Literature DB >> 34410455

Microbial Community Structure and Diversity in Drinking Water Supply, Distribution Systems as well as Household Point of Use Sites in Addis Ababa City, Ethiopia.

Bayable Atnafu1, Adey Desta2, Fasil Assefa2.   

Abstract

Understanding ecology of microbiomes in drinking water distribution systems is the most important notion in delivering safe drinking water. Drinking water distribution systems harbor various microbiota despite efforts made in improving water infrastructures in the water industry, especially, in developing countries. Intermittent water supply, long time of water storage, low water pressure, and contaminated source water are among many of the factors responsible for poor drinking water quality affecting health of people. The aim of this study was to explore microbial diversity and structure in water samples collected from source water, treated water, reservoirs, and household points of use locations (taps). High-throughput Illumina sequencing technology was employed by targeting the V4 region of the 16S rRNA gene and the V1-V3 region of the 18S rRNA gene to analyze the microbial community structure. Proteobacteria followed by Firmicutes, Bacteroidetes, and Actinobacteria were the core dominating taxa. Gammaproteobacteria was also dominant among other proteobacterial classes across all sampling points. Opportunistic bacterial genera such as Pseudomonas, Legionella, Klebsiella, Escherichia, and Actinobacteria, as well as eukaryotic microbes like Cryptosporidium, Hartmannella, Acanthamoeba, Aspergillus, and Candida were also abundant taxa found along the distribution systems. The shift in microbial community structure from source to point of use locations was influenced by basic factors such as residual chlorine, intermittent water supply, and long-time storage at the household. The complex microbiota detected in different sampling sites in this study brings drinking water quality problem which further causes significant health problems to both human and animal health. Treatment ineffectiveness, disinfection inefficiency, poor maintenance actions, leakage of sewage, and other domestic wastes are few among many other factors responsible for degraded drinking water quality in this study putting health at high risk. Findings of this research provide important and baseline information to understand the microbial profiles of drinking water along source water and distribution systems. Moreover, knowing the microbial profile will help to design proper water quality assurance approaches.
© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Disinfection; Illumina sequencing; Microbiota; Opportunistic genera; Taxa; Water supply systems

Mesh:

Substances:

Year:  2021        PMID: 34410455     DOI: 10.1007/s00248-021-01819-3

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  38 in total

1.  Diversity and dynamics of microbial communities at each step of treatment plant for potable water generation.

Authors:  Wenfang Lin; Zhisheng Yu; Hongxun Zhang; Ian P Thompson
Journal:  Water Res       Date:  2013-11-07       Impact factor: 11.236

2.  Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities.

Authors:  Patrick D Schloss; Sarah L Westcott; Thomas Ryabin; Justine R Hall; Martin Hartmann; Emily B Hollister; Ryan A Lesniewski; Brian B Oakley; Donovan H Parks; Courtney J Robinson; Jason W Sahl; Blaz Stres; Gerhard G Thallinger; David J Van Horn; Carolyn F Weber
Journal:  Appl Environ Microbiol       Date:  2009-10-02       Impact factor: 4.792

3.  Bacterial composition in a metropolitan drinking water distribution system utilizing different source waters.

Authors:  Vicente Gomez-Alvarez; Ben W Humrighouse; Randy P Revetta; Jorge W Santo Domingo
Journal:  J Water Health       Date:  2015-03       Impact factor: 1.744

4.  Changes in bacterial composition of biofilm in a metropolitan drinking water distribution system.

Authors:  R P Revetta; V Gomez-Alvarez; T L Gerke; J W Santo Domingo; N J Ashbolt
Journal:  J Appl Microbiol       Date:  2016-07       Impact factor: 3.772

5.  Analysis of the bacterial communities associated with different drinking water treatment processes.

Authors:  Dan-Ning Zeng; Zhen-Yu Fan; Liang Chi; Xia Wang; Wei-Dong Qu; Zhe-Xue Quan
Journal:  World J Microbiol Biotechnol       Date:  2013-03-21       Impact factor: 3.312

6.  VSEARCH: a versatile open source tool for metagenomics.

Authors:  Torbjørn Rognes; Tomáš Flouri; Ben Nichols; Christopher Quince; Frédéric Mahé
Journal:  PeerJ       Date:  2016-10-18       Impact factor: 2.984

7.  Characterization, Microbial Community Structure, and Pathogen Occurrence in Urban Faucet Biofilms in South China.

Authors:  Huirong Lin; Shuting Zhang; Song Gong; Shenghua Zhang; Xin Yu
Journal:  Biomed Res Int       Date:  2015-07-26       Impact factor: 3.411

8.  A RESTful API for accessing microbial community data for MG-RAST.

Authors:  Andreas Wilke; Jared Bischof; Travis Harrison; Tom Brettin; Mark D'Souza; Wolfgang Gerlach; Hunter Matthews; Tobias Paczian; Jared Wilkening; Elizabeth M Glass; Narayan Desai; Folker Meyer
Journal:  PLoS Comput Biol       Date:  2015-01-08       Impact factor: 4.475

Review 9.  Next-generation sequencing (NGS) for assessment of microbial water quality: current progress, challenges, and future opportunities.

Authors:  BoonFei Tan; Charmaine Ng; Jean Pierre Nshimyimana; Lay Leng Loh; Karina Y-H Gin; Janelle R Thompson
Journal:  Front Microbiol       Date:  2015-09-25       Impact factor: 5.640

10.  Piped water supply interruptions and acute diarrhea among under-five children in Addis Ababa slums, Ethiopia: A matched case-control study.

Authors:  Metadel Adane; Bezatu Mengistie; Girmay Medhin; Helmut Kloos; Worku Mulat
Journal:  PLoS One       Date:  2017-07-19       Impact factor: 3.240

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  2 in total

Review 1.  Clean and Safe Drinking Water Systems via Metagenomics Data and Artificial Intelligence: State-of-the-Art and Future Perspective.

Authors:  Asala Mahajna; Inez J T Dinkla; Gert Jan W Euverink; Karel J Keesman; Bayu Jayawardhana
Journal:  Front Microbiol       Date:  2022-05-05       Impact factor: 6.064

Review 2.  Detection of Cryptosporidium spp. and Giardia spp. in Environmental Water Samples: A Journey into the Past and New Perspectives.

Authors:  Marie-Stéphanie Fradette; Alexander I Culley; Steve J Charette
Journal:  Microorganisms       Date:  2022-06-07
  2 in total

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