| Literature DB >> 34758198 |
Fan Cheng1, Xiao-Min Si1,2, Gong-Li Yang3, Lan Zhou1,2.
Abstract
BACKGROUND: Published researches have suggested some associations between PPAR-γ and ischemic stroke (IS) development. This meta-analysis was conducted to evaluate the association between PPAR-γ gene polymorphisms and IS risk.Entities:
Keywords: PPAR-γ; meta-analysis; polymorphism; stroke
Mesh:
Substances:
Year: 2021 PMID: 34758198 PMCID: PMC8671800 DOI: 10.1002/brb3.2434
Source DB: PubMed Journal: Brain Behav Impact factor: 2.708
Characteristics of case–control studies on peroxisome proliferator‐activated receptor‐γ (PPAR‐γ) polymorphisms and ischemic stroke risk
| Genotype distribution | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| First author | Year | Country | Ethnicity | Control design | Genotype method | Case | Control | Case | Control |
| MAF | NOS evaluation | Matching criteria | ||||
| Rs1801282 | CC | CG | GG | CC | CG | GG | |||||||||||
| Shen | 2005 | China | Asian | PB | PCR‐RFLP | 70 | 95 | 66 | 3 | 1 | 89 | 6 | 0 | .75 | 0.03 | 9 | Healthy check‐ups |
| Lee‐1 | 2006 | Korea | Asian | HB | PCR‐RFLP | 302 | 424 | 290 | 12 | 0 | 384 | 40 | 0 | .31 | 0.05 | 10 | Age‐matched health and diabetes controls |
| Lee‐2 | 2007 | Korea | Asian | PB | PCR‐RFLP | 134 | 129 | 128 | 6 | 0 | 117 | 12 | 0 | .58 | 0.05 | 10 | Health check‐ups |
| Huang | 2007 | China | Asian | PB | PCR‐RFLP | 199 | 200 | 171 | 18 | 1 | 177 | 23 | 0 | .39 | 0.06 | 9 | Healthy check‐ups |
| Zafarmand | 2008 | Netherlands | Caucasian | PB | Multilocus genotyping assay | 49 | 1519 | 38 | 10 | 1 | 1143 | 346 | 30 | .52 | 0.13 | 10 | NA |
| Bazina | 2015 | Croatia | Caucasian | PB | PCR‐RFLP | 114 | 187 | 84 | 27 | 3 | 140 | 44 | 3 | .83 | 0.13 | 9 | Sex and age matched healthy staff |
| Tong‐1 | 2015 | China | Asian | PB | TaqMan | 100 | 100 | 80 | 19 | 1 | 78 | 19 | 3 | .19 | 0.13 | 9 | Age and gender and ethnically matched normal healthy controls |
| Tong‐2 | 2016 | China | Asian | PB | TaqMan | 648 | 648 | 606 | 40 | 2 | 580 | 67 | 1 | .51 | 0.05 | 10 | Age and gender and ethnically matched normal healthy controls |
| Li | 2016 | China | Asian | HB | PCR‐RFLP | 302 | 272 | 274 | 26 | 2 | 250 | 21 | 1 | .44 | 0.04 | 9 | NA |
| Wang | 2019 | China | Asian | PB | SNaPshot Multiplex Kit | 895 | 883 | 756 | 129 | 10 | 807 | 75 | 1 | .59 | 0.04 | 10 | Age‐ and sex‐matched healthy controls |
| Rs3856806 | CC | CT | TT | CC | CT | TT | |||||||||||
| Yuan | 2008 | China | Asian | PB | PCR‐RFLP | 293 | 203 | 150 | 134 | 14 | 126 | 72 | 5 | .15 | 0.20 | 9 | NA |
| Lu | 2009 | China | Asian | PB | PCR‐RFLP | 114 | 120 | 87 | 23 | 4 | 72 | 41 | 7 | .72 | 0.23 | 9 | Healthy check‐ups |
| Liu | 2010 | China | Asian | PB | PCR‐RFLP | 168 | 165 | 128 | 36 | 4 | 100 | 60 | 5 | .26 | 0.21 | 8 | Healthy check‐ups |
| Sun | 2010 | China | Asian | PB | PCR‐RFLP | 90 | 94 | 45 | 42 | 3 | 56 | 36 | 2 | .16 | 0.21 | 9 | Age‐ and sex‐matched healthy check‐ups |
| Wei | 2013 | China | Asian | PB | PCR‐RFLP | 112 | 112 | 87 | 19 | 6 | 78 | 25 | 9 | <.01 | 0.19 | 8 | Healthy check‐ups |
| Chehaibi | 2014 | Tunisia | Caucasian | PB | PCR‐RFLP | 196 | 192 | 143 | 39 | 14 | 118 | 46 | 28 | <.01 | 0.27 | 8 | Individuals with normal glucose |
| Wang | 2019 | China | Asian | PB | SNaPshot Multiplex Kit | 895 | 883 | 515 | 322 | 58 | 587 | 274 | 22 | .13 | 0.18 | 10 | Age‐ and sex‐matched healthy controls |
Note: Hardy–Weinberg equilibrium (HWE) in control.
Abbreviations: HB, hospital‐based control; NA, not available; NOS, Newcastle–Ottawa scale; PB, population‐based control. PCR‐RFLP; polymerase chain reaction–restriction fragment length polymorphism.
FIGURE 1Flow diagram of the study selection process
Summary odd ratios (ORs) and 95% confidence interval (CI) of peroxisome proliferator‐activated receptor‐γ (PPAR‐γ) polymorphism and ischemic stroke risk
| Allelic model: G vs. C | Codominant model: CG vs. CC | Codominant model: GG vs. CC | Dominant model: CG+GG vs. CC | Recessive model: GG vs. CC+CG | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Rs1801282C/G |
| OR | 95% CI |
|
| OR | 95% CI |
|
| OR | 95% CI |
|
| OR | 95% CI |
|
| OR | 95% CI |
|
|
| Total | 10 | 0.90 | 0.62–1.29 | .55 | 76.5 | 0.84 | 0.58–1.21 | .35 | 73.2 | 2.17 | 1.09–4.35 | .03 | 0 | 0.86 | 0.59–1.26 | .44 | 75.4 | 2.15 | 1.07–4.32 | .03 | 0 |
| Ethnicity | |||||||||||||||||||||
| Asian | 8 | 0.86 | 0.54–1.37 | .52 | 81.6 | 0.80 | 0.50–1.28 | .35 | 79.1 | 2.65 | 1.11–6.35 | .03 | 4.6 | 0.83 | 0.52–1.33 | .43 | 80.7 | 2.61 | 1.09–6.27 | .03 | 0.9 |
| Caucasian | 2 | 1.02 | 0.70–1.48 | .92 | 0 | 0.96 | 0.62–1.48 | .86 | 0 | 1.36 6 | 0.40–4.65 | .62 | 0 | 0.99 | 0.65–1.50 | .96 | 0 | 1.37 | 0.40–4.69 | .61 | 0 |
| Control design | |||||||||||||||||||||
| PB | 8 | 0.95 | 0.64–1.41 | .81 | 76.2 | 0.89 | 0.59–1.33 | .56 | 72.7 | 2.21 | 1.07–4.55 | .03 | 0 | 0.92 | 0.61–1.39 | .68 | 75.0 | 2.19 | 1.06–4.53 | .03 | 0 |
| HB | 2 | 0.71 | 0.25–2.00 | .51 | 83.1 | 0.68 | 0.24–1.89 | .46 | 81.0 | 1.82 | 0.16–20.25 | .62 | NA | 0.69 | 0.24–1.97 | .49 | 82.4 | 1.81 | 0.16–20.04 | .63 | NA |
| Subjects number | |||||||||||||||||||||
| <500 | 5 | 0.91 | 0.68–1.22 | .53 | 0 | 0.85 | 0.61–1.18 | .34 | 0 | 1.29 | 0.45–3.70 | .63 | 0 | 0.87 | 0.64–1.21 | .41 | 0 | 1.30 | 0.45–3.70 | .63 | 0 |
| ≥500 | 5 | 0.91 | 0.50–1.66 | .75 | 88.3 | 0.85 | 0.46–1.57 | .61 | 86.8 | 3.26 | 1.26–8.43 | .02 | 0 | 0.88 | 0.47–1.64 | .69 | 87.9 | 3.22 | 1.24–8.38 | .02 | 0 |
| rs3856806 C/T | T vs. C | CT vs. CC | TT vs. CC | CT+TT vs. CC | TT vs. CC+CT | ||||||||||||||||
| Total | 7 | 0.87 | 0.59–1.28 | .48 | 88.7 | 0.88 | 0.59–1.29 | .50 | 81.7 | 1.00 | 0.45–2.22 | 1.00 | 78.8 | 0.86 | 0.56–1.32 | .49 | 86.7 | 1.03 | 0.51–2.08 | .94 | 72.9 |
| HWE status | |||||||||||||||||||||
| HWE‐yes | 5 | 1.00 | 0.66–1.52 | .99 | 87.5 | 0.95 | 0.59–1.53 | .83 | 85.3 | 1.46 | 0.66–3.21 | .35 | 61.7 | 0.98 | 0.59–1.61 | .92 | 87.6 | 1.54 | 0.82–2.89 | .18 | 43.2 |
| HWE‐no | 2 | 0.60 | 0.45–0.80 | <.01 | 0 | 0.69 | 0.47–1.03 | .07 | 0 | 0.46 6–0. | 0.26–0.82 | .01 | 0 | 0.61 | 0.43–0.87 | .01 | 0 | 0.50 | 0.28–0.88 | .02 | 0 |
| Ethnicity | |||||||||||||||||||||
| Asian | 6 | 0.94 | 0.64–1.39 | .76 | 86.6 | 0.91 | 0.59–1.40 | .66 | 83.1 | 1.23 | 0.58–2.63 | .59 | 66.4 | 0.92 | 0.58–1.45 | .72 | 86.1 | 1.29 | 0.68–2.43 | .43 | 53.0 |
| Subjects number | |||||||||||||||||||||
| <500 | 6 | 0.79 | 0.52–1.18 | .25 | 83.2 | 0.80 | 0.50–1.27 | .34 | 79.2 | 0.75 | 0.40–1.39 | .36 | 44.4 | 0.77 | 0.48–1.25 | .30 | 82.6 | 0.73 | 0.48–1.09 | .13 | 20.5 |
Note: I 2 for Heterogeneity test.
Abbreviations: HB, hospital‐based; HWE, Hardy–Weinberg equilibrium; control; PB, population‐based.
Numbers of comparisons.
FIGURE 2Odd ratios (OR) and 95% confidence interval (CIs) of the associations between peroxisome proliferator‐activated receptor‐γ (PPAR‐γ) rs1801282 C/G polymorphism and ischemic stroke susceptibility (a: GG vs. CC model; b: GG vs. CC+CG model)
FIGURE 3Cumulative meta‐analyses according to publication year on peroxisome proliferator‐activated receptor‐γ (PPAR‐γ) rs1801282 C/G polymorphism and ischemic stroke susceptibility (a: GG vs. CC model; b: GG vs. CC+CG model)
FIGURE 4Sensitivity analysis when each study was removed with publication year on peroxisome proliferator‐activated receptor‐γ (PPAR‐γ) rs1801282 C/G polymorphism and ischemic stroke susceptibility (a: GG vs. CC model; b: GG vs. CC+CG model)
FIGURE 5Funnel plot analysis for detect publication bias on peroxisome proliferator‐activated receptor‐γ (PPAR‐γ) rs1801282 C/G polymorphism and ischemic stroke susceptibility (a: GG vs. CC model; b: GG vs. CC+CG model). Circles represent the weight of the studies