Literature DB >> 26962083

The Clinical Urine Culture: Enhanced Techniques Improve Detection of Clinically Relevant Microorganisms.

Travis K Price1, Tanaka Dune2, Evann E Hilt1, Krystal J Thomas-White1, Stephanie Kliethermes3, Cynthia Brincat4, Linda Brubaker4, Alan J Wolfe1, Elizabeth R Mueller5, Paul C Schreckenberger6.   

Abstract

Enhanced quantitative urine culture (EQUC) detects live microorganisms in the vast majority of urine specimens reported as "no growth" by the standard urine culture protocol. Here, we evaluated an expanded set of EQUC conditions (expanded-spectrum EQUC) to identify an optimal version that provides a more complete description of uropathogens in women experiencing urinary tract infection (UTI)-like symptoms. One hundred fifty adult urogynecology patient-participants were characterized using a self-completed validated UTI symptom assessment (UTISA) questionnaire and asked "Do you feel you have a UTI?" Women responding negatively were recruited into the no-UTI cohort, while women responding affirmatively were recruited into the UTI cohort; the latter cohort was reassessed with the UTISA questionnaire 3 to 7 days later. Baseline catheterized urine samples were plated using both standard urine culture and expanded-spectrum EQUC protocols: standard urine culture inoculated at 1 μl onto 2 agars incubated aerobically; expanded-spectrum EQUC inoculated at three different volumes of urine onto 7 combinations of agars and environments. Compared to expanded-spectrum EQUC, standard urine culture missed 67% of uropathogens overall and 50% in participants with severe urinary symptoms. Thirty-six percent of participants with missed uropathogens reported no symptom resolution after treatment by standard urine culture results. Optimal detection of uropathogens could be achieved using the following: 100 μl of urine plated onto blood (blood agar plate [BAP]), colistin-nalidixic acid (CNA), and MacConkey agars in 5% CO2 for 48 h. This streamlined EQUC protocol achieved 84% uropathogen detection relative to 33% detection by standard urine culture. The streamlined EQUC protocol improves detection of uropathogens that are likely relevant for symptomatic women, giving clinicians the opportunity to receive additional information not currently reported using standard urine culture techniques.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 26962083      PMCID: PMC4844725          DOI: 10.1128/JCM.00044-16

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  15 in total

1.  Asymptomatic infections of the urinary tract.

Authors:  E H KASS
Journal:  Trans Assoc Am Physicians       Date:  1956

2.  Evidence of uncultivated bacteria in the adult female bladder.

Authors:  Alan J Wolfe; Evelyn Toh; Noriko Shibata; Ruichen Rong; Kimberly Kenton; MaryPat Fitzgerald; Elizabeth R Mueller; Paul Schreckenberger; Qunfeng Dong; David E Nelson; Linda Brubaker
Journal:  J Clin Microbiol       Date:  2012-01-25       Impact factor: 5.948

3.  Urine is not sterile: use of enhanced urine culture techniques to detect resident bacterial flora in the adult female bladder.

Authors:  Evann E Hilt; Kathleen McKinley; Meghan M Pearce; Amy B Rosenfeld; Michael J Zilliox; Elizabeth R Mueller; Linda Brubaker; Xiaowu Gai; Alan J Wolfe; Paul C Schreckenberger
Journal:  J Clin Microbiol       Date:  2013-12-26       Impact factor: 5.948

4.  Validation of a patient-administered questionnaire to measure the severity and bothersomeness of lower urinary tract symptoms in uncomplicated urinary tract infection (UTI): the UTI Symptom Assessment questionnaire.

Authors:  Darren Clayson; Diane Wild; Helen Doll; Karen Keating; Kathleen Gondek
Journal:  BJU Int       Date:  2005-08       Impact factor: 5.588

5.  Diagnosis of bacteriuria in men: specimen collection and culture interpretation.

Authors:  B A Lipsky; R C Ireton; S D Fihn; R Hackett; R E Berger
Journal:  J Infect Dis       Date:  1987-05       Impact factor: 5.226

6.  Diagnosis of coliform infection in acutely dysuric women.

Authors:  W E Stamm; G W Counts; K R Running; S Fihn; M Turck; K K Holmes
Journal:  N Engl J Med       Date:  1982-08-19       Impact factor: 91.245

7.  Incontinence medication response relates to the female urinary microbiota.

Authors:  Krystal J Thomas-White; Evann E Hilt; Cynthia Fok; Meghan M Pearce; Elizabeth R Mueller; Stephanie Kliethermes; Kristin Jacobs; Michael J Zilliox; Cynthia Brincat; Travis K Price; Gina Kuffel; Paul Schreckenberger; Xiaowu Gai; Linda Brubaker; Alan J Wolfe
Journal:  Int Urogynecol J       Date:  2015-09-30       Impact factor: 2.894

8.  Voided midstream urine culture and acute cystitis in premenopausal women.

Authors:  Thomas M Hooton; Pacita L Roberts; Marsha E Cox; Ann E Stapleton
Journal:  N Engl J Med       Date:  2013-11-14       Impact factor: 91.245

9.  Spectrum of bacterial colonization associated with urothelial cells from patients with chronic lower urinary tract symptoms.

Authors:  Rajvinder Khasriya; Sanchutha Sathiananthamoorthy; Salim Ismail; Michael Kelsey; Mike Wilson; Jennifer L Rohn; James Malone-Lee
Journal:  J Clin Microbiol       Date:  2013-04-17       Impact factor: 5.948

10.  Integrated next-generation sequencing of 16S rDNA and metaproteomics differentiate the healthy urine microbiome from asymptomatic bacteriuria in neuropathic bladder associated with spinal cord injury.

Authors:  Derrick E Fouts; Rembert Pieper; Sebastian Szpakowski; Hans Pohl; Susan Knoblach; Moo-Jin Suh; Shih-Ting Huang; Inger Ljungberg; Bruce M Sprague; Sarah K Lucas; Manolito Torralba; Karen E Nelson; Suzanne L Groah
Journal:  J Transl Med       Date:  2012-08-28       Impact factor: 5.531

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  111 in total

1.  Urobiome updates: advances in urinary microbiome research.

Authors:  Alan J Wolfe; Linda Brubaker
Journal:  Nat Rev Urol       Date:  2019-02       Impact factor: 14.432

2.  A Cross-sectional Pilot Cohort Study Comparing Standard Urine Collection to the Peezy Midstream Device for Research Studies Involving Women.

Authors:  Elizabeth Southworth; Baylie Hochstedler; Travis K Price; Cara Joyce; Alan J Wolfe; Elizabeth R Mueller
Journal:  Female Pelvic Med Reconstr Surg       Date:  2019 Mar/Apr       Impact factor: 2.091

Review 3.  Utility of DNA Next-Generation Sequencing and Expanded Quantitative Urine Culture in Diagnosis and Management of Chronic or Persistent Lower Urinary Tract Symptoms.

Authors:  Monika Gasiorek; Michael H Hsieh; Catherine S Forster
Journal:  J Clin Microbiol       Date:  2019-12-23       Impact factor: 5.948

4.  Detecting viral genomes in the female urinary microbiome.

Authors:  Andrea Garretto; Krystal Thomas-White; Alan J Wolfe; Catherine Putonti
Journal:  J Gen Virol       Date:  2018-06-11       Impact factor: 3.891

Review 5.  The association between bacteria and urinary stones.

Authors:  Andrew L Schwaderer; Alan J Wolfe
Journal:  Ann Transl Med       Date:  2017-01

Review 6.  Questions and challenges associated with studying the microbiome of the urinary tract.

Authors:  Yige Bao; Kait F Al; Ryan M Chanyi; Samantha Whiteside; Malcom Dewar; Hassan Razvi; Gregor Reid; Jeremy P Burton
Journal:  Ann Transl Med       Date:  2017-01

7.  Biographical Feature: Paul C. Schreckenberger, Ph.D.

Authors:  Karen C Carroll
Journal:  J Clin Microbiol       Date:  2017-06-14       Impact factor: 5.948

8.  Urinary symptoms are associated with certain urinary microbes in urogynecologic surgical patients.

Authors:  Cynthia S Fok; Xiang Gao; Huaiying Lin; Krystal J Thomas-White; Elizabeth R Mueller; Alan J Wolfe; Qunfeng Dong; Linda Brubaker
Journal:  Int Urogynecol J       Date:  2018-08-16       Impact factor: 2.894

9.  Aerococcus urinae Isolated from Women with Lower Urinary Tract Symptoms: In Vitro Aggregation and Genome Analysis.

Authors:  Evann E Hilt; Catherine Putonti; Krystal Thomas-White; Amanda L Lewis; Karen L Visick; Nicole M Gilbert; Alan J Wolfe
Journal:  J Bacteriol       Date:  2020-06-09       Impact factor: 3.490

Review 10.  Diagnosis of Urinary Tract Infection in the Neuropathic Bladder: Changing the Paradigm to Include the Microbiome.

Authors:  Catherine S Forster; Hans Pohl
Journal:  Top Spinal Cord Inj Rehabil       Date:  2019
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