Literature DB >> 34504014

Structural changes in bacteriophage T7 upon receptor-induced genome ejection.

Wenyuan Chen1,2, Hao Xiao1,3, Li Wang4, Xurong Wang1, Zhixue Tan1, Zhen Han1, Xiaowu Li5, Fan Yang1, Zhonghua Liu2, Jingdong Song6, Hongrong Liu7, Lingpeng Cheng7,8.   

Abstract

Many tailed bacteriophages assemble ejection proteins and a portal-tail complex at a unique vertex of the capsid. The ejection proteins form a transenvelope channel extending the portal-tail channel for the delivery of genomic DNA in cell infection. Here, we report the structure of the mature bacteriophage T7, including the ejection proteins, as well as the structures of the full and empty T7 particles in complex with their cell receptor lipopolysaccharide. Our near-atomic-resolution reconstruction shows that the ejection proteins in the mature T7 assemble into a core, which comprises a fourfold gene product 16 (gp16) ring, an eightfold gp15 ring, and a putative eightfold gp14 ring. The gp15 and gp16 are mainly composed of helix bundles, and gp16 harbors a lytic transglycosylase domain for degrading the bacterial peptidoglycan layer. When interacting with the lipopolysaccharide, the T7 tail nozzle opens. Six copies of gp14 anchor to the tail nozzle, extending the nozzle across the lipopolysaccharide lipid bilayer. The structures of gp15 and gp16 in the mature T7 suggest that they should undergo remarkable conformational changes to form the transenvelope channel. Hydrophobic α-helices were observed in gp16 but not in gp15, suggesting that gp15 forms the channel in the hydrophilic periplasm and gp16 forms the channel in the cytoplasmic membrane.

Entities:  

Keywords:  bacteriophages; ejection proteins; genome delivery; lipopolysaccharide

Mesh:

Substances:

Year:  2021        PMID: 34504014      PMCID: PMC8449382          DOI: 10.1073/pnas.2102003118

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  63 in total

1.  Maturation of phage T7 involves structural modification of both shell and inner core components.

Authors:  Xabier Agirrezabala; Jaime Martín-Benito; José R Castón; Roberto Miranda; José María Valpuesta; José L Carrascosa
Journal:  EMBO J       Date:  2005-10-06       Impact factor: 11.598

2.  Changes in bacteriophage T7 virion structure at the initiation of infection.

Authors:  Priscilla Kemp; L René Garcia; Ian J Molineux
Journal:  Virology       Date:  2005-09-30       Impact factor: 3.616

3.  Encapsidated conformation of bacteriophage T7 DNA.

Authors:  M E Cerritelli; N Cheng; A H Rosenberg; C E McPherson; F P Booy; A C Steven
Journal:  Cell       Date:  1997-10-17       Impact factor: 41.582

Review 4.  Targeting mechanisms of tailed bacteriophages.

Authors:  Franklin L Nobrega; Marnix Vlot; Patrick A de Jonge; Lisa L Dreesens; Hubertus J E Beaumont; Rob Lavigne; Bas E Dutilh; Stan J J Brouns
Journal:  Nat Rev Microbiol       Date:  2018-12       Impact factor: 60.633

5.  Visualization of uncorrelated, tandem symmetry mismatches in the internal genome packaging apparatus of bacteriophage T7.

Authors:  Fei Guo; Zheng Liu; Frank Vago; Yue Ren; Weimin Wu; Elena T Wright; Philip Serwer; Wen Jiang
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-11       Impact factor: 11.205

6.  Cryo-EM Elucidation of the Structure of Bacteriophage P22 Virions after Genome Release.

Authors:  Reginald McNulty; Giovanni Cardone; Eddie B Gilcrease; Timothy S Baker; Sherwood R Casjens; John E Johnson
Journal:  Biophys J       Date:  2018-03-27       Impact factor: 4.033

7.  Visualizing the structural changes of bacteriophage Epsilon15 and its Salmonella host during infection.

Authors:  Juan T Chang; Michael F Schmid; Cameron Haase-Pettingell; Peter R Weigele; Jonathan A King; Wah Chiu
Journal:  J Mol Biol       Date:  2010-08-13       Impact factor: 5.469

8.  Conformational changes leading to T7 DNA delivery upon interaction with the bacterial receptor.

Authors:  Verónica A González-García; Mar Pulido-Cid; Carmela Garcia-Doval; Rebeca Bocanegra; Mark J van Raaij; Jaime Martín-Benito; Ana Cuervo; José L Carrascosa
Journal:  J Biol Chem       Date:  2015-02-19       Impact factor: 5.157

9.  Structural changes in a marine podovirus associated with release of its genome into Prochlorococcus.

Authors:  Xiangan Liu; Qinfen Zhang; Kazuyoshi Murata; Matthew L Baker; Matthew B Sullivan; Caroline Fu; Matthew T Dougherty; Michael F Schmid; Marcia S Osburne; Sallie W Chisholm; Wah Chiu
Journal:  Nat Struct Mol Biol       Date:  2010-06-13       Impact factor: 15.369

10.  Gp15 and gp16 cooperate in translocating bacteriophage T7 DNA into the infected cell.

Authors:  Chung-Yu Chang; Priscilla Kemp; Ian J Molineux
Journal:  Virology       Date:  2009-12-29       Impact factor: 3.616

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  3 in total

1.  Cryo-EM Structure of a Kinetically Trapped Dodecameric Portal Protein from the Pseudomonas-phage PaP3.

Authors:  Chun-Feng David Hou; Nicholas A Swanson; Fenglin Li; Ruoyu Yang; Ravi K Lokareddy; Gino Cingolani
Journal:  J Mol Biol       Date:  2022-03-09       Impact factor: 6.151

2.  Tall tails: cryo-electron microscopy of phage tail DNA ejection conduits.

Authors:  Joshua M Hardy; Rhys A Dunstan; Trevor Lithgow; Fasséli Coulibaly
Journal:  Biochem Soc Trans       Date:  2022-02-28       Impact factor: 4.919

Review 3.  Viral Ejection Proteins: Mosaically Conserved, Conformational Gymnasts.

Authors:  Nicholas A Swanson; Chun-Feng D Hou; Gino Cingolani
Journal:  Microorganisms       Date:  2022-02-24
  3 in total

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