Literature DB >> 34761295

Deinococcus aestuarii sp. nov. and Deinococcus aquaedulcis sp. nov., two novel resistant bacteria isolated from pearl river estuary.

Ling-Zi Yin1, Jia-Ling Li1, Ze-Tao Liu1, Bao-Zhu Fang2, Pandeng Wang1, Xiao-Qing Luo1, Lei Dong1, Li Duan1, Shan-Hui Li1, Wen-Jun Li3,4.   

Abstract

Two novel species of the genus Deinococcus, designated SYSU M49105T and SYSU M42101T, were isolated from freshwater samples of the Pearl River estuary in Guangdong, China. Phylogenetic analysis using 16S rRNA gene sequence indicated that strains SYSU M49105T and SYSU M42101T showed the highest sequence similarities to Deinococcus aetherius JCM 11751 T (93.6%) and Deinococcus multiflagellatus NBRC 112888 T (97.3%), respectively. Cells of both strains were Gram-staining positive, aerobic, coccus-shaped, oxidase-negative and non-motile. The cell wall contained meso-diaminopimelic acid as their diagnostic diamino acid. MK-8 was the predominant respiratory quinone for both strains. The polar lipid profile of SYSU M49105T contained two unidentified phosphoglycolipids, nine unidentified glycolipids, and five unidentified polar lipids. SYSU M42101T had one unidentified phosphoglycolipid, nine unidentified glycolipids, one unidentified aminophospholipid and four unidentified polar lipids. The major fatty acids of strains SYSU M49105T and SYSU M42101T were summed feature 3 (C16:1 ω7c and/ or C16:1 ω6c) and C16:0. The G + C contents of the novel isolates based on genomic DNAs were 69.6% and 67.4%, respectively. On the basis of phenotypic, genotypic and phylogenetic data, strains SYSU M49105T and SYSU M42101T should be considered to represent two novel species in the genus Deinococcus, for which the names Deinococcus aestuarii sp. nov. and Deinococcus aquaedulcis sp. nov. were proposed with the type strains SYSU M49105T (= KCTC 43258 T = CGMCC 1.18609 T) and SYSU M42101T (= KCTC 43257 T = CGMCC 1.18614 T), respectively.
© 2021. The Author(s), under exclusive licence to Springer Nature Switzerland AG.

Entities:  

Keywords:  Deinococcus; Deinococcus aestuarii sp. nov.; Deinococcus aquaedulcis sp. nov.; Pearl river estuary

Mesh:

Substances:

Year:  2021        PMID: 34761295     DOI: 10.1007/s10482-021-01680-x

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  31 in total

1.  Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.

Authors:  J Castresana
Journal:  Mol Biol Evol       Date:  2000-04       Impact factor: 16.240

2.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

3.  Distribution of menaquinones in actinomycetes and corynebacteria.

Authors:  M D Collins; T Pirouz; M Goodfellow; D E Minnikin
Journal:  J Gen Microbiol       Date:  1977-06

Review 4.  Against all odds: the survival strategies of Deinococcus radiodurans.

Authors:  J R Battista
Journal:  Annu Rev Microbiol       Date:  1997       Impact factor: 15.500

5.  Deinococcus depolymerans sp. nov., a gamma- and UV-radiation-resistant bacterium, isolated from a naturally radioactive site.

Authors:  Dalal Asker; Tarek S Awad; Lynne McLandsborough; Teruhiko Beppu; Kenji Ueda
Journal:  Int J Syst Evol Microbiol       Date:  2010-07-09       Impact factor: 2.747

6.  Nonstaining (KOH) method for determination of gram reactions of marine bacteria.

Authors:  J D Buck
Journal:  Appl Environ Microbiol       Date:  1982-10       Impact factor: 4.792

7.  Evolutionary trees from DNA sequences: a maximum likelihood approach.

Authors:  J Felsenstein
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

8.  Deinococcus deserti sp. nov., a gamma-radiation-tolerant bacterium isolated from the Sahara Desert.

Authors:  Arjan de Groot; Virginie Chapon; Pascale Servant; Richard Christen; Marion Fischer-Le Saux; Suzanne Sommer; Thierry Heulin
Journal:  Int J Syst Evol Microbiol       Date:  2005-11       Impact factor: 2.747

9.  Deinococcus reticulitermitis sp. nov., isolated from a termite gut.

Authors:  Wen Chen; Baojun Wang; Huazhu Hong; Hong Yang; Shuang-Jiang Liu
Journal:  Int J Syst Evol Microbiol       Date:  2011-02-18       Impact factor: 2.747

10.  Deinococcus geothermalis sp. nov. and Deinococcus murrayi sp. nov., two extremely radiation-resistant and slightly thermophilic species from hot springs.

Authors:  A C Ferreira; M F Nobre; F A Rainey; M T Silva; R Wait; J Burghardt; A P Chung; M S da Costa
Journal:  Int J Syst Bacteriol       Date:  1997-10
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