| Literature DB >> 34725369 |
Pilar López-Cotarelo1,2, Adela González-Jiménez1,2, Laura Espino-Paisán3,4, Elena Urcelay1,2, Teresa Agudo-Jiménez1, Judith Abarca-Zabalía1, Yolanda Aladro5, Belén Pilo5, Manuel Comabella6,2.
Abstract
One of the 233 polymorphisms associated with multiple sclerosis (MS) susceptibility lies within the NDFIP1 gene, and it was previously identified as eQTL in healthy controls. NDFIP1 shows interesting immune functions and is involved in the development of the central nervous system. We aimed at studying the NDFIP1 variant on activation and metabolism of immune cells. NDFIP1 mRNA and protein expression were assessed in PBMCs by qPCR and western blot in 87 MS patients and 84 healthy controls genotyped for rs4912622. Immune activation after PHA stimulation was evaluated by CD69 upregulation, and metabolic function of both basal and PHA-activated lymphocytes was studied by Seahorse Xfp-Analyzer. In minor-allele homozygous controls but not in patients, we found higher NDFIP1 expression, significantly reduced protein levels, and CD69 upregulation in B- and T-cells. PBMCs from minor-allele homozygous controls showed significantly higher basal mitochondrial respiration and ATP production compared to major-allele carriers, while minor-allele homozygous patients showed significantly lower metabolic activity than carriers of the major allele. In conclusion, we describe associations in minor-allele homozygous controls with lower levels of NDFIP1 protein, CD69 upregulation, and raised mitochondrial activity, which are not replicated in MS patients, suggesting a NDFIP1 differential effect in health and disease.Entities:
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Year: 2021 PMID: 34725369 PMCID: PMC8560952 DOI: 10.1038/s41598-021-00528-8
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Roadmap epigenomics output for rs4912622. Chromatin structure and main epigenetic marks in the region surrounding rs4912622. Adapted from the Roadmap epigenomics project (http://www.roadmapepigenomics.org/).
Figure 2Differential effect of rs4912622 genotypes on NDFIP1 mRNA and protein expression. (A) NDFIP1 expression in healthy donors (n = 83) and MS patients (n = 87). (B) Allele specific effect of rs4912622 on NDFIP1 expression (control AA + AG: n = 71; control GG: n = 13; MS AA + AG: n = 77; MS GG: n = 10). (C) Effect of rs4912622 on NDFIP1 protein level (control AA + AG: n = 12; control GG: n = 4; MS AA + AG: n = 16; MS GG: n = 4). Means ± standard deviation are shown. (D) Western blot of NDFIP1 with an individual of each genotype group included in (C). Full-length blots are presented in Supplementary Fig. 1.
Figure 3Lymphocyte activation in healthy controls and MS patients stratified by rs4912622 genotype. Effect of rs4912622 genotypes on surface expression of CD69 in (A) CD3+ CD20- lymphocytes (control AA + AG: n = 11; control GG: n = 5; MS AA + AG: n = 16; MS GG: n = 8); (B) CD3- CD20+ (control AA + AG: n = 10; control GG: n = 5; MS AA + AG: n = 15; MS GG: n = 6). (C) CD3-CD20- (control AA + AG: n = 10; control GG: n = 5; MS AA + AG: n = 16; MS GG: n = 8). Means of the percentage of cells expressing CD69 ± standard deviation are shown.
Figure 4Effect of rs4912622 on lymphocyte metabolism. (A) Oxygen Consumption Rate (OCR) profile of PBMCs stimulated or not with PHA from controls or MS patients according to their rs4912622 genotype. (B) Energy Phenotype. A zoom out of unstimulated values is shown to improve visibility. (C-G) Basal Respiration (BR), ATP Production, Maximal Respiration (MR), Spare respiratory capacity (SRC), and Glycolytic reserve of unstimulated PBMCs. (H-L) The same parameters as in (C-G) are represented for PBMCs stimulated with PHA. Means ± standard deviations are shown (controls AA + AG: n = 12; controls GG: n = 7; MS AA + AG: n = 21; MS GG: n = 4).