| Literature DB >> 34539640 |
Jianqiao Hong1,2,3, Zihao Qu1,2,3, Xiaoxiao Ji1,2,3, Congsun Li1,2,3, Geng Zhang1,2,3, Ciliang Jin4, Jie Wang1,2,3, Yongxing Zhang1,2,3, Yue Shen1,2,3, Jiahong Meng1,2,3, Chenhe Zhou1,2,3, Chaohua Fang5, Wei Wang1,2,3, Shigui Yan1,2,3.
Abstract
Objectives: To find out the genetic association between IL6 and autoimmune arthritis.Entities:
Keywords: ADAR; IL6; Mendelian randomization; autoimmune arthritis; sIL6R
Mesh:
Substances:
Year: 2021 PMID: 34539640 PMCID: PMC8447937 DOI: 10.3389/fimmu.2021.707617
Source DB: PubMed Journal: Front Immunol ISSN: 1664-3224 Impact factor: 7.561
Figure 1Graphical diagram of the Mendelian randomization analysis between IL6 and risk of autoimmune arthritis. RA, rheumatoid arthritis; AS, ankylosing spondylitis; PsA, psoriatic arthritis.
MR estimates of the causal effect of IL6-signaling and sIL6R level on the risk of autoimmune arthritis.
| Exposure | MR method | Outcome | Association | Heterogeneity | Egger regression | MR PRESSO | |||
|---|---|---|---|---|---|---|---|---|---|
| beta | se | pval | Q | P-value | P-value | P-value | |||
| IL6-signaling | ME | RA | 0.053156 | 0.46213 | 0.914 | 19.34 |
| 0.5733 |
|
| WM | (Euro) | 0.327559 | 0.07645 |
| |||||
| IVW | 0.324962 | 0.12067 |
| ||||||
| ME | RA | -0.00496 | 0.0071 | 0.5234 | 3.54 | 0.6174 | 0.1430 | 0.09 | |
| WM | (UKBB) | 0.005779 | 0.00241 |
| |||||
| IVW | 0.007435 | 0.002 |
| ||||||
| ME | AS | 1.470001 | 1.53846 | 0.3934 | 5.33 | 0.3766 | 0.8838 |
| |
| WM | (Finngen) | 1.434537 | 0.46354 |
| |||||
| IVW | 1.239619 | 0.37985 |
| ||||||
| ME | AS | 0.003159 | 0.00363 | 0.433 | 1.30 | 0.9352 | 0.8485 | 0.237 | |
| WM | (UKBB) | 0.003863 | 0.00122 |
| |||||
| IVW | 0.003868 | 0.00102 |
| ||||||
| ME | PsA | 1.20307 | 2.09803 | 0.5971 | 11.21 |
| 0.7250 | 0.069 | |
| WM | (Finngen) | 0.579845 | 0.43903 | 0.1866 | |||||
| IVW | 0.441713 | 0.52576 | 0.4008 | ||||||
| ME | PsA | 0.002501 | 0.00548 | 0.6717 | 14.02 |
| 0.6613 |
| |
| WM | (UKBB) | 0.000954 | 0.00108 | 0.3762 | |||||
| IVW | 1.77E-05 | 0.00142 | 0.99 | ||||||
| sIL6R | ME | RA | -0.02508 | 0.01238 | 0.0524 | 50.80 |
| 0.6351 |
|
| WM | (Euro)* | -0.02599 | 0.0064 |
| |||||
| IVW | -0.01995 | 0.00615 |
| ||||||
| ME | RA | -0.00021 | 0.00036 | 0.5684 | 48.29 |
| 0.8518 |
| |
| WM | (UKBB) | -0.00034 | 0.00021 | 0.1018 | |||||
| IVW | -0.00026 | 0.00017 | 0.1283 | ||||||
| ME | AS | -0.15921 | 0.05436 |
| 20.85 | 0.9503 | 0.4793 |
| |
| WM | (Finngen) | -0.12799 | 0.0384 |
| |||||
| IVW | -0.12524 | 0.0265 |
| ||||||
| ME | AS | -0.00029 | 0.00016 | 0.0697 | 35.73 | 0.3414 | 0.8073 | 0.085 | |
| WM | (UKBB) | -0.00027 | 0.0001 |
| |||||
| IVW | -0.00033 | 7.6E-05 |
| ||||||
| ME | PsA | -0.07011 | 0.05904 | 0.2437 | 41.86 | 0.1386 | 0.5380 | 0.086 | |
| WM | (Finngen) | -0.04221 | 0.03518 | 0.2302 | |||||
| IVW | -0.03802 | 0.02852 | 0.1825 | ||||||
| ME | PsA | 0.000118 | 0.00017 | 0.4816 | 62.73 |
| 0.1337 |
| |
| WM | (UKBB) | -0.00011 | 8.9E-05 | 0.2077 | |||||
| IVW | -0.0001 | 8.4E-05 | 0.2143 | ||||||
6 IV SNPs were used in IL6-signaling; 34 IV SNPs were used in sIL6R MR analysis. *30 IV SNPs were identified in the Euro RA database. Significant results are in bold. MR, Mendelian randomization; ME, MR-Egger; WM, weighted median; IVW: inverse variance weighted.
Figure 2Forest plot of the causal effects of IL6-signaling and sIL6R on autoimmune arthritis.
Figure 3Forest plot of the causal association between IL6-signaling/sIL6R and autoimmune arthritis by sex.
Gender-stratified MR estimates of the causal effect of IL6-signaling and sIL6R level on the risk of autoimmune arthritis.
| Exposure | MR method | Outcome | Association | Heterogeneity | Egger regression | MR PRESSO | |||
|---|---|---|---|---|---|---|---|---|---|
| beta | se | pval | Q | P-value | P-value | P-value | |||
| IL6 | ME | RA | -0.00517 | 0.010933 | 0.661162 | 3.002 | 0.6996 | 0.206 | 0.124 |
| -signaling | WM | (Female) | 0.008674 | 0.003873 |
| ||||
| IVW | 0.010639 | 0.003077 |
| ||||||
| ME | RA | -0.00465 | 0.008614 | 0.617867 | 2.240 | 0.8150 | 0.371 | 0.669 | |
| WM | (Male) | 0.00236 | 0.002809 | 0.400914 | |||||
| IVW | 0.003676 | 0.002425 | 0.129564 | ||||||
| ME | AS | -0.00083 | 0.004016 | 0.846193 | 1.855 | 0.8689 | 0.682 | 0.854 | |
| WM | (Female) | 0.000379 | 0.001309 | 0.771996 | |||||
| IVW | 0.000869 | 0.00113 | 0.441816 | ||||||
| ME | AS | 0.007835 | 0.006303 | 0.28172 | 0.661 | 0.9850 | 0.942 | 0.105 | |
| WM | (Male) | 0.007138 | 0.002134 |
| |||||
| IVW | 0.007363 | 0.001774 |
| ||||||
| ME | PsA | 0.002284 | 0.005417 | 0.694948 | 9.320 | 0.0970 | 0.360 |
| |
| WM | (Female) | -0.00168 | 0.001378 | 0.222713 | |||||
| IVW | -0.00308 | 0.001534 |
| ||||||
| ME | PsA | 0.002806 | 0.005655 | 0.64576 | 6.215 | 0.2859 | 0.888 |
| |
| WM | (Male) | 0.003881 | 0.001518 |
| |||||
| IVW | 0.003621 | 0.001428 |
| ||||||
| sIL6R | ME | RA | -0.00034 | 0.000501 | 0.505225 | 40.382 | 0.1764 | 0.740 | 0.141 |
| WM | (Female) | -0.00059 | 0.000318 | 0.06377 | |||||
| IVW | -0.00048 | 0.000244 |
| ||||||
| ME | RA | -5E-05 | 0.000352 | 0.887085 | 30.849 | 0.5746 | 0.882 | 0.561 | |
| WM | (Male) | -1E-04 | 0.000245 | 0.684076 | |||||
| IVW | -4.5E-06 | 0.000174 | 0.9794 | ||||||
| ME | AS | -4E-05 | 0.000164 | 0.807609 | 29.348 | 0.6496 | 0.807 | 0.627 | |
| WM | (Female) | -8.9E-06 | 0.00012 | 0.940617 | |||||
| IVW | -7.6E-05 | 8.11E-05 | 0.351547 | ||||||
| ME | AS | -0.00059 | 0.000258 |
| 26.696 | 0.7728 | 0.896 | 0.311 | |
| WM | (Male) | -0.00055 | 0.000186 |
| |||||
| IVW | -0.00062 | 0.000127 |
| ||||||
| ME | PsA | 0.000286 | 0.000175 | 0.111997 | 38.330 | 0.2404 | 0.261 | 0.319 | |
| WM | (Female) | 0.00013 | 0.000112 | 0.247094 | |||||
| IVW | 0.000112 | 8.7E-05 | 0.197332 | ||||||
| ME | PsA | -7.9E-05 | 0.000218 | 0.720009 | 46.942 | 0.0547 | 0.154 |
| |
| WM | (Male) | -0.00032 | 0.000134 |
| |||||
| IVW | -0.00036 | 0.00011 |
| ||||||
Significant results are in bold. MR, Mendelian randomization; ME, MR-Egger; WM, weighted median; IVW, inverse variance weighted
Figure 4Expression of ADAR in RA or PsA from GEO datasets GSE61281 (A) and GSE74143 (B). con, control; psa, psoriatic arthritis; ps, psoriasis; RA, rheumatoid arthritis; F, female; M, male. Data from all bar graphs are presented as mean ± SEM. (*P < 0.05, ****P < 0.0001, n.s, not significant).
Figure 5Regional plot of the genetic variants at 1q21.3 and their association with autoimmune arthritis.