Literature DB >> 34613758

A Novel Multifunctional Arabinofuranosidase/Endoxylanase/β-Xylosidase GH43 Enzyme from Paenibacillus curdlanolyticus B-6 and Its Synergistic Action To Produce Arabinose and Xylose from Cereal Arabinoxylan.

Puangpen Limsakul1, Paripok Phitsuwan1, Rattiya Waeonukul1,2, Patthra Pason1,2, Chakrit Tachaapaikoon1,2, Kanokwan Poomputsa1, Akihiko Kosugi3, Khanok Ratanakhanokchai1,2.   

Abstract

PcAxy43B is a modular protein comprising a catalytic domain of glycoside hydrolase family 43 (GH43), a family 6 carbohydrate-binding module (CBM6), and a family 36 carbohydrate-binding module (CBM36) and found to be a novel multifunctional xylanolytic enzyme from Paenibacillus curdlanolyticus B-6. This enzyme exhibited α-l-arabinofuranosidase, endoxylanase, and β-d-xylosidase activities. The α-l-arabinofuranosidase activity of PcAxy43B revealed a new property of GH43, via the release of both long-chain cereal arabinoxylan and short-chain arabinoxylooligosaccharide (AXOS), as well as release from both the C(O)2 and C(O)3 positions of AXOS, which is different from what has been seen for other arabinofuranosidases. PcAxy43B liberated a series of xylooligosaccharides (XOSs) from birchwood xylan and xylohexaose, indicating that PcAxy43B exhibited endoxylanase activity. PcAxy43B produced xylose from xylobiose and reacted with p-nitrophenyl-β-d-xylopyranoside as a result of β-xylosidase activity. PcAxy43B effectively released arabinose together with XOSs and xylose from the highly arabinosyl-substituted rye arabinoxylan. Moreover, PcAxy43B showed significant synergistic action with the trifunctional endoxylanase/β-xylosidase/α-l-arabinofuranosidase PcAxy43A and the endoxylanase Xyn10C from strain B-6, in which almost all products produced from rye arabinoxylan by these combined enzymes were arabinose and xylose. In addition, the presence of CBM36 was found to be necessary for the endoxylanase property of PcAxy43B. PcAxy43B is capable of hydrolyzing untreated cereal biomass, corn hull, and rice straw into XOSs and xylose. Hence, PcAxy43B, a significant accessory multifunctional xylanolytic enzyme, is a potential candidate for application in the saccharification of cereal biomass. IMPORTANCE Enzymatic saccharification of cereal biomass is a strategy for the production of fermented sugars from low-price raw materials. In the present study, PcAxy43B from P. curdlanolyticus B-6 was found to be a novel multifunctional α-l-arabinofuranosidase/endoxylanase/β-d-xylosidase enzyme of glycoside hydrolase family 43. It is effective in releasing arabinose, xylose, and XOSs from the highly arabinosyl-substituted rye arabinoxylan, which is usually resistant to hydrolysis by xylanolytic enzymes. Moreover, almost all products produced from rye arabinoxylan by the combination of PcAxy43B with the trifunctional xylanolytic enzyme PcAxy43A and the endoxylanase Xyn10C from strain B-6 were arabinose and xylose, which can be used to produce several value-added products. In addition, PcAxy43B is capable of hydrolyzing untreated cereal biomass into XOSs and xylose. Thus, PcAxy43B is an important multifunctional xylanolytic enzyme with high potential in biotechnology.

Entities:  

Keywords:  Paenibacillus curdlanolyticus; carbohydrate-binding module; cereal arabinoxylan; cereal biomass; glycoside hydrolase family 43; multifunctional xylanolytic enzyme; α-l-arabinofuranosidase/endoxylanase/β-xylosidase activities

Mesh:

Substances:

Year:  2021        PMID: 34613758      PMCID: PMC8612256          DOI: 10.1128/AEM.01730-21

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   5.005


  37 in total

1.  Ab initio structure determination and functional characterization of CBM36; a new family of calcium-dependent carbohydrate binding modules.

Authors:  Sheelan Jamal-Talabani; Alisdair B Boraston; Johan P Turkenburg; Nicolas Tarbouriech; Valérie M-A Ducros; Gideon J Davies
Journal:  Structure       Date:  2004-07       Impact factor: 5.006

2.  Paenibacillus curdlanolyticus B-6 xylanase Xyn10C capable of producing a doubly arabinose-substituted xylose, α-L-Araf-(1→2)-[α-L-Araf-(1→3)]-D-Xylp, from rye arabinoxylan.

Authors:  Siriluck Imjongjairak; Pattaporn Jommuengbout; Pirin Karpilanondh; Hirotaka Katsuzaki; Makiko Sakka; Tetsuya Kimura; Patthra Pason; Chakrit Tachaapaikoon; Jariya Romsaiyud; Khanok Ratanakhanokchai; Kazuo Sakka
Journal:  Enzyme Microb Technol       Date:  2015-02-13       Impact factor: 3.493

3.  Substrate specificity of three recombinant α-L-arabinofuranosidases from Bifidobacterium adolescentis and their divergent action on arabinoxylan and arabinoxylan oligosaccharides.

Authors:  Stijn Lagaert; Annick Pollet; Jan A Delcour; Rob Lavigne; Christophe M Courtin; Guido Volckaert
Journal:  Biochem Biophys Res Commun       Date:  2010-10-29       Impact factor: 3.575

4.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

5.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

6.  The lignin present in steam pretreated softwood binds enzymes and limits cellulose accessibility.

Authors:  Linoj Kumar; Valdeir Arantes; Richard Chandra; Jack Saddler
Journal:  Bioresour Technol       Date:  2011-10-08       Impact factor: 9.642

7.  Ruminiclostridium josui Abf62A-Axe6A: A tri-functional xylanolytic enzyme exhibiting α-l-arabinofuranosidase, endoxylanase, and acetylxylan esterase activities.

Authors:  Yayun Wang; Makiko Sakka; Haruka Yagi; Satoshi Kaneko; Hirotaka Katsuzaki; Emi Kunitake; Tetsuya Kimura; Kazuo Sakka
Journal:  Enzyme Microb Technol       Date:  2018-05-30       Impact factor: 3.493

8.  Analysis of the structural and functional diversity of plant cell wall specific family 6 carbohydrate binding modules.

Authors:  D Wade Abbott; Elizabeth Ficko-Blean; Alicia Lammerts van Bueren; Artur Rogowski; Alan Cartmell; Pedro M Coutinho; Bernard Henrissat; Harry J Gilbert; Alisdair B Boraston
Journal:  Biochemistry       Date:  2009-11-03       Impact factor: 3.162

9.  The mechanism by which a distinguishing arabinofuranosidase can cope with internal di-substitutions in arabinoxylans.

Authors:  Camila Ramos Dos Santos; Priscila Oliveira de Giuseppe; Flávio Henrique Moreira de Souza; Letícia Maria Zanphorlin; Mariane Noronha Domingues; Renan Augusto Siqueira Pirolla; Rodrigo Vargas Honorato; Celisa Caldana Costa Tonoli; Mariana Abrahão Bueno de Morais; Vanesa Peixoto de Matos Martins; Lucas Miranda Fonseca; Fernanda Büchli; Paulo Sergio Lopes de Oliveira; Fábio Cesar Gozzo; Mário Tyago Murakami
Journal:  Biotechnol Biofuels       Date:  2018-08-11       Impact factor: 6.040

10.  Microbial xylanases and their industrial application in pulp and paper biobleaching: a review.

Authors:  Abhishek Walia; Shiwani Guleria; Preeti Mehta; Anjali Chauhan; Jyoti Parkash
Journal:  3 Biotech       Date:  2017-04-08       Impact factor: 2.893

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  1 in total

1.  Biochemical and Molecular Dynamics Study of a Novel GH 43 α-l-Arabinofuranosidase/β-Xylosidase From Caldicellulosiruptor saccharolyticus DSM8903.

Authors:  Md Abu Saleh; Shafi Mahmud; Sarah Albogami; Ahmed M El-Shehawi; Gobindo Kumar Paul; Shirmin Islam; Amit Kumar Dutta; Md Salah Uddin; Shahriar Zaman
Journal:  Front Bioeng Biotechnol       Date:  2022-02-11
  1 in total

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