Literature DB >> 34520554

Novel anti-repression mechanism of H-NS proteins by a phage protein.

Fredj Ben Bdira1,2, Amanda M Erkelens1,2, Liang Qin1,2, Alexander N Volkov3,4, Andrew M Lippa5, Nicholas Bowring1,2, Aimee L Boyle1, Marcellus Ubbink1, Simon L Dove5, Remus T Dame1,2.   

Abstract

H-NS family proteins, bacterial xenogeneic silencers, play central roles in genome organization and in the regulation of foreign genes. It is thought that gene repression is directly dependent on the DNA binding modes of H-NS family proteins. These proteins form lateral protofilaments along DNA. Under specific environmental conditions they switch to bridging two DNA duplexes. This switching is a direct effect of environmental conditions on electrostatic interactions between the oppositely charged DNA binding and N-terminal domains of H-NS proteins. The Pseudomonas lytic phage LUZ24 encodes the protein gp4, which modulates the DNA binding and function of the H-NS family protein MvaT of Pseudomonas aeruginosa. However, the mechanism by which gp4 affects MvaT activity remains elusive. In this study, we show that gp4 specifically interferes with the formation and stability of the bridged MvaT-DNA complex. Structural investigations suggest that gp4 acts as an 'electrostatic zipper' between the oppositely charged domains of MvaT protomers, and stabilizes a structure resembling their 'half-open' conformation, resulting in relief of gene silencing and adverse effects on P. aeruginosa growth. The ability to control H-NS conformation and thereby its impact on global gene regulation and growth might open new avenues to fight Pseudomonas multidrug resistance.
© The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 34520554      PMCID: PMC8501957          DOI: 10.1093/nar/gkab793

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  69 in total

1.  The Xplor-NIH NMR molecular structure determination package.

Authors:  Charles D Schwieters; John J Kuszewski; Nico Tjandra; G Marius Clore
Journal:  J Magn Reson       Date:  2003-01       Impact factor: 2.229

Review 2.  The role of nucleoid-associated proteins in the organization and compaction of bacterial chromatin.

Authors:  Remus T Dame
Journal:  Mol Microbiol       Date:  2005-05       Impact factor: 3.501

Review 3.  Silencing of xenogeneic DNA by H-NS-facilitation of lateral gene transfer in bacteria by a defense system that recognizes foreign DNA.

Authors:  William Wiley Navarre; Michael McClelland; Stephen J Libby; Ferric C Fang
Journal:  Genes Dev       Date:  2007-06-15       Impact factor: 11.361

Review 4.  The role of interactions between phage and bacterial proteins within the infected cell: a diverse and puzzling interactome.

Authors:  Bart Roucourt; Rob Lavigne
Journal:  Environ Microbiol       Date:  2009-08-18       Impact factor: 5.491

5.  The intron-containing genome of the lytic Pseudomonas phage LUZ24 resembles the temperate phage PaP3.

Authors:  Pieter-Jan Ceyssens; Kirsten Hertveldt; Hans-W Ackermann; Jean-Paul Noben; Mekonnen Demeke; Guido Volckaert; Rob Lavigne
Journal:  Virology       Date:  2008-06-02       Impact factor: 3.616

6.  Integration host factor alleviates the H-NS-mediated repression of the early promoter of bacteriophage Mu.

Authors:  P van Ulsen; M Hillebrand; L Zulianello; P van de Putte; N Goosen
Journal:  Mol Microbiol       Date:  1996-08       Impact factor: 3.501

Review 7.  Genomic looping: a key principle of chromatin organization.

Authors:  Ramon A van der Valk; Jocelyne Vreede; Frédéric Crémazy; Remus T Dame
Journal:  J Mol Microbiol Biotechnol       Date:  2015-02-17

Review 8.  Genome architecture and global gene regulation in bacteria: making progress towards a unified model?

Authors:  Charles J Dorman
Journal:  Nat Rev Microbiol       Date:  2013-04-03       Impact factor: 60.633

9.  Structural basis for osmotic regulation of the DNA binding properties of H-NS proteins.

Authors:  Liang Qin; Fredj Ben Bdira; Yann G J Sterckx; Alexander N Volkov; Jocelyne Vreede; Gabriele Giachin; Peter van Schaik; Marcellus Ubbink; Remus T Dame
Journal:  Nucleic Acids Res       Date:  2020-02-28       Impact factor: 16.971

10.  A broad-host-range Flp-FRT recombination system for site-specific excision of chromosomally-located DNA sequences: application for isolation of unmarked Pseudomonas aeruginosa mutants.

Authors:  T T Hoang; R R Karkhoff-Schweizer; A J Kutchma; H P Schweizer
Journal:  Gene       Date:  1998-05-28       Impact factor: 3.688

View more
  1 in total

1.  Xenogeneic nucleoid-associated EnrR thwarts H-NS silencing of bacterial virulence with unique DNA binding.

Authors:  Ruiqing Ma; Yabo Liu; Jianhua Gan; Haoxian Qiao; Jiabao Ma; Yi Zhang; Yifan Bu; Shuai Shao; Yuanxing Zhang; Qiyao Wang
Journal:  Nucleic Acids Res       Date:  2022-04-22       Impact factor: 16.971

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.