Literature DB >> 34739827

New Type III CRISPR variant and programmable RNA targeting tool: Oh, thank heaven for Cas7-11.

Ryan J Catchpole1, Michael P Terns2.   

Abstract

Özcan et al. (2021) and van Beljouw et al. (2021) characterize a novel Type III-E CRISPR-Cas subtype, composed of a single polypeptide with crRNA processing and sequence-specific RNA cleavage activities, that provides a new RNA knockdown tool for mammalian cells with fewer off-target effects than current technologies.
Copyright © 2021 Elsevier Inc. All rights reserved.

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Year:  2021        PMID： 34739827      PMCID： PMC9009378          DOI： 10.1016/j.molcel.2021.10.014

Source DB:  PubMed          Journal:  Mol Cell        ISSN： 1097-2765            Impact factor:   17.970


  10 in total

Review 1.  Development and applications of CRISPR-Cas9 for genome engineering.

Authors:  Patrick D Hsu; Eric S Lander; Feng Zhang
Journal:  Cell       Date:  2014-06-05       Impact factor: 41.582

2.  The gRAMP CRISPR-Cas effector is an RNA endonuclease complexed with a caspase-like peptidase.

Authors:  Sam P B van Beljouw; Anna C Haagsma; Alicia Rodríguez-Molina; Daan F van den Berg; Jochem N A Vink; Stan J J Brouns
Journal:  Science       Date:  2021-08-26       Impact factor: 47.728

3.  Programmable RNA targeting with the single-protein CRISPR effector Cas7-11.

Authors:  Omar O Abudayyeh; Jonathan S Gootenberg; Ahsen Özcan; Rohan Krajeski; Eleonora Ioannidi; Brennan Lee; Apolonia Gardner; Kira S Makarova; Eugene V Koonin
Journal:  Nature       Date:  2021-09-06       Impact factor: 69.504

4.  RNA editing with CRISPR-Cas13.

Authors:  David B T Cox; Jonathan S Gootenberg; Omar O Abudayyeh; Brian Franklin; Max J Kellner; Julia Joung; Feng Zhang
Journal:  Science       Date:  2017-10-25       Impact factor: 47.728

5.  C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector.

Authors:  Omar O Abudayyeh; Jonathan S Gootenberg; Silvana Konermann; Julia Joung; Ian M Slaymaker; David B T Cox; Sergey Shmakov; Kira S Makarova; Ekaterina Semenova; Leonid Minakhin; Konstantin Severinov; Aviv Regev; Eric S Lander; Eugene V Koonin; Feng Zhang
Journal:  Science       Date:  2016-06-02       Impact factor: 47.728

6.  RNA targeting with CRISPR-Cas13.

Authors:  Omar O Abudayyeh; Jonathan S Gootenberg; Patrick Essletzbichler; Shuo Han; Julia Joung; Joseph J Belanto; Vanessa Verdine; David B T Cox; Max J Kellner; Aviv Regev; Eric S Lander; Daniel F Voytas; Alice Y Ting; Feng Zhang
Journal:  Nature       Date:  2017-10-04       Impact factor: 49.962

Review 7.  CRISPR-Based Technologies: Impact of RNA-Targeting Systems.

Authors:  Michael P Terns
Journal:  Mol Cell       Date:  2018-11-01       Impact factor: 17.970

Review 8.  Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants.

Authors:  Kira S Makarova; Yuri I Wolf; Jaime Iranzo; Sergey A Shmakov; Omer S Alkhnbashi; Stan J J Brouns; Emmanuelle Charpentier; David Cheng; Daniel H Haft; Philippe Horvath; Sylvain Moineau; Francisco J M Mojica; David Scott; Shiraz A Shah; Virginijus Siksnys; Michael P Terns; Česlovas Venclovas; Malcolm F White; Alexander F Yakunin; Winston Yan; Feng Zhang; Roger A Garrett; Rolf Backofen; John van der Oost; Rodolphe Barrangou; Eugene V Koonin
Journal:  Nat Rev Microbiol       Date:  2019-12-19       Impact factor: 60.633

9.  Cas13-induced cellular dormancy prevents the rise of CRISPR-resistant bacteriophage.

Authors:  Alexander J Meeske; Sandra Nakandakari-Higa; Luciano A Marraffini
Journal:  Nature       Date:  2019-05-29       Impact factor: 49.962

10.  The CRISPR-Cas13a Gene-Editing System Induces Collateral Cleavage of RNA in Glioma Cells.

Authors:  Qixue Wang; Xing Liu; Junhu Zhou; Chao Yang; Guangxiu Wang; Yanli Tan; Ye Wu; Sijing Zhang; Kaikai Yi; Chunsheng Kang
Journal:  Adv Sci (Weinh)       Date:  2019-08-29       Impact factor: 16.806
  10 in total
  2 in total

1.  Type III-A CRISPR systems as a versatile gene knockdown technology.

Authors:  Walter T Woodside; Nikita Vantsev; Ryan J Catchpole; Sandra C Garrett; Sara Olson; Brenton R Graveley; Michael P Terns
Journal:  RNA       Date:  2022-05-26       Impact factor: 5.636

2.  An Easy-to-Use Plasmid Toolset for Efficient Generation and Benchmarking of Synthetic Small RNAs in Bacteria.

Authors:  Tania S Köbel; Rafael Melo Palhares; Christin Fromm; Witold Szymanski; Georgia Angelidou; Timo Glatter; Jens Georg; Bork A Berghoff; Daniel Schindler
Journal:  ACS Synth Biol       Date:  2022-08-31       Impact factor: 5.249
  2 in total

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