| Literature DB >> 34601599 |
Susanna C Larsson1,2, Siddhartha Kar3, John R B Perry4, Paul Carter5,6, Mathew Vithayathil7, Amy M Mason8,9, Douglas F Easton10,11, Stephen Burgess5,12.
Abstract
CONTEXT: The causal role of endogenous estradiol in cancers other than breast and endometrial cancer remains unclear.Entities:
Keywords: Mendelian randomization; cancer; estradiol; estrogens
Mesh:
Substances:
Year: 2022 PMID: 34601599 PMCID: PMC8764348 DOI: 10.1210/clinem/dgab713
Source DB: PubMed Journal: J Clin Endocrinol Metab ISSN: 0021-972X Impact factor: 6.134
Single-nucleotide polymorphisms used as instrumental variables for serum E2 levels in the primary and secondary genetic instrument
| Association with E2 in men | Association with E2 in premenopausal women | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Instrument | SNP | Chr | Gene | EA | OA | Beta | SE |
| Beta | SE |
|
| Primary | rs727479 | 15 | CYP19A1 | A | C | 1.390 | 0.120 | 8.2 × 10-30 | 0.014 | 0.006 | 0.011 |
| Secondary | rs1260326 | 2 | GCKR | C | T | 0.006 | 0.001 | 9.6 × 10-11 | 0.012 | 0.006 | 0.036 |
| Secondary | rs45446698 | 7 | CYP3A7 | T | G | 0.016 | 0.002 | 7.9 × 10-14 | 0.032 | 0.014 | 0.020 |
| Secondary | rs34019140 | 14 | ADAM6 | G | A | 0.012 | 0.001 | 6.9 × 10-42 | 0.011 | 0.006 | 0.043 |
| Secondary | rs7173595 | 15 | CYP19A1 | T | C | 0.016 | 0.001 | 3.6 × 10-72 | 0.014 | 0.006 | 0.012 |
| Secondary | rs727428 | 17 | SHBG | C | T | 0.006 | 0.001 | 1.8 × 10-11 | 0.025 | 0.005 | <0.001 |
Abbreviations: Chr, chromosome; E2, 17β-estradiol; EA, effect allele (ie, the allele associated with higher serum E2 levels); OA, other allele; SE, standard error; SNP, single-nucleotide polymorphism.
aEffects estimates (beta coefficients and standard errors) represent the change in serum E2 in pg/mL from the genome-wide association study by Eriksson et al (17) (primary instrument) and the change in log-transformed E2 in pmol/L from the genome-wide association study by Ruth et al (18) (secondary instrument) per additional effect allele.
bEffects estimates (beta coefficients and standard errors) represent the change in serum E2 in log-transformed pmol/L per additional effect allele in premenopausal women in UK Biobank.
cIn complete linkage disequilibrium with rs727479 (CYP19A1).
Definitions of site-specific cancer outcomes in the UK Biobank cohort
| Cancer | ICD-9 codes | ICD-10 codes | Self-report (field 20001) | Cancer histology |
|---|---|---|---|---|
| Breast & gynecological cancers | ||||
| Breast cancer | 174, 175, V10.3 | C50, Z85.3 | 1002 | |
| Endometrial/uterine cancer | 179, 182, V10.42, | C54, C55, Z85.42 | 1040 | |
| Cervical cancer | 180, V10.41 | C53, Z85.41 | 1041 | |
| Ovarian cancer | 183.0, 183.2, 183.8, 183.9, V10.43 | C56, C57.0, C57.4, Z85.43 | 1039 | |
| Blood cancers | ||||
| Non-Hodgkin lymphoma | 200, 202.0, 202.1, 202.2, 202.7, V10.71 | C82, C83, C84, C85, C86, C88.0, C88.4, Z85.72 | 1053 | |
| Leukemia | 204, 205, 206, 207, 208, V10.6 | C91, C92, C93, C94.0, C94.2, C94.3, C94.4, C94.8, C95, Z85.6 | 1048, 1055, 1056, 1074 | |
| Multiple myeloma | 203.0, 203.1 | C90.0, C90.1 | 1050 | 9732, 9733 |
| Digestive system cancers | ||||
| Colorectal cancer | 153, 154.0, 154.1, V10.05, V10.06 | C18, C19, C20, Z85.038, Z85.048 | 1020, 1022, 1023 | |
| Pancreatic cancer | 157 | C25, Z85.07 | 1034 | |
| Esophageal cancer | 150, V10.03 | C15, Z85.01 | 1017 | |
| Stomach cancer | 151, V10.04 | C16, Z85.028 | 1018 | |
| Biliary tract cancer | 155.1, 156.0 | C22.1, C23, C24 | 1025 | |
| Liver cancer | 155.0 | C22.0 | 1024 | 8170, 8171, 8172, 8173, 8174, 8175 |
| Urinary tract cancers | ||||
| Bladder cancer | 188, 189.1, 189.2, V10.51, V10.53 | C67, C65, C66, Z85.51, Z85.54, Z85.53 | 1035 | |
| Kidney cancer | 189.0, V10.52 | C64, Z85.528 | 1034 | |
| Other cancers | ||||
| Melanoma | 172, V10.82 | C43, Z85.820 | 1059 | |
| Lung cancer | 162, V10.1 | C33, C34, C39.9, Z85.1 | 1001, 1027, 1028, 1080 | |
| Head and neck cancer | 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 160, 161, V10.01, V10.02, V10.21, V10.22 | C00, C01, C02, C03, C04, C05, C06, C07, C08, C09, C10, C11, C12, C13, C14, C30, C31, C32, Z85.21, Z85.22, Z85.81 | 1006, 1007, 1009, 1004, 1010, 1011, 1012, 1077, 1078, 1079, 1005, 1015, 1016 | |
| Brain cancer | 191, 192.0, 192.1, 192.2, 192.3, V10.85 | C70, C71, C72.0, C72.3, Z85.841 | 1031, 1032, 1033 | |
| Thyroid cancer | 193, V10.87 | C73, Z85.850 | 1065 |
The Self-report and Cancer histology columns provide the internal UK Biobank codes used to define each outcome (available at https://biobank.ctsu.ox.ac.uk/crystal/coding.cgi?id=3 and https://biobank.ctsu.ox.ac.uk/crystal/coding.cgi?id=38).
Abbreviations: ICD, international classification of diseases.
Figure 1.Associations of serum E2 levels instrumented by rs727479 in the CYP19A1 gene region with breast, endometrial, and ovarian cancer and their subtypes based on data from consortia. The odds ratios are scaled per 0.01 unit increase in log-transformed serum E2 levels in pmol/L. The number of controls is 108 979 in the endometrial cancer meta-GWAS, 105 974 in the Breast Cancer Association Consortium, and 40 941 in the Ovarian Cancer Association Consortium. Abbreviations: E2, 17β-estradiol; ER+, estrogen receptor positive; ER-, estrogen receptor negative; OR, odds ratio.
Figure 2.Associations of serum E2 levels instrumented by rs727479 in the CYP19A1 gene region with any and 20 site-specific cancers in the UK Biobank cohort. The odds ratios are scaled per 0.01 unit increase in log-transformed serum E2 levels in pmol/L. Abbreviations: E2, 17β-estradiol; OR, odds ratio.