Literature DB >> 34697801

Dynamic logistic state space prediction model for clinical decision making.

Jiakun Jiang1, Wei Yang2, Erin M Schnellinger2, Stephen E Kimmel3, Wensheng Guo2.   

Abstract

Prediction modeling for clinical decision making is of great importance and needed to be updated frequently with the changes of patient population and clinical practice. Existing methods are either done in an ad hoc fashion, such as model recalibration or focus on studying the relationship between predictors and outcome and less so for the purpose of prediction. In this article, we propose a dynamic logistic state space model to continuously update the parameters whenever new information becomes available. The proposed model allows for both time-varying and time-invariant coefficients. The varying coefficients are modeled using smoothing splines to account for their smooth trends over time. The smoothing parameters are objectively chosen by maximum likelihood. The model is updated using batch data accumulated at prespecified time intervals, which allows for better approximation of the underlying binomial density function. In the simulation, we show that the new model has significantly higher prediction accuracy compared to existing methods. We apply the method to predict 1 year survival after lung transplantation using the United Network for Organ Sharing data.
© 2021 The International Biometric Society.

Entities:  

Keywords:  Laplace approximation; dynamic prediction; smoothing spline

Year:  2021        PMID: 34697801      PMCID: PMC9038961          DOI: 10.1111/biom.13593

Source DB:  PubMed          Journal:  Biometrics        ISSN: 0006-341X            Impact factor:   1.701


  35 in total

Review 1.  Extracorporeal life support as a bridge to lung transplantation.

Authors:  Marcelo Cypel; Shaf Keshavjee
Journal:  Clin Chest Med       Date:  2011-06       Impact factor: 2.878

2.  Impact of a lung transplantation donor-management protocol on lung donation and recipient outcomes.

Authors:  Luis F Angel; Deborah J Levine; Marcos I Restrepo; Scott Johnson; Edward Sako; Andrea Carpenter; John Calhoon; John E Cornell; Sandra G Adams; Gary B Chisholm; Joe Nespral; Ann Roberson; Stephanie M Levine
Journal:  Am J Respir Crit Care Med       Date:  2006-06-23       Impact factor: 21.405

Review 3.  Validation, updating and impact of clinical prediction rules: a review.

Authors:  D B Toll; K J M Janssen; Y Vergouwe; K G M Moons
Journal:  J Clin Epidemiol       Date:  2008-11       Impact factor: 6.437

4.  Obesity and primary graft dysfunction after lung transplantation: the Lung Transplant Outcomes Group Obesity Study.

Authors:  David J Lederer; Steven M Kawut; Nancy Wickersham; Christopher Winterbottom; Sangeeta Bhorade; Scott M Palmer; James Lee; Joshua M Diamond; Keith M Wille; Ann Weinacker; Vibha N Lama; Maria Crespo; Jonathan B Orens; Joshua R Sonett; Selim M Arcasoy; Lorraine B Ware; Jason D Christie
Journal:  Am J Respir Crit Care Med       Date:  2011-11-01       Impact factor: 21.405

5.  Development of the new lung allocation system in the United States.

Authors:  T M Egan; S Murray; R T Bustami; T H Shearon; K P McCullough; L B Edwards; M A Coke; E R Garrity; S C Sweet; D A Heiney; F L Grover
Journal:  Am J Transplant       Date:  2006       Impact factor: 8.086

6.  An acute change in lung allocation score and survival after lung transplantation: a cohort study.

Authors:  Wayne M Tsuang; David M Vock; C Ashley Finlen Copeland; David J Lederer; Scott M Palmer
Journal:  Ann Intern Med       Date:  2013-05-07       Impact factor: 25.391

7.  Updating methods improved the performance of a clinical prediction model in new patients.

Authors:  K J M Janssen; K G M Moons; C J Kalkman; D E Grobbee; Y Vergouwe
Journal:  J Clin Epidemiol       Date:  2007-11-26       Impact factor: 6.437

Review 8.  Extracorporeal life support as bridge to lung transplantation: a systematic review.

Authors:  Davide Chiumello; Silvia Coppola; Sara Froio; Andrea Colombo; Lorenzo Del Sorbo
Journal:  Crit Care       Date:  2015-01-22       Impact factor: 9.097

9.  Dynamic prediction modeling approaches for cardiac surgery.

Authors:  Graeme L Hickey; Stuart W Grant; Camila Caiado; Simon Kendall; Joel Dunning; Michael Poullis; Iain Buchan; Ben Bridgewater
Journal:  Circ Cardiovasc Qual Outcomes       Date:  2013-10-22

Review 10.  Prognosis Research Strategy (PROGRESS) 3: prognostic model research.

Authors:  Ewout W Steyerberg; Karel G M Moons; Danielle A van der Windt; Jill A Hayden; Pablo Perel; Sara Schroter; Richard D Riley; Harry Hemingway; Douglas G Altman
Journal:  PLoS Med       Date:  2013-02-05       Impact factor: 11.069

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