Literature DB >> 34692902

Cell-free Translation: Preparation and Validation of Translation-competent Extracts from Saccharomyces cerevisiae.

Brandon M Trainor1,2, Anton A Komar3, Dimitri G Pestov1, Natalia Shcherbik1.   

Abstract

Cell-free translation is a powerful technique for in vitro protein synthesis. While cell-free translation platforms prepared from bacterial, plant, and mammalian cells are commercially available, yeast-based translation systems remain proprietary knowledge of individual labs. Here, we provide a detailed protocol for simple, fast, and cost-effective preparation of the translation-competent cell-free extract (CFE) from budding yeast. Our protocol streamlines steps combined from different procedures published over the last three decades and incorporates cryogenic lysis of yeast cells to produce a high yield of the translationally active material. We also describe techniques for the validation and troubleshooting of the quality and translational activity of the obtained yeast CFE. Graphic abstract: The flow of Cell-Free Extract (CFE) preparation procedure.
Copyright © 2021 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Cell-free translation; Cryogenic lysis; Gel-filtration; Protein expression; RNA; Saccharomyces cerevisiae

Year:  2021        PMID: 34692902      PMCID: PMC8481029          DOI: 10.21769/BioProtoc.4093

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  36 in total

Review 1.  Cell-free protein synthesis: applications come of age.

Authors:  Erik D Carlson; Rui Gan; C Eric Hodgman; Michael C Jewett
Journal:  Biotechnol Adv       Date:  2011-10-08       Impact factor: 14.227

2.  mRNA-dependent yeast cell-free translation systems: theory and practice.

Authors:  M F Tuite; J Plesset
Journal:  Yeast       Date:  1986-03       Impact factor: 3.239

3.  Cell-free protein expression based on extracts from CHO cells.

Authors:  Andreas K Brödel; Andrei Sonnabend; Stefan Kubick
Journal:  Biotechnol Bioeng       Date:  2013-09-06       Impact factor: 4.530

4.  A common function for mRNA 5' and 3' ends in translation initiation in yeast.

Authors:  S Z Tarun; A B Sachs
Journal:  Genes Dev       Date:  1995-12-01       Impact factor: 11.361

5.  Optimized extract preparation methods and reaction conditions for improved yeast cell-free protein synthesis.

Authors:  C Eric Hodgman; Michael C Jewett
Journal:  Biotechnol Bioeng       Date:  2013-07-07       Impact factor: 4.530

6.  Establishing a high yielding streptomyces-based cell-free protein synthesis system.

Authors:  Jian Li; He Wang; Yong-Chan Kwon; Michael C Jewett
Journal:  Biotechnol Bioeng       Date:  2017-02-23       Impact factor: 4.530

7.  Preparation of a Saccharomyces cerevisiae cell-free extract for in vitro translation.

Authors:  Cheng Wu; Matthew S Sachs
Journal:  Methods Enzymol       Date:  2014       Impact factor: 1.600

8.  Translation of homologous and heterologous messenger RNAs in a yeast cell-free system.

Authors:  I Hussain; M J Leibowitz
Journal:  Gene       Date:  1986       Impact factor: 3.688

9.  One-step hot formamide extraction of RNA from Saccharomyces cerevisiae.

Authors:  Daniel Shedlovskiy; Natalia Shcherbik; Dimitri G Pestov
Journal:  RNA Biol       Date:  2017-07-31       Impact factor: 4.652

10.  Elimination of Ribosome Inactivating Factors Improves the Efficiency of Bacillus subtilis and Saccharomyces cerevisiae Cell-Free Translation Systems.

Authors:  Tetiana Brodiazhenko; Marcus J O Johansson; Hiraku Takada; Tracy Nissan; Vasili Hauryliuk; Victoriia Murina
Journal:  Front Microbiol       Date:  2018-12-18       Impact factor: 5.640

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  1 in total

1.  Development, validation, and application of the ribosome separation and reconstitution system for protein translation in vitro.

Authors:  Brandon M Trainor; Dimitri G Pestov; Natalia Shcherbik
Journal:  RNA       Date:  2021-08-27       Impact factor: 4.942

  1 in total

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