| Literature DB >> 34562159 |
Rezvan Marzabani1, Hassan Rezadoost2, Peyman Choopanian3, Sima Kolahdooz4, Nikoo Mozafari5, Mehdi Mirzaie6, Mehrdad Karimi4, Anni I Nieminen7, Mohieddin Jafari8.
Abstract
INTRODUCTION: Vitiligo pathogenesis is complicated, and several possibilities were suggested. However, it is well-known that the metabolism of pigments plays a significant role in the pathogenicity of the disease.Entities:
Keywords: Amino acids; Liquid chromatography; Metabolomics; Plasma; Vitiligo
Mesh:
Substances:
Year: 2021 PMID: 34562159 PMCID: PMC8464575 DOI: 10.1007/s11306-021-01843-x
Source DB: PubMed Journal: Metabolomics ISSN: 1573-3882 Impact factor: 4.290
Demographics of the study cohort
| Information | HCs* | Vitiligo |
|---|---|---|
| Male | 16 | 17 |
| Female | 18 | 14 |
| Age, years** | 35.8 ± 11.9 | 34.96 ± 11.59 |
| Duration of the disease (year) | – | 10.8 ± 9.5 |
| Illness severity (body surface area involvement %) | – | 32.41 ± 22.18 |
| Active disease (having new lesions during last 6 months) | – | 23 |
| Positive family history | – | 24 |
*HCs Healthy controls, ** = Means ± SD
Fig. 1PCA analysis of data obtained by HPLC-FLD. All 22 amino acid concentrations were used to evaluate the sample homogeneity as a quality assessment of this study
Fig. 2a Volcano plot of amino acid plasma concentration, b Gini error reduction diagram with tree number of 500, and notched box plot for increased c and decreased d amino acids. The red and blue dots indicate amino acid values in healthy individuals (control) and vitiligo patients, respectively. The adjusted p-values are represented in these plots
Fig. 3a ROC curve for Cysteine and Lysine with the highest variations, b ROC curve to show the sensitivity and specificity of the eight top amino acids, i.e. Cys, Lys, Tyr, Orn, Pro, Glu, Leu, and Gly independently with the AUC (Area under curve) values c confusion matrix based on random forest model
Fig. 4Amino acid amount analysis of patients with more and less than 25% of skin involvement area. a Volcano diagram shows the amount fold changes of all amino acids with adjusted p-values. b The notched box plots indicate the amount of glutamic acid in patients compared to healthy individuals
Fig. 5Pathway-associated and disease-associated metabolite analyses. The colored bars are based on P values, and the bar length corresponds to the fold enrichment. The corrected P values are provided