Literature DB >> 34475219

Structural basis of P[II] rotavirus evolution and host ranges under selection of histo-blood group antigens.

Shenyuan Xu1,2, Kristen Rose McGinnis1, Yang Liu3, Pengwei Huang4, Ming Tan4,5, Michael Robert Stuckert1, Riley Erin Burnside1, Elsa Grace Jacob1, Shuisong Ni1, Xi Jiang6,5, Michael A Kennedy7.   

Abstract

Group A rotaviruses cause severe gastroenteritis in infants and young children worldwide, with P[II] genogroup rotaviruses (RVs) responsible for >90% of global cases. RVs have diverse host ranges in different human and animal populations determined by host histo-blood group antigen (HBGA) receptor polymorphism, but details governing diversity, host ranges, and species barriers remain elusive. In this study, crystal structures of complexes of the major P[II] genogroup P[4] and P[8] genotype RV VP8* receptor-binding domains together with Lewis epitope-containing LNDFH I glycans in combination with VP8* receptor-glycan ligand affinity measurements based on NMR titration experiments revealed the structural basis for RV genotype-specific switching between ββ and βα HBGA receptor-binding sites that determine RV host ranges. The data support the hypothesis that P[II] RV evolution progressed from animals to humans under the selection of type 1 HBGAs guided by stepwise host synthesis of type 1 ABH and Lewis HBGAs. The results help explain disease burden, species barriers, epidemiology, and limited efficacy of current RV vaccines in developing countries. The structural data has the potential to impact the design of future vaccine strategies against RV gastroenteritis.

Entities:  

Keywords:  LNDFH I; P[8]; histo-blood group antigen; protein crystallography; rotavirus

Mesh:

Substances:

Year:  2021        PMID: 34475219      PMCID: PMC8433580          DOI: 10.1073/pnas.2107963118

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  63 in total

1.  UCSF Chimera--a visualization system for exploratory research and analysis.

Authors:  Eric F Pettersen; Thomas D Goddard; Conrad C Huang; Gregory S Couch; Daniel M Greenblatt; Elaine C Meng; Thomas E Ferrin
Journal:  J Comput Chem       Date:  2004-10       Impact factor: 3.376

2.  Microseed matrix screening for optimization in protein crystallization: what have we learned?

Authors:  Allan D'Arcy; Terese Bergfors; Sandra W Cowan-Jacob; May Marsh
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-08-29       Impact factor: 1.056

3.  Human P[6] Rotaviruses From Sub-Saharan Africa and Southeast Asia Are Closely Related to Those of Human P[4] and P[8] Rotaviruses Circulating Worldwide.

Authors:  Elisabeth Heylen; Mark Zeller; Max Ciarlet; Jody Lawrence; Duncan Steele; Marc Van Ranst; Jelle Matthijnssens
Journal:  J Infect Dis       Date:  2016-07-28       Impact factor: 5.226

4.  Spike protein VP8* of human rotavirus recognizes histo-blood group antigens in a type-specific manner.

Authors:  Pengwei Huang; Ming Xia; Ming Tan; Weiming Zhong; Chao Wei; Leyi Wang; Ardythe Morrow; Xi Jiang
Journal:  J Virol       Date:  2012-02-15       Impact factor: 5.103

5.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  The first identification of rare human group A rotavirus strain G3P[10] with severe infantile diarrhea in eastern India.

Authors:  Anupam Mukherjee; Satarupa Mullick; Nobumichi Kobayashi; Mamta Chawla-Sarkar
Journal:  Infect Genet Evol       Date:  2012-09-06       Impact factor: 3.342

7.  Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG).

Authors:  Jelle Matthijnssens; Max Ciarlet; Sarah M McDonald; Houssam Attoui; Krisztián Bányai; J Rodney Brister; Javier Buesa; Mathew D Esona; Mary K Estes; Jon R Gentsch; Miren Iturriza-Gómara; Reimar Johne; Carl D Kirkwood; Vito Martella; Peter P C Mertens; Osamu Nakagomi; Viviana Parreño; Mustafizur Rahman; Franco M Ruggeri; Linda J Saif; Norma Santos; Andrej Steyer; Koki Taniguchi; John T Patton; Ulrich Desselberger; Marc Van Ranst
Journal:  Arch Virol       Date:  2011-05-20       Impact factor: 2.574

8.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

9.  Public health impact of accelerated immunization against rotavirus infection among children aged less than 6 months in the United States.

Authors:  Derek Weycker; Mark Andrew Atwood; Baudouin Standaert; Girishanthy Krishnarajah
Journal:  Hum Vaccin Immunother       Date:  2014       Impact factor: 3.452

10.  P[8] and P[4] Rotavirus Infection Associated with Secretor Phenotypes Among Children in South China.

Authors:  Xu-Fu Zhang; Yan Long; Ming Tan; Ting Zhang; Qiong Huang; Xi Jiang; Wen-Fang Tan; Jian-Dong Li; Gui-Fang Hu; Shixing Tang; Ying-Chun Dai
Journal:  Sci Rep       Date:  2016-10-06       Impact factor: 4.379

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  4 in total

Review 1.  Emerging viruses: Cross-species transmission of coronaviruses, filoviruses, henipaviruses, and rotaviruses from bats.

Authors:  Jin Tian; Jiumeng Sun; Dongyan Li; Ningning Wang; Lifang Wang; Chang Zhang; Xiaorong Meng; Xiang Ji; Marc A Suchard; Xu Zhang; Alexander Lai; Shuo Su; Michael Veit
Journal:  Cell Rep       Date:  2022-05-30       Impact factor: 9.995

2.  A Pseudovirus Nanoparticle-Based Trivalent Rotavirus Vaccine Candidate Elicits High and Cross P Type Immune Response.

Authors:  Ming Xia; Pengwei Huang; Ming Tan
Journal:  Pharmaceutics       Date:  2022-07-30       Impact factor: 6.525

Review 3.  The Role of Host Glycobiology and Gut Microbiota in Rotavirus and Norovirus Infection, an Update.

Authors:  Nazaret Peña-Gil; Cristina Santiso-Bellón; Roberto Gozalbo-Rovira; Javier Buesa; Vicente Monedero; Jesús Rodríguez-Díaz
Journal:  Int J Mol Sci       Date:  2021-12-15       Impact factor: 5.923

Review 4.  Serological Humoral Immunity Following Natural Infection of Children with High Burden Gastrointestinal Viruses.

Authors:  Mark R Zweigart; Sylvia Becker-Dreps; Filemón Bucardo; Fredman González; Ralph S Baric; Lisa C Lindesmith
Journal:  Viruses       Date:  2021-10-09       Impact factor: 5.048

  4 in total

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