Literature DB >> 34675420

Bright and stable luminescent probes for target engagement profiling in live cells.

N Connor Payne1,2, Alena S Kalyakina1,3, Kritika Singh1,4, Mark A Tye1,5, Ralph Mazitschek6,7,8.   

Abstract

The pace of progress in biomedical research directly depends on techniques that enable the quantitative interrogation of interactions between proteins and other biopolymers, or with their small-molecule ligands. Time-resolved Förster resonance energy transfer (TR-FRET) assay platforms offer high sensitivity and specificity. However, the paucity of accessible and biocompatible luminescent lanthanide complexes, which are essential reagents for TR-FRET-based approaches, and their poor cellular permeability have limited broader adaptation of TR-FRET beyond homogeneous and extracellular assay applications. Here, we report the development of CoraFluors, a new class of macrotricyclic terbium complexes, which are synthetically readily accessible, stable in biological media and exhibit photophysical and physicochemical properties that are desirable for biological studies. We validate the performance of CoraFluors in cell-free systems, identify cell-permeable analogs and demonstrate their utility in the quantitative domain-selective characterization of Keap1 ligands, as well as in isoform-selective target engagement profiling of HDAC1 inhibitors in live cells.
© 2021. The Author(s), under exclusive licence to Springer Nature America, Inc.

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Year:  2021        PMID: 34675420      PMCID: PMC8555866          DOI: 10.1038/s41589-021-00877-5

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  55 in total

1.  Directed evolution of O6-alkylguanine-DNA alkyltransferase for efficient labeling of fusion proteins with small molecules in vivo.

Authors:  Alexandre Juillerat; Thomas Gronemeyer; Antje Keppler; Susanne Gendreizig; Horst Pick; Horst Vogel; Kai Johnsson
Journal:  Chem Biol       Date:  2003-04

Review 2.  Horizontal Cell Biology: Monitoring Global Changes of Protein Interaction States with the Proteome-Wide Cellular Thermal Shift Assay (CETSA).

Authors:  Lingyun Dai; Nayana Prabhu; Liang Ying Yu; Smaranda Bacanu; Anderson Daniel Ramos; Pär Nordlund
Journal:  Annu Rev Biochem       Date:  2019-04-02       Impact factor: 23.643

3.  In vivo imaging of specific drug-target binding at subcellular resolution.

Authors:  J M Dubach; C Vinegoni; R Mazitschek; P Fumene Feruglio; L A Cameron; R Weissleder
Journal:  Nat Commun       Date:  2014-05-28       Impact factor: 14.919

Review 4.  FRET as a biomolecular research tool - understanding its potential while avoiding pitfalls.

Authors:  W Russ Algar; Niko Hildebrandt; Steven S Vogel; Igor L Medintz
Journal:  Nat Methods       Date:  2019-08-30       Impact factor: 28.547

Review 5.  Fluorescence microscopy.

Authors:  Michael J Sanderson; Ian Smith; Ian Parker; Martin D Bootman
Journal:  Cold Spring Harb Protoc       Date:  2014-10-01

Review 6.  Therapeutic targeting of the NRF2 and KEAP1 partnership in chronic diseases.

Authors:  Antonio Cuadrado; Ana I Rojo; Geoffrey Wells; John D Hayes; Sharon P Cousin; William L Rumsey; Otis C Attucks; Stephen Franklin; Anna-Liisa Levonen; Thomas W Kensler; Albena T Dinkova-Kostova
Journal:  Nat Rev Drug Discov       Date:  2019-04       Impact factor: 84.694

Review 7.  NanoLuc: A Small Luciferase Is Brightening Up the Field of Bioluminescence.

Authors:  Christopher G England; Emily B Ehlerding; Weibo Cai
Journal:  Bioconjug Chem       Date:  2016-04-19       Impact factor: 4.774

8.  A Comparative Study of Target Engagement Assays for HDAC1 Inhibitor Profiling.

Authors:  Rosita R Asawa; Alexey Zakharov; Taylor Niehoff; Ata Chitsaz; Ajit Jadhav; Mark J Henderson; Anton Simeonov; Natalia J Martinez
Journal:  SLAS Discov       Date:  2019-10-29       Impact factor: 3.341

9.  Development of a Homogeneous Time-Resolved Fluorescence Resonance Energy Transfer (TR-FRET) Assay for the Inhibition of Keap1-Nrf2 Protein-Protein Interaction.

Authors:  Sumi Lee; Dhulfiqar Ali Abed; Lesa J Beamer; Longqin Hu
Journal:  SLAS Discov       Date:  2020-06-22       Impact factor: 3.341

10.  Bardoxolone conjugation enables targeted protein degradation of BRD4.

Authors:  Bingqi Tong; Mai Luo; Yi Xie; Jessica N Spradlin; John A Tallarico; Jeffrey M McKenna; Markus Schirle; Thomas J Maimone; Daniel K Nomura
Journal:  Sci Rep       Date:  2020-09-23       Impact factor: 4.379

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  3 in total

1.  A direct high-throughput protein quantification strategy facilitates discovery and characterization of a celastrol-derived BRD4 degrader.

Authors:  N Connor Payne; Semer Maksoud; Bakhos A Tannous; Ralph Mazitschek
Journal:  Cell Chem Biol       Date:  2022-05-31       Impact factor: 9.039

Review 2.  Luminescent Lifetime Regulation of Lanthanide-Doped Nanoparticles for Biosensing.

Authors:  Mingkai Wang; Chuanyu Hu; Qianqian Su
Journal:  Biosensors (Basel)       Date:  2022-02-19

3.  Elucidating the path to Plasmodium prolyl-tRNA synthetase inhibitors that overcome halofuginone resistance.

Authors:  N Connor Payne; Catrine Johansson; Mark A Tye; Kritika Singh; Sofia A Santos; Lọla Fagbami; Akansha Pant; Kayla Sylvester; Madeline R Luth; Sofia Marques; Malcolm Whitman; Maria M Mota; Elizabeth A Winzeler; Amanda K Lukens; Emily R Derbyshire; Udo Oppermann; Dyann F Wirth; Ralph Mazitschek
Journal:  Nat Commun       Date:  2022-08-25       Impact factor: 17.694

  3 in total

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