| Literature DB >> 34418317 |
Yan-Yan Li1,2, Hui Wang3, Yang-Yang Zhang4.
Abstract
It has been implied that there is a possible relationship between cyclin-dependent protein kinase inhibitors antisense RNA 1 (CDKN2B-AS1) gene rs4977574 A/G polymorphism and coronary heart disease (CHD) susceptibility. However, as the research results are discrepant, no distinct consensus on this issue has been reached so far. In order to further elaborate the latent association of the CDKN2B-AS1 gene rs4977574 A/G polymorphism and CHD, this present meta-analysis was conducted. There were 40,979 subjects of 17 individual studies in the present meta-analysis. The pooled odds ratios (ORs) and their corresponding 95% confidence intervals (CIs) were estimated to determine the association strength. Considering the significant heterogeneity among the individual studies, the random-effect models were used. In the current meta-analysis, a significant association between CDKN2B-AS1 gene rs4977574 A/G polymorphism and CHD was found under allelic (OR: 1.18, 95% CI: 1.08-1.29, p = 4.83×10-4 ), recessive (OR: 1.36, 95% CI: 1.11-1.67, p = 0.003), dominant (OR: 0.71, 95% CI: 0.58-0.86, p = 6.26×10-4 ), heterozygous (OR:1.210, 95% CI: 1.076-1.360, p = 0.001), homozygous (OR: 1.394, 95% CI: 1.163-1.671, p = 3.31×10-4 ) and additive (OR: 1.180, 95% CI: 1.075-1.295, p = 4.83×10-4 ) genetic models. A more significant association between them was found in the Asian population than that in the whole population under these genetic models (p < 0.05). However, no significant association between them was found in the Caucasian population (p > 0.05). CDKN2B-AS1 gene rs4977574 A/G polymorphism was associated with CHD susceptibility, especially in the Asian population. G allele of CDKN2B-AS1 gene rs4977574 A/G polymorphism is the risk allele for CHD.Entities:
Keywords: zzm321990CDKN2B-AS1zzm321990; coronary heart disease; gene; polymorphism; rs4977574
Mesh:
Substances:
Year: 2021 PMID: 34418317 PMCID: PMC8435436 DOI: 10.1111/jcmm.16849
Source DB: PubMed Journal: J Cell Mol Med ISSN: 1582-1838 Impact factor: 5.310
Characteristics of the association between theCDKN2B‐AS1 gene rs4977574 A/G polymorphism and CHD
| Author | Year | Region | Ethnicity | CHD | Control | Matching criteria | Source of control | NOS score | Genotyping method | sample size (CHD/control) | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AA | AG | GG | AA | AG | GG | |||||||||
| Sakalar C | 2013 | Turkey | Caucasian | 8 | 22 | 14 | 13 | 11 | 4 | Age, sex, hypertension, diabetes, hyperlipidaemia family history, ethnicity | HB | 6 | PCR‐RFLP | 44/28 |
| Helgadottir A | 2007 | Iceland | Caucasian | 554 | 1105 | 556 | 1507 | 2335 | 964 | Ethnicity | PB | 6 | PCR‐sequencing | 2215/4806 |
| Helgadottir A | 2007 | Philadelphia | Caucasian | 103 | 286 | 180 | 130 | 246 | 119 | Ethnicity | PB | 6 | PCR‐sequencing | 569/495 |
| Helgadottir A | 2007 | Atlanta | Caucasian | 115 | 274 | 188 | 332 | 597 | 325 | Ethnicity | PB | 6 | PCR‐sequencing | 577/1254 |
| Helgadottir A | 2007 | Durham | Caucasian | 267 | 549 | 316 | 187 | 383 | 144 | Ethnicity | PB | 6 | PCR‐sequencing | 1132/714 |
| KalpanaB | 2019 | India | Asian | 23 | 36 | 31 | 106 | 230 | 100 | Hyperlipidaemia, weight, alcohol, ethnicity, smoking, exercise, fruits intake, family history | PB | 6 | Mass Array Technology | 90/436 |
| Hua L | 2020 | China | Asian | 149 | 297 | 152 | 87 | 122 | 48 | Drinking, TC, TG, LDL‐C, Apo B, Bun, ethnicity | HB | 6 | Mass Array SNP typing | 598/257 |
| SamaniNJ | 2007 | UK | WTCCC(Caucasian) | 605 | 937 | 382 | 698 | 1435 | 804 | Ethnicity | PB | 6 | Affymetrix 500K | 1924/2937 |
| SamaniNJ | 2007 | UK | German MI study (Caucasian) | 169 | 452 | 239 | 463 | 826 | 354 | Ethnicity | PB | 6 | Affymetrix 500K | 860/1643 |
| Saade S | 2011 | Lebanon | Asian | 208 | 685 | 627 | 72 | 195 | 156 | TC, LDL‐C, LogTG, ethnicity, BMI | PB | 6 | Illumina chips | 1520/423 |
| Zheng Y | 2016 | China | Asian | 422 | 795 | 343 | 540 | 891 | 320 | Age, sex, physical activity, prevalent cholesterolaemia, urban area of residence, individual European admixture proportion | PB | 6 | PCR‐ASP | 1560/1751 |
| Qiao L | 2017 | China | Asian | 43 | 114 | 69 | 26 | 35 | 18 | Age, BMI,TC,LDL‐C, HDL‐C, ethnicity | HB | 6 | PCR‐sequencing | 226/79 |
| Wang YQ | 2014 | China | Asian | 583 | 1139 | 595 | 777 | 1325 | 482 | Sex, WHR, alcohol intake, ethnicity | HB | 6 | PCR‐ASP | 2317/2584 |
| Cao XL | 2016 | China | Asian | 117 | 272 | 176 | 152 | 255 | 134 | Age, sex, smoking, LDL‐C, ApoB, ethnicity | HB | 6 | PCR‐RFLP, direct sequencing | 565/541 |
| Matsuoka R | 2015 | Japan | Asian | 448 | 898 | 476 | 651 | 1132 | 501 | SBP, ethnicity | PB | 6 | Luminex bead‐based multiplex assay | 1822/2284 |
| Beigi SSH | 2015 | Iran | Asian | 22 | 44 | 34 | 17 | 44 | 32 | Age, sex, Height, Weight, BMI, TC,TG,FBS, HDL,LDL,SBP, DBP, ethnicity | HB | 6 | TaqMan SNP genotyping assay | 100/93 |
| Tang OS | 2017 | China | Asian | 37 | 136 | 116 | 38 | 134 | 166 | Age, sex, DBP, ethnicity | HB | 6 | real‐time PCR | 289/338 |
| Lee IT | 2014 | China | Asian | 198 | 479 | 248 | 181 | 318 | 135 | BMI, HDL,SBP, DBP, ethnicity | HB | 6 | StepOnePlus Real‐Time PCR | 925/634 |
| Qi L | 2012 | China | Asian | 35 | 64 | 43 | 46 | 94 | 52 | Ethnicity | HB | 6 | PCR‐RFLP | 142/192 |
| Xu JJ | 2018 | China | Asian | 202 | 253 | 429 | 287 | 182 | 438 | Age, Bleeding, TC, RBC, ethnicity | HB | 6 | iMLDR | 884/907 |
| Temel SG | 2019 | Turkey | Caucasian | 24 | 33 | 14 | 39 | 76 | 38 | Age, sex, Glucose, TC, ethnicity | HB | 6 | PCR‐RFLP | 71/153 |
Abbreviations: CDKN2A/2B: Cyclin‐dependent kinase inhibitor 2A/2B; NOS score: Newcastle‐Ottawa scale scores; PCR‐RFLP: Polymerase chain reaction‐restriction fragment length polymorphism; PCR‐ASP: Polymerase chain reaction‐allelic‐specific primer; iMLDR: improved multiplex ligase detection reaction; TC: total cholesterol; TG: triglyceride; LDL‐C: low‐density lipoprotein cholesterol; Apo B: apolipoproteins B; Bun: blood urea nitrogen; BMI: body mass index; WHR: waist hip rate; SBP: systolic blood pressure; DBP: diastolic blood pressure; RBC: red blood cell.
Summary of meta‐analysis of association between CDKN2B‐AS1 gene rs4977574 A/G polymorphism and CHD
| Genetic model | Pooled OR (95% CI) | Literature number | CHD size | control size | |||
|---|---|---|---|---|---|---|---|
| Allelic genetic model | 1.18 (1.08–1.29) | 3.49 | 4.83×10–4* | 17 | 18430 | 22549 | <0.00001 (88%)* |
| Caucasian subgroup | 1.18 (0.96–1.46) | 1.55 | 0.12 | 4 | 7392 | 12030 | <0.00001 (95%)* |
| Asian subgroup | 1.20 (1.13–1.27) | 5.78 | 7.47×10−9* | 13 | 11038 | 10519 | 0.03(47%)* |
| Recessive genetic model | 1.36 (1.11–1.67) | 2.99 | 0.003* | 17 | 18430 | 22549 | <0.00001 (92%)* |
| Caucasian subgroup | 1.40 (0.93–2.11) | 1.60 | 0.11 | 4 | 7392 | 12030 | <0.00001(96%)* |
| Asian subgroup | 1.40 (1.16–1.70) | 3.46 | 5.40×10−4* | 13 | 11038 | 10519 | <0.00001(81%)* |
| Dominant genetic model | 0.71 (0.58–0.86) | 3.42 | 6.26×10−4* | 17 | 18430 | 22549 | <0.00001 (93%)* |
| Caucasian subgroup | 0.70 (0.45–1.11) | 1.51 | 0.13 | 4 | 7392 | 12030 | <0.00001 (97%)* |
| Asian subgroup | 0.67 (0.59–0.77) | 5.62 | 1.91×10−8* | 13 | 11038 | 10519 | 0.0002(68%)* |
| Heterozygous genetic model | 1.210 (1.076–1.360) | 3.19 | 0.001* | 17 | 18430 | 22549 | <0.00001 (76.6%)* |
| Caucasian subgroup | 1.175 (0.928–1.489) | 1.34 | 0.181 | 4 | 7392 | 12030 | <0.00001 (87.4%)* |
| Asian subgroup | 1.247 (1.109–1.401) | 3.70 | 2.16×10−4* | 13 | 11038 | 10519 | 0.011(53.9%)* |
| Homozygous genetic model | 1.394 (1.163–1.671) | 3.59 | 3.31×10−4* | 17 | 18430 | 22549 | <0.00001 (87.9%)* |
| Caucasian subgroup | 1.393 (0.913–2.124) | 1.54 | 0.124 | 4 | 7392 | 12030 | <0.00001 (94.9%)* |
| Asian subgroup | 1.451 (1.304–1.613) | 6.86 | 6.89×10−12* | 13 | 11038 | 10519 | 0.112(33.7%) |
| Additive genetic model | 1.180 (1.075–1.295) | 3.49 | 4.83×10−4* | 17 | 18430 | 22549 | <0.00001 (88.4%)* |
| Caucasian subgroup | 1.182 (0.956–1.461) | 1.55 | 0.122 | 4 | 7392 | 12030 | <0.00001 (95.0%)* |
| Asian subgroup | 1.199 (1.127–1.274) | 5.78 | 7.47×10−9* | 13 | 11038 | 10519 | 0.03 (47.3%)* |
Abbreviations: CHD: coronary heart disease; CI: confidence interval; OR: odds ratio; CHD size: the total number of CHD cases; control size: the total number of control group; Allelic genetic model: G allele distribution frequency; Dominant genetic model: AAvs.AG + GG; Recessive:GGvs.AA + AG; Heterozygous genetic model: AG vs. AA; Homozygous genetic model: GG vs. AA; Additive genetic model: total G allele vs. total A.
*p ≤ 0.05.
FIGURE 1Forest plot of CHD associated with CDKN2B‐AS1 gene rs4977574 A/G polymorphism under an allelic genetic model (distribution of G allele frequency ofCDKN2B‐AS1 gene rs4977574 A/G polymorphism)
FIGURE 2Forest plot of CHD associated with CDKN2B‐AS1 gene rs4977574 A/G polymorphism under a recessive genetic model (GG vs. AG + AA)
FIGURE 3Forest plot of CHD associated with CDKN2B‐AS1 gene rs4977574 A/G polymorphism under a dominant genetic model (AA vs. AG + GG)
FIGURE 4Forest plot of CHD associated with CDKN2B‐AS1 gene rs4977574 A/G polymorphism under a heterozygous genetic model (AG vs. AA)
FIGURE 5Forest plot of CHD associated with CDKN2B‐AS1 gene rs4977574 A/G polymorphism under a homozygous genetic model (GG vs. AA)
FIGURE 6Forest plot of CHD associated with CDKN2B‐AS1 gene rs4977574 A/G polymorphism under an additive genetic model (total G allele vs. total A)
FIGURE 7The funnel plot for studies of the association of CHDandCDKN2B‐AS1 gene rs4977574 A/G polymorphism under an allelic genetic model (distribution of G allele frequency of CDKN2B‐AS1 gene rs4977574 A/G polymorphism). The horizontal and vertical axis correspond to the OR and SE (log[OR]). OR: odds ratio; SE: standard error
FIGURE 8The Begg's funnel plot for studies of the association of CHD and CDKN2B‐AS1 gene rs4977574 A/G polymorphism under an additive genetic model (total G allele vs. total A). The vertical and horizontal axis correspond to the OR and SE of OR. OR: odds ratio; SE: standard error
FIGURE 9The sensitivity analysis on the association of CHD and CDKN2B‐AS1 gene rs4977574 A/G polymorphism under an additive genetic model (total G allele vs. total A)