Literature DB >> 34435228

Radiomics: a primer on high-throughput image phenotyping.

Kyle J Lafata1,2,3, Yuqi Wang4, Brandon Konkel5, Fang-Fang Yin6, Mustafa R Bashir5,7.   

Abstract

Radiomics is a high-throughput approach to image phenotyping. It uses computer algorithms to extract and analyze a large number of quantitative features from radiological images. These radiomic features collectively describe unique patterns that can serve as digital fingerprints of disease. They may also capture imaging characteristics that are difficult or impossible to characterize by the human eye. The rapid development of this field is motivated by systems biology, facilitated by data analytics, and powered by artificial intelligence. Here, as part of Abdominal Radiology's special issue on Quantitative Imaging, we provide an introduction to the field of radiomics. The technique is formally introduced as an advanced application of data analytics, with illustrating examples in abdominal radiology. Artificial intelligence is then presented as the main driving force of radiomics, and common techniques are defined and briefly compared. The complete step-by-step process of radiomic phenotyping is then broken down into five key phases. Potential pitfalls of each phase are highlighted, and recommendations are provided to reduce sources of variation, non-reproducibility, and error associated with radiomics.
© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Artificial intelligence; Biomarkers; Image-based phenotyping; Machine learning; Radiomics

Mesh:

Year:  2021        PMID: 34435228     DOI: 10.1007/s00261-021-03254-x

Source DB:  PubMed          Journal:  Abdom Radiol (NY)


  103 in total

Review 1.  Characterizing multi-omic data in systems biology.

Authors:  Christopher E Mason; Sandra G Porter; Todd M Smith
Journal:  Adv Exp Med Biol       Date:  2014       Impact factor: 2.622

2.  Radiomics: a new application from established techniques.

Authors:  Vishwa Parekh; Michael A Jacobs
Journal:  Expert Rev Precis Med Drug Dev       Date:  2016-03-31

Review 3.  Systems biology primer: the basic methods and approaches.

Authors:  Iman Tavassoly; Joseph Goldfarb; Ravi Iyengar
Journal:  Essays Biochem       Date:  2018-10-26       Impact factor: 8.000

4.  Texture Analysis and Machine Learning for Detecting Myocardial Infarction in Noncontrast Low-Dose Computed Tomography: Unveiling the Invisible.

Authors:  Manoj Mannil; Jochen von Spiczak; Robert Manka; Hatem Alkadhi
Journal:  Invest Radiol       Date:  2018-06       Impact factor: 6.016

Review 5.  Systems biology for hepatologists.

Authors:  José M Mato; M Luz Martínez-Chantar; Shelly C Lu
Journal:  Hepatology       Date:  2014-06-18       Impact factor: 17.425

Review 6.  Radiomics: the process and the challenges.

Authors:  Virendra Kumar; Yuhua Gu; Satrajit Basu; Anders Berglund; Steven A Eschrich; Matthew B Schabath; Kenneth Forster; Hugo J W L Aerts; Andre Dekker; David Fenstermacher; Dmitry B Goldgof; Lawrence O Hall; Philippe Lambin; Yoganand Balagurunathan; Robert A Gatenby; Robert J Gillies
Journal:  Magn Reson Imaging       Date:  2012-08-13       Impact factor: 2.546

Review 7.  Radiomics: extracting more information from medical images using advanced feature analysis.

Authors:  Philippe Lambin; Emmanuel Rios-Velazquez; Ralph Leijenaar; Sara Carvalho; Ruud G P M van Stiphout; Patrick Granton; Catharina M L Zegers; Robert Gillies; Ronald Boellard; André Dekker; Hugo J W L Aerts
Journal:  Eur J Cancer       Date:  2012-01-16       Impact factor: 9.162

Review 8.  Applications and limitations of radiomics.

Authors:  Stephen S F Yip; Hugo J W L Aerts
Journal:  Phys Med Biol       Date:  2016-06-08       Impact factor: 3.609

9.  Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach.

Authors:  Hugo J W L Aerts; Emmanuel Rios Velazquez; Ralph T H Leijenaar; Chintan Parmar; Patrick Grossmann; Sara Carvalho; Sara Cavalho; Johan Bussink; René Monshouwer; Benjamin Haibe-Kains; Derek Rietveld; Frank Hoebers; Michelle M Rietbergen; C René Leemans; Andre Dekker; John Quackenbush; Robert J Gillies; Philippe Lambin
Journal:  Nat Commun       Date:  2014-06-03       Impact factor: 14.919

10.  Radiomics: Images Are More than Pictures, They Are Data.

Authors:  Robert J Gillies; Paul E Kinahan; Hedvig Hricak
Journal:  Radiology       Date:  2015-11-18       Impact factor: 11.105

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  4 in total

1.  Development of a radiomics model to diagnose pheochromocytoma preoperatively: a multicenter study with prospective validation.

Authors:  Jianqiu Kong; Junjiong Zheng; Jieying Wu; Shaoxu Wu; Jinhua Cai; Xiayao Diao; Weibin Xie; Xiong Chen; Hao Yu; Lifang Huang; Hongpeng Fang; Xinxiang Fan; Haide Qin; Yong Li; Zhuo Wu; Jian Huang; Tianxin Lin
Journal:  J Transl Med       Date:  2022-01-15       Impact factor: 5.531

2.  Radiomics-Based Image Phenotyping of Kidney Apparent Diffusion Coefficient Maps: Preliminary Feasibility & Efficacy.

Authors:  Lu-Ping Li; Alexander S Leidner; Emily Wilt; Artem Mikheev; Henry Rusinek; Stuart M Sprague; Orly F Kohn; Anand Srivastava; Pottumarthi V Prasad
Journal:  J Clin Med       Date:  2022-04-01       Impact factor: 4.241

3.  Photon Counting CT and Radiomic Analysis Enables Differentiation of Tumors Based on Lymphocyte Burden.

Authors:  Alex J Allphin; Yvonne M Mowery; Kyle J Lafata; Darin P Clark; Alex M Bassil; Rico Castillo; Diana Odhiambo; Matthew D Holbrook; Ketan B Ghaghada; Cristian T Badea
Journal:  Tomography       Date:  2022-03-10

4.  A radiomics-boosted deep-learning model for COVID-19 and non-COVID-19 pneumonia classification using chest x-ray images.

Authors:  Zongsheng Hu; Zhenyu Yang; Kyle J Lafata; Fang-Fang Yin; Chunhao Wang
Journal:  Med Phys       Date:  2022-03-15       Impact factor: 4.506

  4 in total

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