Literature DB >> 34723653

The RNA Helicase Ded1 Regulates Translation and Granule Formation during Multiple Phases of Cellular Stress Responses.

Peyman P Aryanpur1, Telsa M Mittelmeier1, Timothy A Bolger1.   

Abstract

Ded1 is a conserved RNA helicase that promotes translation initiation in steady-state conditions. Ded1 has also been shown to regulate translation during cellular stress and affect the dynamics of stress granules (SGs), accumulations of RNA and protein linked to translation repression. To better understand its role in stress responses, we examined Ded1 function in two different models: DED1 overexpression and oxidative stress. DED1 overexpression inhibits growth and promotes the formation of SGs. A ded1 mutant lacking the low-complexity C-terminal region (ded1-ΔCT), which mediates Ded1 oligomerization and interaction with the translation factor eIF4G1, suppressed these phenotypes, consistent with other stresses. During oxidative stress, a ded1-ΔCT mutant was defective in growth and in SG formation compared to wild-type cells, although SGs were increased rather than decreased in these conditions. Unlike stress induced by direct TOR inhibition, the phenotypes in both models were only partially dependent on eIF4G1 interaction, suggesting an additional contribution from Ded1 oligomerization. Furthermore, examination of the growth defects and translational changes during oxidative stress suggested that Ded1 plays a role during recovery from stress. Integrating these disparate results, we propose that Ded1 controls multiple aspects of translation and RNP dynamics in both initial stress responses and during recovery.

Entities:  

Keywords:  RNA helicase; Saccharomyces cerevisiae; stress granules; stress response; translational control

Mesh:

Substances:

Year:  2021        PMID: 34723653      PMCID: PMC8773058          DOI: 10.1128/MCB.00244-21

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   5.069


  51 in total

1.  Modeling of the bacterial growth curve.

Authors:  M H Zwietering; I Jongenburger; F M Rombouts; K van 't Riet
Journal:  Appl Environ Microbiol       Date:  1990-06       Impact factor: 4.792

2.  Critical roles of RNA helicase DDX3 and its interactions with eIF4E/PABP1 in stress granule assembly and stress response.

Authors:  Jing-Wen Shih; Wei-Ting Wang; Tsung-Yuan Tsai; Chu-Yun Kuo; Hao-Kang Li; Yan-Hwa Wu Lee
Journal:  Biochem J       Date:  2012-01-01       Impact factor: 3.857

3.  Single-Molecule Imaging Reveals Translation of mRNAs Localized to Stress Granules.

Authors:  Daniel Mateju; Bastian Eichenberger; Franka Voigt; Jan Eglinger; Gregory Roth; Jeffrey A Chao
Journal:  Cell       Date:  2020-12-11       Impact factor: 41.582

4.  Gle1 Regulates RNA Binding of the DEAD-Box Helicase Ded1 in Its Complex Role in Translation Initiation.

Authors:  Peyman P Aryanpur; Chelsea A Regan; John M Collins; Telsa M Mittelmeier; David M Renner; Ashley M Vergara; Nicolette P Brown; Timothy A Bolger
Journal:  Mol Cell Biol       Date:  2017-10-13       Impact factor: 4.272

5.  Gle1 is a multifunctional DEAD-box protein regulator that modulates Ded1 in translation initiation.

Authors:  Timothy A Bolger; Susan R Wente
Journal:  J Biol Chem       Date:  2011-09-23       Impact factor: 5.157

Review 6.  Eukaryotic stress granules: the ins and outs of translation.

Authors:  J Ross Buchan; Roy Parker
Journal:  Mol Cell       Date:  2009-12-25       Impact factor: 17.970

7.  The Stress Granule Transcriptome Reveals Principles of mRNA Accumulation in Stress Granules.

Authors:  Anthony Khong; Tyler Matheny; Saumya Jain; Sarah F Mitchell; Joshua R Wheeler; Roy Parker
Journal:  Mol Cell       Date:  2017-11-09       Impact factor: 17.970

8.  Pharmacological inhibition of DEAD-Box RNA Helicase 3 attenuates stress granule assembly.

Authors:  B Celia Cui; Vitali Sikirzhytski; Marina Aksenova; Matthew D Lucius; Gabrielle H Levon; Zachary T Mack; Charlotte Pollack; Diana Odhiambo; Eugenia Broude; Sofia B Lizarraga; Michael D Wyatt; Michael Shtutman
Journal:  Biochem Pharmacol       Date:  2020-10-10       Impact factor: 5.858

9.  P bodies promote stress granule assembly in Saccharomyces cerevisiae.

Authors:  J Ross Buchan; Denise Muhlrad; Roy Parker
Journal:  J Cell Biol       Date:  2008-11-03       Impact factor: 10.539

10.  The DEAD-box helicase Ded1 from yeast is an mRNP cap-associated protein that shuttles between the cytoplasm and nucleus.

Authors:  Meriem Senissar; Agnès Le Saux; Naïma Belgareh-Touzé; Céline Adam; Josette Banroques; N Kyle Tanner
Journal:  Nucleic Acids Res       Date:  2014-07-10       Impact factor: 16.971

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