Literature DB >> 30388409

CRISPR-Based Technologies: Impact of RNA-Targeting Systems.

Michael P Terns1.   

Abstract

DNA-targeting CRISPR-Cas systems, such as those employing the RNA-guided Cas9 or Cas12 endonucleases, have revolutionized our ability to predictably edit genomes and control gene expression. Here, I summarize information on RNA-targeting CRISPR-Cas systems and describe recent advances in converting them into powerful and programmable RNA-binding and cleavage tools with a wide range of novel and important biotechnological and biomedical applications.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CRISPR; Cas10; Cas13; Cas9; RNA editing; RNA targeting; Type III CRISPR-Cas systems; Type VI CRISPR-Cas systems; gene editing

Mesh：

Substances：

Year:  2018        PMID： 30388409      PMCID： PMC6239212          DOI： 10.1016/j.molcel.2018.09.018

Source DB:  PubMed          Journal:  Mol Cell        ISSN： 1097-2765            Impact factor:   17.970


  78 in total

1.  Crystal structure of the CRISPR-Cas RNA silencing Cmr complex bound to a target analog.

Authors:  Takuo Osawa; Hideko Inanaga; Chikara Sato; Tomoyuki Numata
Journal:  Mol Cell       Date:  2015-04-23       Impact factor: 17.970

2.  Structure of an RNA silencing complex of the CRISPR-Cas immune system.

Authors:  Michael Spilman; Alexis Cocozaki; Caryn Hale; Yaming Shao; Nancy Ramia; Rebeca Terns; Michael Terns; Hong Li; Scott Stagg
Journal:  Mol Cell       Date:  2013-10-10       Impact factor: 17.970

3.  Degradation of Phage Transcripts by CRISPR-Associated RNases Enables Type III CRISPR-Cas Immunity.

Authors:  Wenyan Jiang; Poulami Samai; Luciano A Marraffini
Journal:  Cell       Date:  2016-02-04       Impact factor: 41.582

Review 4.  CRISPR-based technologies: prokaryotic defense weapons repurposed.

Authors:  Rebecca M Terns; Michael P Terns
Journal:  Trends Genet       Date:  2014-02-18       Impact factor: 11.639

5.  Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems.

Authors:  Sergey Shmakov; Omar O Abudayyeh; Kira S Makarova; Yuri I Wolf; Jonathan S Gootenberg; Ekaterina Semenova; Leonid Minakhin; Julia Joung; Silvana Konermann; Konstantin Severinov; Feng Zhang; Eugene V Koonin
Journal:  Mol Cell       Date:  2015-10-22       Impact factor: 17.970

6.  CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA.

Authors:  Luciano A Marraffini; Erik J Sontheimer
Journal:  Science       Date:  2008-12-19       Impact factor: 47.728

7.  Programmable RNA Tracking in Live Cells with CRISPR/Cas9.

Authors:  David A Nelles; Mark Y Fang; Mitchell R O'Connell; Jia L Xu; Sebastian J Markmiller; Jennifer A Doudna; Gene W Yeo
Journal:  Cell       Date:  2016-03-17       Impact factor: 41.582

Review 8.  An updated evolutionary classification of CRISPR-Cas systems.

Authors:  Kira S Makarova; Yuri I Wolf; Omer S Alkhnbashi; Fabrizio Costa; Shiraz A Shah; Sita J Saunders; Rodolphe Barrangou; Stan J J Brouns; Emmanuelle Charpentier; Daniel H Haft; Philippe Horvath; Sylvain Moineau; Francisco J M Mojica; Rebecca M Terns; Michael P Terns; Malcolm F White; Alexander F Yakunin; Roger A Garrett; John van der Oost; Rolf Backofen; Eugene V Koonin
Journal:  Nat Rev Microbiol       Date:  2015-09-28       Impact factor: 60.633

9.  RNA targeting by the type III-A CRISPR-Cas Csm complex of Thermus thermophilus.

Authors:  Raymond H J Staals; Yifan Zhu; David W Taylor; Jack E Kornfeld; Kundan Sharma; Arjan Barendregt; Jasper J Koehorst; Marnix Vlot; Nirajan Neupane; Koen Varossieau; Keiko Sakamoto; Takehiro Suzuki; Naoshi Dohmae; Shigeyuki Yokoyama; Peter J Schaap; Henning Urlaub; Albert J R Heck; Eva Nogales; Jennifer A Doudna; Akeo Shinkai; John van der Oost
Journal:  Mol Cell       Date:  2014-11-06       Impact factor: 17.970

10.  Staphylococcus epidermidis Csm1 is a 3'-5' exonuclease.

Authors:  Nancy F Ramia; Li Tang; Alexis I Cocozaki; Hong Li
Journal:  Nucleic Acids Res       Date:  2013-10-10       Impact factor: 16.971
View more
  43 in total

1.  The Need for Speed: Run-On Oligomer Filament Formation Provides Maximum Speed with Maximum Sequestration of Activity.

Authors:  Claudia J Barahona; L Emilia Basantes; Kassidy J Tompkins; Desirae M Heitman; Barbara I Chukwu; Juan Sanchez; Jonathan L Sanchez; Niloofar Ghadirian; Chad K Park; N C Horton
Journal:  J Virol       Date:  2019-02-19       Impact factor: 5.103

2.  Programmable RNA-Guided RNA Effector Proteins Built from Human Parts.

Authors:  Simone Rauch; Emily He; Michael Srienc; Huiqing Zhou; Zijie Zhang; Bryan C Dickinson
Journal:  Cell       Date:  2019-06-20       Impact factor: 41.582

Review 3.  Programmable RNA manipulation in living cells.

Authors:  Yu Pei; Mingxing Lu
Journal:  Cell Mol Life Sci       Date:  2019-07-31       Impact factor: 9.261

4.  RNA Interference: Story and Mechanisms.

Authors:  Mouldy Sioud
Journal:  Methods Mol Biol       Date:  2021

5.  Target sequence requirements of a type III-B CRISPR-Cas immune system.

Authors:  Kaitlin Johnson; Brian A Learn; Michael A Estrella; Scott Bailey
Journal:  J Biol Chem       Date:  2019-05-19       Impact factor: 5.157

6.  CRISPR-Cas13 Inhibitors Block RNA Editing in Bacteria and Mammalian Cells.

Authors:  Ping Lin; Shugang Qin; Qinqin Pu; Zhihan Wang; Qun Wu; Pan Gao; Jacob Schettler; Kai Guo; Rongpeng Li; Guoping Li; Canhua Huang; Yuquan Wei; George Fu Gao; Jianxin Jiang; Min Wu
Journal:  Mol Cell       Date:  2020-04-28       Impact factor: 17.970

Review 7.  Progress towards engineering gene drives for population control.

Authors:  Robyn R Raban; John M Marshall; Omar S Akbari
Journal:  J Exp Biol       Date:  2020-02-07       Impact factor: 3.312

8.  CRISPR tool scales up to interrogate a huge line-up of viral suspects.

Authors:  Gregory A Storch
Journal:  Nature       Date:  2020-06       Impact factor: 49.962

9.  It takes two (Las1 HEPN endoribonuclease domains) to cut RNA correctly.

Authors:  Monica C Pillon; Kevin H Goslen; Jacob Gordon; Melissa L Wells; Jason G Williams; Robin E Stanley
Journal:  J Biol Chem       Date:  2020-03-27       Impact factor: 5.157

10.  CBRPP: a new RNA-centric method to study RNA-protein interactions.

Authors:  Yunfei Li; Shengde Liu; Lili Cao; Yujie Luo; Hongqiang Du; Siji Li; Zeming Zhang; Xuefei Guo; Wenmin Tian; Catherine Cl Wong; Fuping You
Journal:  RNA Biol       Date:  2021-02-17       Impact factor: 4.652
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.