 1The tree structure of the CART algorithm based on the Gini index (blue terminal node: βTT and yellow terminal node: IDA).
Figure 2The tree structure of the CART algorithm based on the entropy index (blue terminal node: βTT and yellow terminal node: IDA).
Figure 3Decision tree for the BLTREED model (α = 0.95, β = 1, Log integrated likelihood = 123.43) (blue terminal node: βTT and yellow terminal node: IDA).
Confusion table of the BLTREED model and CART algorithm for training dataset and test dataset.
| Dataset | Algorithm | Disease status | TP | FP | FN | TN | (TP+TN) |
|---|---|---|---|---|---|---|---|
| Training | BLTREED |
| 363 | 25 | 13 | 234 | 597 |
| IDA | 234 | 13 | 25 | 363 | |||
| CART1 |
| 366 | 46 | 10 | 213 | 579 | |
| IDA | 213 | 10 | 46 | 366 | |||
| CART2 |
| 358 | 23 | 18 | 236 | 594 | |
| IDA | 236 | 18 | 23 | 358 | |||
|
| |||||||
| Test | BLTREED |
| 155 | 8 | 6 | 103 | 258 |
| IDA | 103 | 6 | 8 | 155 | |||
| CART1 |
| 160 | 33 | 1 | 78 | 238 | |
| IDA | 78 | 1 | 33 | 160 | |||
| CART2 |
| 159 | 12 | 2 | 99 | 258 | |
| IDA | 99 | 2 | 12 | 159 | |||
Sensitivity (TPR), specificity (TNR), false-positive rate (FPR), false-negative rate (FNR), positive predictive value (PPV), negative predictive value (NPV), accuracy, Youden's index, positive likelihood ratio (PLR), negative likelihood ratio (NLR), and diagnostic odds ratio (DOR) of the BLTREED model in prediction of IDA and βTT groups and their 95% exact confidence interval for training and test dataset.
| BLTREED | CART1 | CART2 | ||||
|---|---|---|---|---|---|---|
| Accuracy measure | Training dataset | Test dataset | Training dataset | Test dataset | Training dataset | Test dataset |
| TPR | 97 | 96 | 97 | 99 | 95 | 99 |
| TNR | 90 | 93 | 82 | 70 | 91 | 89 |
| FNR | 3 | 4 | 3 | 1 | 5 | 1 |
| FPR | 10 | 7 | 18 | 30 | 9 | 11 |
| PPV | 94 | 95 | 89 | 83 | 94 | 93 |
| NPV | 95 | 94 | 96 | 99 | 93 | 98 |
| Youden's index | 87 | 89 | 80 | 70 | 86 | 88 |
| Accuracy | 94 | 95 | 91 | 87 | 93 | 95 |
| PLR | 10 | 13.36 | 5.48 | 3.34 | 10.72 | 9.14 |
| NLR | 0.04 | 0.04 | 0.03 | 0.01 | 0.05 | 0.01 |
The area under ROC curve (AUC) of BLTREED and CART algorithms in the prediction of IDA and βTT groups for training and test dataset (SE: standard error of AUC; CI: confidence interval).
| BLTREED | CART1 | CART2 | ||||
|---|---|---|---|---|---|---|
| Training dataset | Test dataset | Training dataset | Test dataset | Training dataset | Test dataset | |
| AUC | 0.99 | 0.98 | 0.93 | 0.94 | 0.97 | 0.97 |
| SE | 0.003 | 0.009 | 0.011 | 0.015 | 0.006 | 0.011 |
| 95% CI | (0.98, 0.99) | (0.96, 0.99) | (0.90, 0.95) | (0.91, 0.97) | (0.96, 0.99) | (0.95, 1) |
|
| <0.001 | <0.001 | <0.001 | <0.001 | <0.001 | <0.001 |
Figure 4Receiver operating characteristic curves of BLTREED and CART algorithms in the prediction of IDA and βTT groups for test dataset.