Literature DB >> 34671736

Identification of a Zika NS2B epitope as a biomarker for severe clinical phenotypes.

Felix F Loeffler1, Isabelle F T Viana2, Nico Fischer3, Danilo F Coêlho2,4, Carolina S Silva5, Antônio F Purificação2, Catarina M C S Araújo2, Bruno H S Leite2, Ricardo Durães-Carvalho6, Tereza Magalhães2, Clarice N L Morais2, Marli T Cordeiro2, Roberto D Lins2, Ernesto T A Marques2,7, Thomas Jaenisch3,8.   

Abstract

The identification of specific biomarkers for Zika infection and its clinical complications is fundamental to mitigate the infection spread, which has been associated with a broad range of neurological sequelae. We present the characterization of antibody responses in serum samples from individuals infected with Zika, presenting non-severe (classical) and severe (neurological disease) phenotypes, with high-density peptide arrays comprising the Zika NS1 and NS2B proteins. The data pinpoints one strongly IgG-targeted NS2B epitope in non-severe infections, which is absent in Zika patients, where infection progressed to the severe phenotype. This differential IgG profile between the studied groups was confirmed by multivariate data analysis. Molecular dynamics simulations and circular dichroism have shown that the peptide in solution presents itself in a sub-optimal conformation for antibody recognition, which led us to computationally engineer an artificial protein able to stabilize the NS2B epitope structure. The engineered protein was used to interrogate paired samples from mothers and their babies presenting Zika-associated microcephaly and confirmed the absence of NS2B IgG response in those samples. These findings suggest that the assessment of antibody responses to the herein identified NS2B epitope is a strong candidate biomarker for the diagnosis and prognosis of Zika-associated neurological disease. This journal is © The Royal Society of Chemistry.

Entities:  

Year:  2021        PMID: 34671736      PMCID: PMC8459328          DOI: 10.1039/d1md00124h

Source DB:  PubMed          Journal:  RSC Med Chem        ISSN: 2632-8682


  62 in total

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Authors:  Ganggang Wang; Rong Guo; Mark Bartlam; Haitao Yang; Hong Xue; Yiwei Liu; Li Huang; Zihe Rao
Journal:  Protein Sci       Date:  2003-12       Impact factor: 6.725

2.  GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation.

Authors:  Berk Hess; Carsten Kutzner; David van der Spoel; Erik Lindahl
Journal:  J Chem Theory Comput       Date:  2008-03       Impact factor: 6.006

3.  Sequence statistics reliably predict stabilizing mutations in a protein domain.

Authors:  B Steipe; B Schiller; A Plückthun; S Steinbacher
Journal:  J Mol Biol       Date:  1994-07-15       Impact factor: 5.469

4.  Single amino acid fingerprinting of the human antibody repertoire with high density peptide arrays.

Authors:  Laura K Weber; Andrea Palermo; Jonas Kügler; Olivier Armant; Awale Isse; Simone Rentschler; Thomas Jaenisch; Jürgen Hubbuch; Stefan Dübel; Alexander Nesterov-Mueller; Frank Breitling; Felix F Loeffler
Journal:  J Immunol Methods       Date:  2017-02-03       Impact factor: 2.303

5.  Crystal structure of unlinked NS2B-NS3 protease from Zika virus.

Authors:  Zhenzhen Zhang; Yan Li; Ying Ru Loh; Wint Wint Phoo; Alvin W Hung; CongBao Kang; Dahai Luo
Journal:  Science       Date:  2016-12-08       Impact factor: 47.728

6.  Seroprevalence and risk factors for dengue infection in socio-economically distinct areas of Recife, Brazil.

Authors:  Cynthia Braga; Carlos Feitosa Luna; Celina Mariaturchi Martelli; Wayner Vieira de Souza; Marli Tenório Cordeiro; Neal Alexander; Maria de Fátima Pessoa Militão de Albuquerque; José Constantino Silveira Júnior; Ernesto T Marques
Journal:  Acta Trop       Date:  2009-11-06       Impact factor: 3.112

7.  Association between microcephaly, Zika virus infection, and other risk factors in Brazil: final report of a case-control study.

Authors:  Thalia Velho Barreto de Araújo; Ricardo Arraes de Alencar Ximenes; Demócrito de Barros Miranda-Filho; Wayner Vieira Souza; Ulisses Ramos Montarroyos; Ana Paula Lopes de Melo; Sandra Valongueiro; Maria de Fátima Pessoa Militão de Albuquerque; Cynthia Braga; Sinval Pinto Brandão Filho; Marli Tenório Cordeiro; Enrique Vazquez; Danielle di Cavalcanti Souza Cruz; Claudio Maierovitch Pessanha Henriques; Luciana Caroline Albuquerque Bezerra; Priscila Mayrelle da Silva Castanha; Rafael Dhalia; Ernesto Torres Azevedo Marques-Júnior; Celina Maria Turchi Martelli; Laura Cunha Rodrigues
Journal:  Lancet Infect Dis       Date:  2017-12-11       Impact factor: 25.071

8.  Chikungunya virus in US travelers returning from India, 2006.

Authors:  Robert S Lanciotti; Olga L Kosoy; Janeen J Laven; Amanda J Panella; Jason O Velez; Amy J Lambert; Grant L Campbell
Journal:  Emerg Infect Dis       Date:  2007-05       Impact factor: 6.883

9.  Zika virus displacement by a chikungunya outbreak in Recife, Brazil.

Authors:  Tereza Magalhaes; Cynthia Braga; Marli T Cordeiro; Andre L S Oliveira; Priscila M S Castanha; Ana Paula R Maciel; Nathalia M L Amancio; Pollyanne N Gouveia; Valter J Peixoto-da-Silva; Thaciana F L Peixoto; Helena Britto; Priscilla V Lima; Andreza R S Lima; Kerstin D Rosenberger; Thomas Jaenisch; Ernesto T A Marques
Journal:  PLoS Negl Trop Dis       Date:  2017-11-06

10.  BeStSel: a web server for accurate protein secondary structure prediction and fold recognition from the circular dichroism spectra.

Authors:  András Micsonai; Frank Wien; Éva Bulyáki; Judit Kun; Éva Moussong; Young-Ho Lee; Yuji Goto; Matthieu Réfrégiers; József Kardos
Journal:  Nucleic Acids Res       Date:  2018-07-02       Impact factor: 16.971

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  1 in total

1.  LAMP-1 Chimeric to HIV-1 p55Gag in the Immunization of Neonate Mice Induces an Early Germinal Center Formation and AID Expression.

Authors:  Franciane Mouradian Emidio Teixeira; Luana de Mendonça Oliveira; Anna Julia Pietrobon; Érika Machado de Salles; Maria Regina D'Império Lima; Isabelle Freire Tabosa Viana; Roberto Dias Lins; Paula Ordonhez Rigato; Ernesto Torres de Azevedo Marques; Alberto José da Silva Duarte; Maria Notomi Sato
Journal:  Vaccines (Basel)       Date:  2022-08-03
  1 in total

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