Literature DB >> 34495504

Functional Characterization of Silkworm PIWI Proteins by Embryonic RNAi.

Takashi Kiuchi1, Susumu Katsuma2.   

Abstract

The molecular mechanisms of sex-determination systems among insect orders and species are diverse. Therefore, genes involved in sex determination are strong candidates for insect pest management. Even though lepidopterans are major agricultural insect pests that cause widespread economic damage to various crops, their sex-determination systems have not been fully elucidated, even in the silkworm (Bombyx mori), a model lepidopteran insect. In 2014, we found that a female-specific W chromosome-derived PIWI-interacting RNA (piRNA) determines femaleness in silkworms. To analyze the function of two core silkworm piRNA biogenesis pathway genes, Siwi and BmAgo3, in the sex-determination system, we developed a genomic DNA and total RNA extraction strategy for a siRNA-injected single embryo. The siRNA-injected embryo can be molecularly sexed by W chromosome-specific DNA markers. Using complementary DNA (cDNA) reverse transcribed from the sexed RNA, we evaluated the knockdown effect of the PIWI protein-coding genes on a sexual development-related gene, Bombyx mori doublesex.
© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  BmAgo3; Bombyx mori; Bombyx mori doublesex; Embryonic RNAi; PIWI-interacting RNAs; Sex determination; Siwi

Mesh:

Substances:

Year:  2022        PMID: 34495504     DOI: 10.1007/978-1-0716-1633-8_3

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  15 in total

1.  Identification and Functional Analysis of the Pre-piRNA 3' Trimmer in Silkworms.

Authors:  Natsuko Izumi; Keisuke Shoji; Yuriko Sakaguchi; Shozo Honda; Yohei Kirino; Tsutomu Suzuki; Susumu Katsuma; Yukihide Tomari
Journal:  Cell       Date:  2016-02-25       Impact factor: 41.582

Review 2.  piRNA-Guided Genome Defense: From Biogenesis to Silencing.

Authors:  Benjamin Czech; Marzia Munafò; Filippo Ciabrelli; Evelyn L Eastwood; Martin H Fabry; Emma Kneuss; Gregory J Hannon
Journal:  Annu Rev Genet       Date:  2018-11-23       Impact factor: 16.830

3.  The silkworm W chromosome is a source of female-enriched piRNAs.

Authors:  Shinpei Kawaoka; Koji Kadota; Yuji Arai; Yutaka Suzuki; Tsuguru Fujii; Hiroaki Abe; Yuji Yasukochi; Kazuei Mita; Sumio Sugano; Kentaro Shimizu; Yukihide Tomari; Toru Shimada; Susumu Katsuma
Journal:  RNA       Date:  2011-10-21       Impact factor: 4.942

4.  Crystal Structure of Silkworm PIWI-Clade Argonaute Siwi Bound to piRNA.

Authors:  Naoki Matsumoto; Hiroshi Nishimasu; Kazuhiro Sakakibara; Kazumichi M Nishida; Takamasa Hirano; Ryuichiro Ishitani; Haruhiko Siomi; Mikiko C Siomi; Osamu Nureki
Journal:  Cell       Date:  2016-09-29       Impact factor: 41.582

5.  A homologue of the Drosophila doublesex gene is transcribed into sex-specific mRNA isoforms in the silkworm, Bombyx mori.

Authors:  F Ohbayashi; M G Suzuki; K Mita; K Okano; T Shimada
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2001-01       Impact factor: 2.231

6.  Developmentally synchronized expression of two Bombyx mori Piwi subfamily genes, SIWI and BmAGO3 in germ-line cells.

Authors:  Shinpei Kawaoka; Kosuke Minami; Susumu Katsuma; Kazuei Mita; Toru Shimada
Journal:  Biochem Biophys Res Commun       Date:  2008-01-10       Impact factor: 3.575

7.  RNA clamping by Vasa assembles a piRNA amplifier complex on transposon transcripts.

Authors:  Jordi Xiol; Pietro Spinelli; Maike A Laussmann; David Homolka; Zhaolin Yang; Elisa Cora; Yohann Couté; Simon Conn; Jan Kadlec; Ravi Sachidanandam; Marko Kaksonen; Stephen Cusack; Anne Ephrussi; Ramesh S Pillai
Journal:  Cell       Date:  2014-06-05       Impact factor: 41.582

8.  A single female-specific piRNA is the primary determiner of sex in the silkworm.

Authors:  Takashi Kiuchi; Hikaru Koga; Munetaka Kawamoto; Keisuke Shoji; Hiroki Sakai; Yuji Arai; Genki Ishihara; Shinpei Kawaoka; Sumio Sugano; Toru Shimada; Yutaka Suzuki; Masataka G Suzuki; Susumu Katsuma
Journal:  Nature       Date:  2014-05-14       Impact factor: 49.962

9.  The Bombyx ovary-derived cell line endogenously expresses PIWI/PIWI-interacting RNA complexes.

Authors:  Shinpei Kawaoka; Nobumitsu Hayashi; Yutaka Suzuki; Hiroaki Abe; Sumio Sugano; Yukihide Tomari; Toru Shimada; Susumu Katsuma
Journal:  RNA       Date:  2009-05-21       Impact factor: 4.942

10.  Zucchini consensus motifs determine the mechanism of pre-piRNA production.

Authors:  Natsuko Izumi; Keisuke Shoji; Yutaka Suzuki; Susumu Katsuma; Yukihide Tomari
Journal:  Nature       Date:  2020-01-29       Impact factor: 49.962

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  1 in total

1.  Masculinizer-induced dosage compensation is achieved by transcriptional downregulation of both copies of Z-linked genes in the silkworm, Bombyx mori.

Authors:  Kenta Tomihara; Munetaka Kawamoto; Yutaka Suzuki; Susumu Katsuma; Takashi Kiuchi
Journal:  Biol Lett       Date:  2022-09-07       Impact factor: 3.812

  1 in total

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