Literature DB >> 34707241

Plant and animal small RNA communications between cells and organisms.

Xuemei Chen1, Oded Rechavi2,3.   

Abstract

Since the discovery of eukaryotic small RNAs as the main effectors of RNA interference in the late 1990s, diverse types of endogenous small RNAs have been characterized, most notably microRNAs, small interfering RNAs (siRNAs) and PIWI-interacting RNAs (piRNAs). These small RNAs associate with Argonaute proteins and, through sequence-specific gene regulation, affect almost every major biological process. Intriguing features of small RNAs, such as their mechanisms of amplification, rapid evolution and non-cell-autonomous function, bestow upon them the capacity to function as agents of intercellular communications in development, reproduction and immunity, and even in transgenerational inheritance. Although there are many types of extracellular small RNAs, and despite decades of research, the capacity of these molecules to transmit signals between cells and between organisms is still highly controversial. In this Review, we discuss evidence from different plants and animals that small RNAs can act in a non-cell-autonomous manner and even exchange information between species. We also discuss mechanistic insights into small RNA communications, such as the nature of the mobile agents, small RNA signal amplification during transit, signal perception and small RNA activity at the destination.
© 2021. Springer Nature Limited.

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Year:  2021        PMID: 34707241      PMCID: PMC9208737          DOI: 10.1038/s41580-021-00425-y

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   113.915


  252 in total

1.  Arabidopsis Argonaute10 specifically sequesters miR166/165 to regulate shoot apical meristem development.

Authors:  Hongliang Zhu; Fuqu Hu; Ronghui Wang; Xin Zhou; Sing-Hoi Sze; Lisa Wen Liou; Ashley Barefoot; Martin Dickman; Xiuren Zhang
Journal:  Cell       Date:  2011-04-15       Impact factor: 41.582

2.  Arabidopsis RNA Polymerase IV generates 21-22 nucleotide small RNAs that can participate in RNA-directed DNA methylation and may regulate genes.

Authors:  Kaushik Panda; Andrea D McCue; R Keith Slotkin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-02-10       Impact factor: 6.237

3.  Conserved tyrosine kinase promotes the import of silencing RNA into Caenorhabditis elegans cells.

Authors:  Antony M Jose; Yunsoo A Kim; Steven Leal-Ekman; Craig P Hunter
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-21       Impact factor: 11.205

4.  Rice germline-specific Argonaute MEL1 protein binds to phasiRNAs generated from more than 700 lincRNAs.

Authors:  Reina Komiya; Hajime Ohyanagi; Mitsuru Niihama; Toshiaki Watanabe; Mutsuko Nakano; Nori Kurata; Ken-Ichi Nonomura
Journal:  Plant J       Date:  2014-04-15       Impact factor: 6.417

5.  Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis.

Authors:  Noah Fahlgren; Taiowa A Montgomery; Miya D Howell; Edwards Allen; Sarah K Dvorak; Amanda L Alexander; James C Carrington
Journal:  Curr Biol       Date:  2006-05-09       Impact factor: 10.834

6.  A systemic small RNA signaling system in plants.

Authors:  Byung-Chun Yoo; Friedrich Kragler; Erika Varkonyi-Gasic; Valerie Haywood; Sarah Archer-Evans; Young Moo Lee; Tony J Lough; William J Lucas
Journal:  Plant Cell       Date:  2004-07-16       Impact factor: 11.277

7.  Plant Extracellular Vesicles Contain Diverse Small RNA Species and Are Enriched in 10- to 17-Nucleotide "Tiny" RNAs.

Authors:  Patricia Baldrich; Brian D Rutter; Hana Zand Karimi; Ram Podicheti; Blake C Meyers; Roger W Innes
Journal:  Plant Cell       Date:  2019-01-31       Impact factor: 11.277

Review 8.  The expanding world of small RNAs in plants.

Authors:  Filipe Borges; Robert A Martienssen
Journal:  Nat Rev Mol Cell Biol       Date:  2015-11-04       Impact factor: 94.444

9.  piRNAs initiate an epigenetic memory of nonself RNA in the C. elegans germline.

Authors:  Masaki Shirayama; Meetu Seth; Heng-Chi Lee; Weifeng Gu; Takao Ishidate; Darryl Conte; Craig C Mello
Journal:  Cell       Date:  2012-06-25       Impact factor: 41.582

10.  The THO Complex Non-Cell-Autonomously Represses Female Germline Specification through the TAS3-ARF3 Module.

Authors:  Zhenxia Su; Lihua Zhao; Yuanyuan Zhao; Shaofang Li; SoYoun Won; Hanyang Cai; Lulu Wang; Zhenfang Li; Piaojuan Chen; Yuan Qin; Xuemei Chen
Journal:  Curr Biol       Date:  2017-05-25       Impact factor: 10.834

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  10 in total

1.  Mobile ARGONAUTE 1d binds 22-nt miRNAs to generate phasiRNAs important for low-temperature male fertility in rice.

Authors:  Fuyan Si; Haofei Luo; Chao Yang; Jie Gong; Bin Yan; Chunyan Liu; Xianwei Song; Xiaofeng Cao
Journal:  Sci China Life Sci       Date:  2022-10-11       Impact factor: 10.372

Review 2.  The Mobile Small RNAs: Important Messengers for Long-Distance Communication in Plants.

Authors:  Yan Yan; Byung-Kook Ham
Journal:  Front Plant Sci       Date:  2022-06-17       Impact factor: 6.627

3.  Hierarchical self-uncloaking CRISPR-Cas13a-customized RNA nanococoons for spatial-controlled genome editing and precise cancer therapy.

Authors:  Ningke Fan; Xintong Bian; Meng Li; Junman Chen; Haiping Wu; Qiling Peng; Huijie Bai; Wenqian Cheng; Liangsheng Kong; Shijia Ding; Siqiao Li; Wei Cheng
Journal:  Sci Adv       Date:  2022-05-18       Impact factor: 14.957

Review 4.  The Intersection of Non-Coding RNAs Contributes to Forest Trees' Response to Abiotic Stress.

Authors:  Dandan Xiao; Min Chen; Xiaoqian Yang; Hai Bao; Yuzhang Yang; Yanwei Wang
Journal:  Int J Mol Sci       Date:  2022-06-07       Impact factor: 6.208

5.  Microtubules promote the non-cell autonomous action of microRNAs by inhibiting their cytoplasmic loading onto ARGONAUTE1 in Arabidopsis.

Authors:  Lusheng Fan; Cui Zhang; Bin Gao; Yong Zhang; Ethan Stewart; Jakub Jez; Keiji Nakajima; Xuemei Chen
Journal:  Dev Cell       Date:  2022-04-15       Impact factor: 13.417

Review 6.  Function and Regulation of microRNA171 in Plant Stem Cell Homeostasis and Developmental Programing.

Authors:  Han Han; Yun Zhou
Journal:  Int J Mol Sci       Date:  2022-02-25       Impact factor: 5.923

Review 7.  Studies on Viroid Shed Light on the Role of RNA Three-Dimensional Structural Motifs in RNA Trafficking in Plants.

Authors:  Junfei Ma; Ying Wang
Journal:  Front Plant Sci       Date:  2022-03-23       Impact factor: 5.753

Review 8.  microRNAs and Their Roles in Plant Development.

Authors:  Qingkun Dong; Binbin Hu; Cui Zhang
Journal:  Front Plant Sci       Date:  2022-02-18       Impact factor: 5.753

9.  Verticillium dahliae Secretes Small RNA to Target Host MIR157d and Retard Plant Floral Transition During Infection.

Authors:  Bo-Sen Zhang; Ying-Chao Li; Hui-Shan Guo; Jian-Hua Zhao
Journal:  Front Plant Sci       Date:  2022-04-18       Impact factor: 6.627

Review 10.  Circulating MicroRNAs as Potential Diagnostic Biomarkers for Diabetic Retinopathy: A Meta-Analysis.

Authors:  Lingli Ma; Yan Wen; Zimeng Li; Nan Wu; Qing Wang
Journal:  Front Endocrinol (Lausanne)       Date:  2022-07-08       Impact factor: 6.055

  10 in total

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