Literature DB >> 34520724

Open-state structure and pore gating mechanism of the cardiac sodium channel.

Daohua Jiang1, Richard Banh2, Tamer M Gamal El-Din3, Lige Tonggu3, Michael J Lenaeus4, Régis Pomès2, Ning Zheng5, William A Catterall6.   

Abstract

The heartbeat is initiated by voltage-gated sodium channel NaV1.5, which opens rapidly and triggers the cardiac action potential; however, the structural basis for pore opening remains unknown. Here, we blocked fast inactivation with a mutation and captured the elusive open-state structure. The fast inactivation gate moves away from its receptor, allowing asymmetric opening of pore-lining S6 segments, which bend and rotate at their intracellular ends to dilate the activation gate to ∼10 Å diameter. Molecular dynamics analyses predict physiological rates of Na+ conductance. The open-state pore blocker propafenone binds in a high-affinity pose, and drug-access pathways are revealed through the open activation gate and fenestrations. Comparison with mutagenesis results provides a structural map of arrhythmia mutations that target the activation and fast inactivation gates. These results give atomic-level insights into molecular events that underlie generation of the action potential, open-state drug block, and fast inactivation of cardiac sodium channels, which initiate the heartbeat.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  antiarrhythmic drug; arrhythmia mutation; cardiac sodium channel; cryo-EM structure; fast inactivation; open state

Mesh:

Substances:

Year:  2021        PMID: 34520724      PMCID: PMC8673466          DOI: 10.1016/j.cell.2021.08.021

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   66.850


  70 in total

1.  A critical role for the S4-S5 intracellular loop in domain IV of the sodium channel alpha-subunit in fast inactivation.

Authors:  J C McPhee; D S Ragsdale; T Scheuer; W A Catterall
Journal:  J Biol Chem       Date:  1998-01-09       Impact factor: 5.157

2.  Fenestrations control resting-state block of a voltage-gated sodium channel.

Authors:  Tamer M Gamal El-Din; Michael J Lenaeus; Ning Zheng; William A Catterall
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-05       Impact factor: 11.205

3.  Block of single cardiac Na+ channels by antiarrhythmic drugs: the effect of amiodarone, propafenone and diprafenone.

Authors:  M Kohlhardt; H Fichtner
Journal:  J Membr Biol       Date:  1988-05       Impact factor: 1.843

4.  Local anesthetics: hydrophilic and hydrophobic pathways for the drug-receptor reaction.

Authors:  B Hille
Journal:  J Gen Physiol       Date:  1977-04       Impact factor: 4.086

5.  A mutation in segment IVS6 disrupts fast inactivation of sodium channels.

Authors:  J C McPhee; D S Ragsdale; T Scheuer; W A Catterall
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-06       Impact factor: 11.205

Review 6.  The surprising heart: a review of recent progress in cardiac electrophysiology.

Authors:  D Noble
Journal:  J Physiol       Date:  1984-08       Impact factor: 5.182

7.  CHARMM-GUI Membrane Builder for Complex Biological Membrane Simulations with Glycolipids and Lipoglycans.

Authors:  Jumin Lee; Dhilon S Patel; Jonas Ståhle; Sang-Jun Park; Nathan R Kern; Seonghoon Kim; Joonseong Lee; Xi Cheng; Miguel A Valvano; Otto Holst; Yuriy A Knirel; Yifei Qi; Sunhwan Jo; Jeffery B Klauda; Göran Widmalm; Wonpil Im
Journal:  J Chem Theory Comput       Date:  2018-12-28       Impact factor: 6.006

8.  Simulations of anionic lipid membranes: development of interaction-specific ion parameters and validation using NMR data.

Authors:  Richard M Venable; Yun Luo; Klaus Gawrisch; Benoît Roux; Richard W Pastor
Journal:  J Phys Chem B       Date:  2013-08-22       Impact factor: 2.991

Review 9.  Hydrophobic gating in ion channels.

Authors:  Prafulla Aryal; Mark S P Sansom; Stephen J Tucker
Journal:  J Mol Biol       Date:  2014-08-12       Impact factor: 6.151

10.  Gctf: Real-time CTF determination and correction.

Authors:  Kai Zhang
Journal:  J Struct Biol       Date:  2015-11-19       Impact factor: 2.867

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  12 in total

Review 1.  Ionic channels in nerve membranes, 50 years on.

Authors:  Bertil Hille
Journal:  Prog Biophys Mol Biol       Date:  2021-11-29       Impact factor: 3.667

2.  Activation and closed-state inactivation mechanisms of the human voltage-gated KV4 channel complexes.

Authors:  Wenlei Ye; Hongtu Zhao; Yaxin Dai; Yingdi Wang; Yu-Hua Lo; Lily Yeh Jan; Chia-Hsueh Lee
Journal:  Mol Cell       Date:  2022-05-20       Impact factor: 19.328

Review 3.  Structural Advances in Voltage-Gated Sodium Channels.

Authors:  Daohua Jiang; Jiangtao Zhang; Zhanyi Xia
Journal:  Front Pharmacol       Date:  2022-06-03       Impact factor: 5.988

4.  Characterizing fenestration size in sodium channel subtypes and their accessibility to inhibitors.

Authors:  Elaine Tao; Ben Corry
Journal:  Biophys J       Date:  2021-12-24       Impact factor: 4.033

Review 5.  Fenestropathy of Voltage-Gated Sodium Channels.

Authors:  Tamer M Gamal El-Din; Michael J Lenaeus
Journal:  Front Pharmacol       Date:  2022-02-11       Impact factor: 5.810

Review 6.  P-Loop Channels: Experimental Structures, and Physics-Based and Neural Networks-Based Models.

Authors:  Denis B Tikhonov; Boris S Zhorov
Journal:  Membranes (Basel)       Date:  2022-02-16

Review 7.  Druggability of Voltage-Gated Sodium Channels-Exploring Old and New Drug Receptor Sites.

Authors:  Goragot Wisedchaisri; Tamer M Gamal El-Din
Journal:  Front Pharmacol       Date:  2022-03-17       Impact factor: 5.810

Review 8.  Sodium Channels and Local Anesthetics-Old Friends With New Perspectives.

Authors:  Jannis Körner; Simone Albani; Vishal Sudha Bhagavath Eswaran; Anna B Roehl; Giulia Rossetti; Angelika Lampert
Journal:  Front Pharmacol       Date:  2022-03-28       Impact factor: 5.810

Review 9.  Bifurcations and Proarrhythmic Behaviors in Cardiac Electrical Excitations.

Authors:  Kunichika Tsumoto; Yasutaka Kurata
Journal:  Biomolecules       Date:  2022-03-16

10.  Structural basis for modulation of human NaV1.3 by clinical drug and selective antagonist.

Authors:  Xiaojing Li; Feng Xu; Hao Xu; Shuli Zhang; Yiwei Gao; Hongwei Zhang; Yanli Dong; Yanchun Zheng; Bei Yang; Jianyuan Sun; Xuejun Cai Zhang; Yan Zhao; Daohua Jiang
Journal:  Nat Commun       Date:  2022-03-11       Impact factor: 14.919

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