| Literature DB >> 34680051 |
Valentina S Evsiukova1, Elizabeth A Kulikova1, Alexander V Kulikov2.
Abstract
Short-lived turquoise killifish (Nothobranchius furzeri) have become a popular model organism for neuroscience. In the present paper we study for the first time their behavior in the novel tank diving test and the levels of mRNA of various 5-HT-related genes in brains of 2-, 4- and 6-month-old males and females of N. furzeri. The marked effect of age on body mass, locomotor activity and the mRNA level of Tph1b, Tph2, Slc6a4b, Mao, Htr1aa, Htr2a, Htr3a, Htr3b, Htr4, Htr6 genes in the brains of N. furzeri males was shown. Locomotor activity and expression of the Mao gene increased, while expression of Tph1b, Tph2, Slc6a4b, Htr1aa, Htr2a, Htr3a, Htr3b, Htr4, Htr6 genes decreased in 6-month-old killifish. Significant effects of sex on body mass as well as on mRNA level of Tph1a, Tph1b, Tph2, Slc6a4b, Htr1aa, 5-HT2a, Htr3a, Htr3b, Htr4, and Htr6 genes were revealed: in general both the body mass and the expression of these genes were higher in males. N. furzeri is a suitable model with which to study the fundamental problems of age-related alterations in various mRNA levels related with the brains 5-HT system.Entities:
Keywords: aging; brain; gene expression; monoamine oxidase; novel tank diving test; serotonin receptors; serotonin transporter; sexual dimorphism; tryptophan hydroxylase; turquoise killifish
Mesh:
Substances:
Year: 2021 PMID: 34680051 PMCID: PMC8533623 DOI: 10.3390/biom11101421
Source DB: PubMed Journal: Biomolecules ISSN: 2218-273X
Sequences and annealing temperatures of the primers.
| Gene | Primer Sequences | Annealing Temperatures, °C |
|---|---|---|
|
| F 5′-ctgtgccatgatcgaggttac-3′ | 64 |
|
| F 5′-agtttgccaagaccatcaag-3′ | 60 |
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| F 5′-agcactcaggtttcagcattc-3′ | 63 |
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| F 5′-acgaacgtctttcagtcccatc-3′ | 64 |
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| F 5′-ttctcagtaacatgactcaacacttg-3′ | 63 |
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| F 5′-agacggattccagggacaag-3′ | 63 |
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| F 5′-ggaactttcatcgtgtgctgg-3′ | 64 |
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| F 5′-tggtgtccatcctggtaatgc-3′ | 64 |
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| F 5′-atggatttcttcaactggactgaag-3′ | 63 |
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| F 5′-cctttgttgccttctttgttcc-3′ | 62 |
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| F 5′-tggaccttaacctaacccagc-3′ | 63 |
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| F 5′-ttgtacgtctggtccacaagc-3′ | 64 |
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| F 5′-gttctttgtggtgtgcatggc-3′ | 64 |
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| F 5′-ccaactatttcatcgtgtccctg-3′ | 63 |
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| F 5′-caggtctggatctcatttgacg-3′ | 62 |
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| F 5′-ctagaccgttacctcttcatcatc-3′ | 62 |
|
|
F 5′-gtactacaagatattcagggcagc-3′ | 63 |
Figure 1Body mass of two-, four-, and six-month old males and females N. furzeri. ** p < 0.01 vs. two-month-old males, ### p < 0.001 vs. males of the same age.
Two-way ANOVA of the effect of “Age”, “Sex” factors and their interaction on the variability of behavior of N. furzeri in the novel tank diving test.
| Trait | Age | Sex | Interaction |
|---|---|---|---|
| Distance traveled, cm |
| F1,58 = 2.89, | F2,58 < 1 |
| Immobility time, % | F2,58 = 3.12, |
| F2,58 < 1 |
| Explored part, % | F2,58 = 3.0, | F1,58 = 1.74, | F2,58 < 1 |
| Distance from the bottom, cm |
| F1,58 < 1 | F2,58 < 1 |
| Time in the lower third, % | F2,58 = 2.98, | F1,58 < 1 | F2,58 < 1 |
| Time in the upper third, % | F2,58 = 2.42, | F1,58 < 1 | F2,58 < 1 |
Statistically significant values are marked in bold.
Figure 2Distance travelled (cm), immobility time (%), explored part of the tank (%), mean distance from the tank’s bottom (cm), time spent (%) in the lower and upper third of the tank in the novel tank diving test in two-, four- and six-month-old males and females N. furzeri. $ p < 0.05, $$ p < 0.01 vs. four-month-old males, # p < 0.05 vs. males of the same age.
Factor loadings (correlation coefficients) for travelled distance, immobility time, distance from the tank’s bottom, explored part of the tank, time spent in the lower and upper thirds of the tank in two-, four- and six-month-old males of N. furzeri.
| Trait | Factor 1 (51.9%) | Factor 2 (40.8%) |
|---|---|---|
| Distance traveled, cm | r = −0.10, |
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| Immobility time, % | r = 0.10, |
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| Explored part, % | r = −0.40, |
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| Distance from the bottom, cm |
| r = 0.05, |
| Time in the lower third, % |
| r = 0.0, |
| Time in the upper third, % |
| r = 0.0, |
Statistically significant values are marked in bold.
Figure 3Individual scores for eleven two-month-old, eleven four-month-old, and twelve six-month-old males of N. furzeri along two factors yielded by the principal component analysis. These factors generalize six behavioral traits in the novel tank diving test. Factor 1 loads the anxiety-related traits such as distance from the tank’s bottom and time spent in the lower and upper thirds. Factor 2 loads the traits corresponding to locomotor and exploratory activities such as travelled distance, immobility time and the explored part of the tank. The coordinates of the two axes represent the factor scores of individual animals. Ten of 11 scores corresponding to four-month-old males are located in the lower half of the graphic, while all 12 scores corresponding to six-month-old males are located in the left half of graphic.
Two-way ANOVA of the effect of “Age”, “Sex” factors and their interaction on the variability of mRNA level of Polr2e, Tph1a, Tph1b, Tph2, Slc6a4b, Mao, Htr1aa, Htr1b, Htr1f, Htr2a, Htr2Cl1, Htr3a, Htr3b, Htr4, Htr5ab, Htr6, and Htr7 genes in the brain of N. furzeri.
| Gene | Age | Sex | Interaction |
|---|---|---|---|
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| F2,54 < 1 | F1,54 < 1 | F2,54 < 1 |
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| F2,54 < 1 |
| F2,54 < 1 |
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| F2,54 = 2.62, |
| F2,54 < 1 |
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| F1,54 = 1.54, | F2,54 < 1 |
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| F2,54 = 2.38, | F1,54 < 1 | F2,54 = 1.25, |
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| F2,54 < 1 | F1,54 < 1 | F2,54 < 1 |
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| F2,54 = 2.98, |
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| F2,54 = 2.15, | F1,54 < 1 | F2,54 = 1.81, |
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| F2,54 = 2.93, |
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| F2,54 = 1.56, | F1,54 = 1.42, | F2,54 = 2.89, |
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| F2,54 = 1.86, |
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| F2,54 = 2.25, | F1,54 < 1 | F2,54 < 1 |
Statistically significant values are marked in bold.
mRNA level of Tph1a, Tph1b, Tph2, Slc6a4b, Mao, Htr1aa, Htr1b, Htr1f, Htr2a, Htr2cl1, Htr3a, Htr3b, Htr4, Htr5ab, Htr6, and Htr7 genes in the brains of two-, four- and six-month-old males and females of N. furzeri.
| Age | 2 Months of Age | 4 Months of Age | 6 Months of Age | |||
|---|---|---|---|---|---|---|
| Sex | Male (11) | Female(8) | Male (12) | Female (9) | Male (12) | Female (8) |
|
| 102.3 ± 3.4 | 80.9 ± 12 # | 96.2 ± 6.8 | 74.9 ± 5.3 # | 106.0 ± 7.5 | 73.0 ± 8.3 ## |
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| 11.1 ± 1.8 | 2.7 ± 0.5 # | 21.6 ± 3.0 ** | 3.1 ± 0.5 ### | 8.4 ± 2.6 $$$ | 4.1 ± 1.1 |
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| 15.4 ± 1.6 | 14.0 ± 0.9 | 24.0 ± 2.4 *** | 11.2 ± 0.7 ### | 16.6 ± 1.9 $$ | 11.0 ± 0.7 # |
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| 112.0 ± 5.2 | 106.4 ± 4.1 | 129.3 ± 5.1 * | 125.0 ± 4.8 & | 135.5 ± 5.2 ** | 128.9 ± 7.1 && |
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| 12.6 ± 1.5 | 5.4 ± 0.6 # | 22.5 ± 3.6 ** | 5.7 ± 0.5 ### | 10.6 ± 2.2 $$ | 7.7 ± 1.3 |
|
| 64.3 ± 2.5 | 66.0 ± 2.2 | 68.8 ± 3.3 | 51.7 ± 2.3 ##,&& | 50.2 ± 2.4 **,$$ | 49.4 ± 3.2 &&& |
|
| 27.5 ± 2.7 | 29.1 ± 2.4 | 35.6 ± 3.3 | 30.0 ± 1.6 | 27.7 ± 1.6 | 28.4 ± 1.9 |
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| 77.6 ± 7.0 | 81.0 ± 10.5 | 86.4 ± 7.3 | 72.0 ± 3.9 | 79.4 ± 3.8 | 74.0 ± 7.9 |
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| 62.7 ± 2.1 | 75.3 ± 3.9 ## | 77.3 ± 2.1 *** | 72.9 ± 3.6 | 63.2 ± 2.4 $$$ | 72.8 ± 5.7 # |
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| 81.7 ± 3.5 | 87.3 ± 5.9 | 88.9 ± 4.9 | 78.8 ± 3.4 | 76.2 ± 3.1 | 76.8 ± 4.1 |
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| 21.3 ± 2.7 | 13.9 ± 1.6 | 44.0 ± 6.7 *** | 12.6 ± 0.9 ### | 24.1 ± 5.0 $$$ | 13.7 ± 1.4 ### |
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| 13.5 ± 2.3 | 4.3 ± 0.9 # | 26.7 ± 4.8 ** | 4.9 ± 0.8 ### | 9.3 ± 2.8 $$$ | 4.6 ± 0.7 |
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| 35.1 ± 1.7 | 32.7 ± 1.9 | 39.2 ± 3.4 | 25.2 ± 2.7 ### | 29.7 ± 2.1 $$ | 26.2 ± 1.5 |
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| 45.3 ± 1.3 | 50.1 ± 1.8 | 55.3 ± 3.4 | 46.1 ± 2.1 | 46.8 ± 2.5 | 45.6 ± 2.8 |
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| 15.0 ± 1.8 | 9.0 ± 1.6 | 26.9 ± 4.2 *** | 13.0 ± 0.6 ### | 16.3 ± 2.1 $$ | 11.6 ± 1.9 |
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| 31.4 ± 3.4 | 33.1 ± 3.0 | 41.1 ± 3.5 | 35.2 ± 1.4 | 37.5 ± 2.1 | 35.2 ± 2.0 |
The data are presented as copies number of target gene/100 copies of Polr2e gene (internal standard). * p < 0.05, ** p < 0.01, *** p < 0.01 vs. two-month-old males; $$ p < 0.01, $$$ p < 0.001 vs. four-month-old males; # p < 0.05, ## p < 0.01, ### p < 0.001 vs. males of the same age; & p < 0.05, && p < 0.01, &&& p < 0.01 vs. two-month-old females.
Factor loadings for mRNA levels of Tph1a, Tph1b, Tph2, Slc6a4b, Mao, Htr1aa, Htr1b, Htr1f, Htr2a, Htr2cl1, Htr3b, Htr4, Htr5ab, Htr6, and Htr7 genes in the brain of two-, four- and six-month-old males of N. furzeri.
| Gene | Factor 1 (56.3%) | Factor 2 (17.3%) | Factor 3 (8.9%) |
|---|---|---|---|
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| r = 0.053, | r = 0.051, |
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| r = 0.20, | r = 0.07, |
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| r = 0.39, | r = 0.06, |
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| r = 0.11, |
| r = 0.06, |
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| r = 0.23, | r = 0.02, |
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| r = 0.02, | r = −0.14, |
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| r = 0.32, | r = 0.35, |
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| r = 0.39, | r = 0.41, |
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| r = 0.53, | r = 0.54, | r = −0.36, |
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| r = 0.34, | r = 0.15, |
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| r = 0.35, | r = 0.10, |
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| r = 0.12, | r = 0.09, |
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| r = 0.26, | r = 0.09, |
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| r = 0.43, | r = 0.05, |
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| r = 0.41, | r = 0.13, |
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| r = 0.53, |
| r = 0.23, |
Statistically significant values are marked in bold.
Figure 4Individual scores for eleven two-month-old, eleven four-month-old and twelve six-month-old males of N. furzeri along with factor 1 and factor 2 yielded by the principal component analysis. These factors generalize mRNA levels of 14 of 16 5-HT related genes in the brain. Factor 1 loads the genes those expression decreased in old males, such as Tph1a, Tph2, Slc6a4b, Htr1aa, Htr3a, Htr3b, Htr4 and Htr6. Factor 2 loads Mao gene that expression increased in old males. The coordinates of the two axes represent the factor scores of individual animals. Ten of 12 scores corresponding to 6six-month-old males are located in the left half of the graphic. Nine of 11 scores corresponding to two-month-old males are located in the lower half of the graphic.
Correlation between behavioral traits in the novel tank diving test and mRNA levels of 5-HT-related genes in the brain of two-, four- and six-month-old males of N. furzeri.
| Genes | Travelled Distance | Immobility Time | Explored Part of the Tank | Distance from the Bottom | Time in the Lower Third | Time in the Upper Third |
|---|---|---|---|---|---|---|
|
| −0.11 (0.99) | 0.04 (0.99) | −0.13 (0.99) | −0.18 (0.99) | 0.22 (0.99) | −0.13 (0.99) |
|
| −0.27 (0.99) | 0.26 (0.99) | −0.17 (0.99) | 0.11 (0.99) | −0.13 (0.99) | 0.11 (0.99) |
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| −0.30 (0.99) | 0.28 (0.99) | −0.24 (0.99) | 0.08 (0.99) | −0.13 (0.99) | 0.09 (0.99) |
|
| −0.03 (0.99) | −0.05 (0.99) | −0.01 (0.99) | −0.04 (0.99) | 0.02 (0.99) | −0.02 (0.99) |
|
| −0.29 (0.99) | 0.27 (0.99) | −0.18 (0.99) | 0.08 (0.99) | −0.10 (0.99) | 0.09 (0.99) |
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| −0.44 (0.75) | 0.43 (0.78) | −0.19 (0.99) | 0.28 (0.99) | −0.29 (0.99) | 0.25 (0.99) |
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| −0.26 (0.99) | 0.25 (0.99) | −0.32 (0.99) | −0.16 (0.99) | 0.13 (0.99) | −0.19 (0.99) |
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| −0.23 (0.99) | 0.20 (0.99) | −0.09 (0.99) | 0.02 (0.99) | −0.02 (0.99) | 0.03 (0.99) |
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| −0.40 (0.93) | 0.38 (0.96) | −0.16 (0.99) | 0.30 (0.99) | −0.33 (0.99) | 0.23 (0.99) |
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| −0.30 (0.99) | 0.29 (0.99) | −0.29 (0.99) | 0.01 (0.99) | −0.03 (0.99) | 0.04 (0.99) |
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| −0.24 (0.99) | 0.21 (0.99) | −0.15 (0.99) | 0.07 (0.99) | −0.10 (0.99) | 0.07 (0.99) |
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| −0.40 (0.93) | 0.38 (0.96) | −0.30 (0.99) | 0.11 (0.99) | −0.14 (0.99) | 0.08 (0.99) |
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| −0.26 (0.99) | 0.22 (0.99) | −0.02 (0.99) | 0.31 (0.99) | −0.30 (0.99) | 0.33 (0.99) |
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| −0.36 (0.98) | 0.34 (0.99) | −0.14 (0.99) | 0.19 (0.99) | −0.21 (0.99) | 0.24 (0.99) |
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| −0.26 (0.99) | 0.23 (0.99) | −0.14 (0.99) | 0.11 (0.99) | −0.13 (0.99) | 0.10 (0.99) |
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| −0.23 (0.99) | 0.18 (0.99) | −0.20 (0.99) | 0.03 (0.99) | −0.05 (0.99) | 0.06 (0.99) |
p-values (false discovery rate controlled by Bonferroni) are shown in brackets.
Location of 5-HT related genes in the genome of N. furzeri.
| Location (Ensemble) | Mammalian Homologue | |
|---|---|---|
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| sgr13: 18,976,907–18,981,171 | TPH1 |
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| sgr07: 45,615,830–45,638,187 | TPH1 |
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| sgr13: 36,218,596–36,239,915 | TPH2 |
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| sgr14: 7,478,504–7,513,691 | MAOA, MAOB |
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| sgr18: 22,023,293–22,030,954 | 5-HT transporter |
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| sgr18: 29,466,111–29,467,391 | 5-HT1A |
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| sgr04: 71,348,837–71,349,973 | 5-HT1B |
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| sgr14: 3,149,799–3,151,013 | 5-HT1F |
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| sgr14: 12,123,202–12,202,559 | 5-HT2A |
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| sgr04: 14,685,800–14,729,671 | 5-HT2C |
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| sgr11: 48,000,514–48,007,311 | 5-HT3A |
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| sgr11: 48,010,172–48,020,735 | 5-HT3B |
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| sgr01: 53,960,781–54,173,488 | 5-HT4 |
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| sgr08: 18,341,119–18,361,475 | 5-HT5B |
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| sgr15: 33,021,207–33,028,620 | 5-HT6 |
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| sgr18: 7,942,262–7,973,622 | 5-HT7 |
Age-related alterations in tryptophan hydroxylases (TPH), monoamine oxidize (MAO), 5-HT transporter (SERT) and 5-HT receptors in the brains of N. furzeri and mammals.
| Molecule | Mammals (Protein, mRNA) | |
|---|---|---|
| TPH | Tph2 mRNA: | |
| MAO | MAOA activity: ↑ rat [ | |
| SERT | SETR protein: ↓ mouse [ | |
| 5-HT1A | 5-HT1A protein: ↓ rat [ | |
| 5-HT1B | 5-HT1B protein: ↓ rat [ | |
| 5-HT1F | No data | |
| 5-HT2A | 5-HT2A protein: ↓ rats [ | |
| 5-HT2C | ||
| 5-HT3 | No data | |
| 5-HT4 | 5-HT4 protein: ↓ human [ | |
| 5-HT5 | No data | |
| 5-HT6 | 5-HT6 protein: ↓ human [ | |
| 5-HT7 |
0 no alteration, ↑ increase, ↓ decrease in old individuals. M—males, f—females.