| Literature DB >> 34709626 |
Shicheng Yu1,2,3, Chaoran Zheng3, Jeffrey Shih-Chieh Chu4.
Abstract
Genetic balancer systems, which allow effective capture and maintenance of lethal mutations stably, play an important role in identifying essential genes. Whole-genome sequencing (WGS) followed by bioinformatics analysis, combined with genetic mapping data analysis, allows for an efficient and economical means of identifying genomic mutations in essential genes. Using this approach, we successfully identified 104 essential genes on ChrI, ChrIII, and ChrV in C. elegans. In this report, we described a protocol that sequences the genome of prebalanced Caenorhabditis elegans (C. elegans) strains to carry lethal mutations and identifies candidate causal mutations and candidate essential genes using a robust bioinformatics procedure.Entities:
Keywords: Balancer; Duplication; Essential gene; Illumina sequencing; Translocation
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Year: 2022 PMID: 34709626 DOI: 10.1007/978-1-0716-1720-5_19
Source DB: PubMed Journal: Methods Mol Biol ISSN: 1064-3745