Literature DB >> 34593939

Spatiotemporal development of coexisting wave domains of Rho activity in the cell cortex.

Siarhei Hladyshau1,2, Mary Kho1, Shuyi Nie1, Denis Tsygankov3.   

Abstract

The Rho family GTPases are molecular switches that regulate cytoskeletal dynamics and cell movement through a complex spatiotemporal organization of their activity. In Patiria miniata (starfish) oocytes under in vitro experimental conditions (with overexpressed Ect2, induced expression of Δ90 cyclin B, and roscovitine treatment), such activity generates multiple co-existing regions of coherent propagation of actin waves. Here we use computational modeling to investigate the development and properties of such wave domains. The model reveals that the formation of wave domains requires a balance between the activation and inhibition in the Rho signaling motif. Intriguingly, the development of the wave domains is preceded by a stage of low-activity quasi-static patterns, which may not be readily observed in experiments. Spatiotemporal patterns of this stage and the different paths of their destabilization define the behavior of the system in the later high-activity (observable) stage. Accounting for a strong intrinsic noise allowed us to achieve good quantitative agreement between simulated dynamics in different parameter regimes of the model and different wave dynamics in Patiria miniata and wild type Xenopus laevis (frog) data. For quantitative comparison of simulated and experimental results, we developed an automated method of wave domain detection, which revealed a sharp reversal in the process of pattern formation in starfish oocytes. Overall, our findings provide an insight into spatiotemporal regulation of complex and diverse but still computationally reproducible cell-level actin dynamics.
© 2021. The Author(s).

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Year:  2021        PMID: 34593939      PMCID: PMC8484676          DOI: 10.1038/s41598-021-99029-x

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  37 in total

Review 1.  Reaction-diffusion model as a framework for understanding biological pattern formation.

Authors:  Shigeru Kondo; Takashi Miura
Journal:  Science       Date:  2010-09-24       Impact factor: 47.728

Review 2.  Rho GTPases and actin dynamics in membrane protrusions and vesicle trafficking.

Authors:  Anne J Ridley
Journal:  Trends Cell Biol       Date:  2006-09-01       Impact factor: 20.808

3.  The chemical basis of morphogenesis. 1953.

Authors:  A M Turing
Journal:  Bull Math Biol       Date:  1990       Impact factor: 1.758

4.  Regimes of wave type patterning driven by refractory actin feedback: transition from static polarization to dynamic wave behaviour.

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8.  Analysis of a minimal Rho-GTPase circuit regulating cell shape.

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9.  Pattern formation of Rho GTPases in single cell wound healing.

Authors:  Cory M Simon; Emily M Vaughan; William M Bement; Leah Edelstein-Keshet
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10.  Optogenetic dissection of Rac1 and Cdc42 gradient shaping.

Authors:  S de Beco; K Vaidžiulytė; J Manzi; F Dalier; F di Federico; G Cornilleau; M Dahan; M Coppey
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