Literature DB >> 34654953

The pediatric urobiome in genitourinary conditions: a narrative review.

Elisabeth Cole1, Nader Shaikh1, Catherine S Forster2.   

Abstract

The microbial ecosystem within the bladder that can be measured within the urine, or urobiome, is an emerging field of study with little published data regarding children. However, investigations into urobiome research have the potential to significantly impact the understanding of the pathophysiology of genitourinary conditions, as well as potentially identify novel therapeutics. Therefore, both researchers and clinicians should be aware of pediatric urobiome research. The purpose of this review is to highlight the literature around urobiome research in urinary tract infections, nephrolithiasis, and neurogenic bladder; comment on pediatric-specific considerations when reading and interpreting the urobiome literature; and to identify new potential areas of research.
© 2021. The Author(s), under exclusive licence to International Pediatric Nephrology Association.

Entities:  

Keywords:  Kidney stones; Neurogenic bladder; Urinary tract infections; Urobiome

Mesh：

Year:  2021        PMID： 34654953     DOI： 10.1007/s00467-021-05274-7

Source DB:  PubMed          Journal:  Pediatr Nephrol        ISSN： 0931-041X            Impact factor:   3.651


  45 in total

1.  Evidence of uncultivated bacteria in the adult female bladder.

Authors:  Alan J Wolfe; Evelyn Toh; Noriko Shibata; Ruichen Rong; Kimberly Kenton; MaryPat Fitzgerald; Elizabeth R Mueller; Paul Schreckenberger; Qunfeng Dong; David E Nelson; Linda Brubaker
Journal:  J Clin Microbiol       Date:  2012-01-25       Impact factor: 5.948

2.  Urine is not sterile: use of enhanced urine culture techniques to detect resident bacterial flora in the adult female bladder.

Authors:  Evann E Hilt; Kathleen McKinley; Meghan M Pearce; Amy B Rosenfeld; Michael J Zilliox; Elizabeth R Mueller; Linda Brubaker; Xiaowu Gai; Alan J Wolfe; Paul C Schreckenberger
Journal:  J Clin Microbiol       Date:  2013-12-26       Impact factor: 5.948

3.  A Prospective Study of the Urinary and Gastrointestinal Microbiome in Prepubertal Males.

Authors:  Borna Kassiri; Eva Shrestha; Matthew Kasprenski; Corina Antonescu; Liliana D Florea; Karen S Sfanos; Ming-Hsien Wang
Journal:  Urology       Date:  2019-06-10       Impact factor: 2.649

4.  Description of the voided urinary microbiota in asymptomatic prepubertal children - A pilot study.

Authors:  Lea Fredsgaard; Kristina Thorsteinsson; Caspar Bundgaard-Nielsen; Nadia Ammitzbøll; Peter Leutscher; Qing Chai; Ann-Maria Jensen; Suzette Sørensen; Lia M Pedersen; Søren Hagstrøm; Louise T S Arenholt
Journal:  J Pediatr Urol       Date:  2021-03-27       Impact factor: 1.830

5.  Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns.

Authors:  Maria G Dominguez-Bello; Elizabeth K Costello; Monica Contreras; Magda Magris; Glida Hidalgo; Noah Fierer; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-21       Impact factor: 11.205

6.  The Clinical Urine Culture: Enhanced Techniques Improve Detection of Clinically Relevant Microorganisms.

Authors:  Travis K Price; Tanaka Dune; Evann E Hilt; Krystal J Thomas-White; Stephanie Kliethermes; Cynthia Brincat; Linda Brubaker; Alan J Wolfe; Elizabeth R Mueller; Paul C Schreckenberger
Journal:  J Clin Microbiol       Date:  2016-03-09       Impact factor: 5.948

7.  Assessment of the Urinary Microbiome in Children Younger Than 48 Months.

Authors:  Lauren Kinneman; Wei Zhu; Wendy S W Wong; Nicole Clemency; Marina Provenzano; Thierry Vilboux; Keary Jane't; Patricia Seo-Mayer; Rebecca Levorson; Maybelle Kou; David Ascher; John E Niederhuber; Suchitra K Hourigan
Journal:  Pediatr Infect Dis J       Date:  2020-07       Impact factor: 2.129

8.  Optimized Illumina PCR-free library preparation for bacterial whole genome sequencing and analysis of factors influencing de novo assembly.

Authors:  Christopher Huptas; Siegfried Scherer; Mareike Wenning
Journal:  BMC Res Notes       Date:  2016-05-12

9.  Primer and platform effects on 16S rRNA tag sequencing.

Authors:  Julien Tremblay; Kanwar Singh; Alison Fern; Edward S Kirton; Shaomei He; Tanja Woyke; Janey Lee; Feng Chen; Jeffery L Dangl; Susannah G Tringe
Journal:  Front Microbiol       Date:  2015-08-04       Impact factor: 5.640

10.  Benchmarking urine storage and collection conditions for evaluating the female urinary microbiome.

Authors:  Carrie E Jung; Jessica Chopyk; Ji Hyun Shin; Emily S Lukacz; Linda Brubaker; Leila K Schwanemann; Rob Knight; Alan J Wolfe; David T Pride
Journal:  Sci Rep       Date:  2019-09-16       Impact factor: 4.379
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  2 in total

1.  Gardnerella Exposures Alter Bladder Gene Expression and Augment Uropathogenic Escherichia coli Urinary Tract Infection in Mice.

Authors:  Nicole M Gilbert; Valerie P O'Brien; Chevaughn Waller; Ekatherina Batourina; Cathy Lee Mendelsohn; Amanda L Lewis
Journal:  Front Cell Infect Microbiol       Date:  2022-06-16       Impact factor: 6.073

Review 2.  Emerging Role of Microbiome in the Prevention of Urinary Tract Infections in Children.

Authors:  Anna Kawalec; Danuta Zwolińska
Journal:  Int J Mol Sci       Date:  2022-01-14       Impact factor: 5.923
  2 in total

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