Literature DB >> 34718557

Dynamic sampling bias and overdispersion induced by skewed offspring distributions.

Takashi Okada1,2, Oskar Hallatschek1.   

Abstract

Natural populations often show enhanced genetic drift consistent with a strong skew in their offspring number distribution. The skew arises because the variability of family sizes is either inherently strong or amplified by population expansions. The resulting allele-frequency fluctuations are large and, therefore, challenge standard models of population genetics, which assume sufficiently narrow offspring distributions. While the neutral dynamics backward in time can be readily analyzed using coalescent approaches, we still know little about the effect of broad offspring distributions on the forward-in-time dynamics, especially with selection. Here, we employ an asymptotic analysis combined with a scaling hypothesis to demonstrate that over-dispersed frequency trajectories emerge from the competition of conventional forces, such as selection or mutations, with an emerging time-dependent sampling bias against the minor allele. The sampling bias arises from the characteristic time-dependence of the largest sampled family size within each allelic type. Using this insight, we establish simple scaling relations for allele-frequency fluctuations, fixation probabilities, extinction times, and the site frequency spectra that arise when offspring numbers are distributed according to a power law.
© The Author(s) 2021. Published by Oxford University Press on behalf of Genetics Society of America. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  fixation probability; jackpot events; multiple mergers; natural selection; site-frequency spectrum; stationary distribution; traveling waves; Λ-coalescent

Mesh:

Year:  2021        PMID: 34718557      PMCID: PMC8664600          DOI: 10.1093/genetics/iyab135

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.402


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