Literature DB >> 34674167

Agrobacterium-Mediated Seedling Transformation to Measure Circadian Rhythms in Arabidopsis.

Michael K Y Ting1,2,3, Reimo Zoschke2, Michael J Haydon4.   

Abstract

Circadian clocks are endogenous timing mechanisms that allow an organism to adapt cellular processes in anticipation of predictable changes in the environment. Luciferase reporters are well utilized as an effective, nondestructive method to measure circadian rhythms of promoter activity in Arabidopsis. Obtaining stable transgenic reporter lines can be laborious. Here, we report a protocol for Agrobacterium-mediated seedling transformation tailored for plant circadian studies. We show that period estimates generated from wild-type and clock-mutant seedlings transformed with circadian luciferase reporters are similar to rhythms obtained from equivalent stable transgenic seedlings. These experiments demonstrate the versatility and robustness of the protocol for testing new constructs or quickly assessing circadian effects in any genotype of interest.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Agrobacterium transformation; Arabidopsis; Circadian clock; Luciferase

Mesh:

Substances:

Year:  2022        PMID: 34674167     DOI: 10.1007/978-1-0716-1912-4_5

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  17 in total

1.  Orchestrated transcription of key pathways in Arabidopsis by the circadian clock.

Authors:  S L Harmer; J B Hogenesch; M Straume; H S Chang; B Han; T Zhu; X Wang; J A Kreps; S A Kay
Journal:  Science       Date:  2000-12-15       Impact factor: 47.728

2.  Tissue-specific clocks in Arabidopsis show asymmetric coupling.

Authors:  Motomu Endo; Hanako Shimizu; Maria A Nohales; Takashi Araki; Steve A Kay
Journal:  Nature       Date:  2014-10-29       Impact factor: 49.962

3.  Spontaneous spatiotemporal waves of gene expression from biological clocks in the leaf.

Authors:  Bénédicte Wenden; David L K Toner; Sarah K Hodge; Ramon Grima; Andrew J Millar
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-10       Impact factor: 11.205

4.  A hierarchical multi-oscillator network orchestrates the Arabidopsis circadian system.

Authors:  Nozomu Takahashi; Yoshito Hirata; Kazuyuki Aihara; Paloma Mas
Journal:  Cell       Date:  2015-09-24       Impact factor: 41.582

5.  Thermal imaging as a noninvasive technique for analyzing circadian rhythms in plants.

Authors:  Yuri Dakhiya; Rachel M Green
Journal:  New Phytol       Date:  2019-09-25       Impact factor: 10.151

6.  Rapid assessment of gene function in the circadian clock using artificial microRNA in Arabidopsis mesophyll protoplasts.

Authors:  Jeongsik Kim; David E Somers
Journal:  Plant Physiol       Date:  2010-08-13       Impact factor: 8.340

7.  Delayed fluorescence as a universal tool for the measurement of circadian rhythms in higher plants.

Authors:  Peter D Gould; Patrick Diaz; Claire Hogben; Jelena Kusakina; Radia Salem; James Hartwell; Anthony Hall
Journal:  Plant J       Date:  2009-06       Impact factor: 6.417

Review 8.  Wheels within wheels: the plant circadian system.

Authors:  Polly Yingshan Hsu; Stacey L Harmer
Journal:  Trends Plant Sci       Date:  2013-12-24       Impact factor: 18.313

9.  Combining GAL4 GFP enhancer trap with split luciferase to measure spatiotemporal promoter activity in Arabidopsis.

Authors:  Ángela Román; John F Golz; Alex A R Webb; Ian A Graham; Michael J Haydon
Journal:  Plant J       Date:  2019-12-03       Impact factor: 6.417

10.  Coordination of robust single cell rhythms in the Arabidopsis circadian clock via spatial waves of gene expression.

Authors:  Peter D Gould; Mirela Domijan; Mark Greenwood; Isao T Tokuda; Hannah Rees; Laszlo Kozma-Bognar; Anthony Jw Hall; James Cw Locke
Journal:  Elife       Date:  2018-04-26       Impact factor: 8.140

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