Literature DB >> 34494100

TaqMan Array Card testing of participant-collected stool smears to determine the pathogen-specific epidemiology of travellers' diarrhoea†.

Michele D Tisdale, David R Tribble, Indrani Mitra, Kalyani Telu, Huai-Ching Kuo, Jamie A Fraser, Jie Liu, Eric R Houpt, Mark S Riddle, Drake H Tilley, Anjali N Kunz, Heather C Yun, Charla C Geist, Tahaniyat Lalani.   

Abstract

BACKGROUND: We assessed the compliance with self-collection of stool smears on Whatman® FTA® Elute Card (FTA Card) and detection of travellers' diarrhoea (TD)-associated pathogens by using a quantitative Polymerase Chain Reaction (PCR) assay [customized TaqMan® array card (TAC)] in a prospective, observational cohort of travellers.
METHODS: Enrolled travellers documented symptoms on a travel diary and collected an FTA Card during a diarrhoeal episode, or at the end of travel if they remained asymptomatic. TAC testing was performed on FTA Cards from TD cases and 1:1 matched asymptomatic controls and 1:1 matched loose stool cases that did not meet TD criteria. Odds ratios were used to determine the association between detected pathogens and TD.
RESULTS: Of 2456 travellers, 484 (19.7%) completed an illness diary and met TD criteria, and 257 (53.1%) collected an FTA Card during the TD episode. FTA Cards were stored for a median of 2 years at room temperature (IQR: 1-4 years) before extraction and testing. The overall TAC detection rate in TD cases was 58.8% (95% CI: 52.5-64.8). Enterotoxigenic Escherichia coli was the most common pathogen in TD cases (26.8%), and 3.5% of samples were positive for norovirus. The odds of detecting TD-associated pathogens in 231 matched cases and asymptomatic controls were 5.4 (95% CI: 3.6-8.1) and 2.0 (95% CI: 1.1-3.7) in 121 matched TD and loose stool cases (P < 0.05). Enteroaggregative E. coli was the most common pathogen detected in asymptomatic controls and loose stool cases. Detection of diarrhoeagenic E. coli, Shigella/enteroinvasive E. coli and Campylobacter spp. was significantly associated with TD.
CONCLUSION: FTA Cards are a useful adjunct to traditional stool collection methods for evaluating the pathogen-specific epidemiology of TD in austere environments. Qualitative detection of pathogens was associated with TD. Measures to improve compliance and quality of FTA Card collection with decreased storage duration may further optimize detection.
© The Author(s) 2021. Published by Oxford University Press on behalf of International Society of Travel Medicine. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  PCR; TaqMan Array Card; Travellers’ diarrhoea; Whatman FTA Elute; enteropathogen

Mesh:

Year:  2022        PMID: 34494100      PMCID: PMC8763119          DOI: 10.1093/jtm/taab138

Source DB:  PubMed          Journal:  J Travel Med        ISSN: 1195-1982            Impact factor:   39.194


  25 in total

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Authors:  Zhi-Dong Jiang; Brett Lowe; M P Verenkar; David Ashley; Robert Steffen; Nadia Tornieporth; Frank von Sonnenburg; Peter Waiyaki; Herbert L DuPont
Journal:  J Infect Dis       Date:  2002-01-22       Impact factor: 5.226

2.  Aetiology of traveller's diarrhea: A nested case-control study.

Authors:  Frieder Schaumburg; Carlos L Correa-Martinez; Silke Niemann; Robin Köck; Karsten Becker
Journal:  Travel Med Infect Dis       Date:  2020-04-25       Impact factor: 6.211

3.  Spectrum of enteropathogens in cases of traveler's diarrhea that were detected using the FilmArray GI panel: New epidemiology in Japan.

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Journal:  J Infect Chemother       Date:  2020-08-22       Impact factor: 2.211

4.  Controlled study on enteropathogens in travellers returning from the tropics with and without diarrhoea.

Authors:  C Paschke; N Apelt; E Fleischmann; P Perona; C Walentiny; T Löscher; K-H Herbinger
Journal:  Clin Microbiol Infect       Date:  2010-12-13       Impact factor: 8.067

5.  Epidemiology and etiology of Traveler's diarrhea in Bangkok, Thailand, a case-control study.

Authors:  Ladaporn Bodhidatta; Sinn Anuras; Siriporn Sornsakrin; Umaporn Suksawad; Oralak Serichantalergs; Apichai Srijan; Orntipa Sethabutr; Carl J Mason
Journal:  Trop Dis Travel Med Vaccines       Date:  2019-06-07

6.  Surveillance of Food- and Smear-Transmitted Pathogens in European Soldiers with Diarrhea on Deployment in the Tropics: Experience from the European Union Training Mission (EUTM) Mali.

Authors:  Hagen Frickmann; Philipp Warnke; Claudia Frey; Salvatore Schmidt; Christian Janke; Kay Erkens; Ulrich Schotte; Thomas Köller; Winfried Maaßen; Andreas Podbielski; Alfred Binder; Rebecca Hinz; Benjamin Queyriaux; Dorothea Wiemer; Norbert Georg Schwarz; Ralf Matthias Hagen
Journal:  Biomed Res Int       Date:  2015-10-11       Impact factor: 3.411

7.  Direct Dried Stool Sampling on Filter Paper for Molecular Analyses of Cholera.

Authors:  Stanislas Rebaudet; Sandra Moore; Anne-Cécile Normand; Lamine Koivogui; Eric Garnotel; Amara Jambai; Renaud Piarroux
Journal:  Am J Trop Med Hyg       Date:  2016-07-06       Impact factor: 2.345

8.  Optimization of Quantitative PCR Methods for Enteropathogen Detection.

Authors:  Jie Liu; Jean Gratz; Caroline Amour; Rosemary Nshama; Thomas Walongo; Athanasia Maro; Esto Mduma; James Platts-Mills; Nadia Boisen; James Nataro; Doris M Haverstick; Furqan Kabir; Paphavee Lertsethtakarn; Sasikorn Silapong; Pimmada Jeamwattanalert; Ladaporn Bodhidatta; Carl Mason; Sharmin Begum; Rashidul Haque; Ira Praharaj; Gagandeep Kang; Eric R Houpt
Journal:  PLoS One       Date:  2016-06-23       Impact factor: 3.240

9.  Evaluation in Cameroon of a Novel, Simplified Methodology to Assist Molecular Microbiological Analysis of V. cholerae in Resource-Limited Settings.

Authors:  Amanda K Debes; Jerome Ateudjieu; Etienne Guenou; Etiene Guenou; Anna Lena Lopez; Mark Philip Bugayong; Pearl Joy Retiban; Marcelino Garrine; Inacio Mandomando; Shan Li; O Colin Stine; David A Sack
Journal:  PLoS Negl Trop Dis       Date:  2016-01-06

10.  Comparison of stool collection and storage on Whatman FTA Elute cards versus frozen stool for enteropathogen detection using the TaqMan Array Card PCR assay.

Authors:  Tahaniyat Lalani; Michele D Tisdale; Jie Liu; Indrani Mitra; Cliff Philip; Elizabeth Odundo; Faviola Reyes; Mark P Simons; Jamie A Fraser; Emma Hutley; Patrick Connor; Brett E Swierczewski; Eric Houpt; David R Tribble; Mark S Riddle
Journal:  PLoS One       Date:  2018-08-30       Impact factor: 3.240

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