| Literature DB >> 34393583 |
Jingyi Zhang1,2,3, Rungtiwa Phookamsak4,5,6,7, Ausana Mapook2, Yongzhong Lu1, Menglan Lv1.
Abstract
BACKGROUND: During taxonomic and phylogenetic studies of fungi on pteridophytes in Thailand, Monilochaetes pteridophytophila sp. nov. was collected from the frond stalks of a tree fern (Alsophila costularis, Cyatheaceae). The new species is introduced, based on evidence from morphology and phylogenetic analyses of a concatenated dataset of LSU, ITS, SSU and RPB2 sequences. NEW INFORMATION: Monilochaetes pteridophytophila differs from extant species of Monilochaetes in having darker conidiophores with fewer septae (1-4-septate). Monilochaetes pteridophytophila forms a distinct clade, basal from other species of Monilochaetes in Australiascaceae. A detailed description and illustrations of the new species are provided. We also provided a synopsis of accepted species of Monilochaetes. Jingyi Zhang, Rungtiwa Phookamsak, Ausana Mapook, Yongzhong Lu, Menglan Lv.Entities:
Keywords: Hyphomycetes ; Sordariomycetes ; Pteridophytes; one new taxon; taxonomy
Year: 2021 PMID: 34393583 PMCID: PMC8346447 DOI: 10.3897/BDJ.9.e67248
Source DB: PubMed Journal: Biodivers Data J ISSN: 1314-2828
Primers and PCR amplification condition.
|
|
|
|
|
| Large subunit ribosomal RNA (LSU) | LR0R/LR5 | 1. 95°C – 3 min | |
| 2. 94°C – 30 sec | |||
| 3. 51°C – 50 sec | |||
| 4. 72°C – 1 min | |||
| 5. Repeat 2–4 for 30 cycles | |||
| 6. 72°C – 7 min | |||
| 7. 4°C on hold | |||
| Internal transcribed spacer region of ribosomal DNA (ITS) | ITS1/ITS4 | 1. 95°C – 3 min | |
| 2. 95°C – 30 sec | |||
| 3. 51°C – 1 min | |||
| 4. 72°C – 45 sec | |||
| 5. Repeat 2–4 for 34 cycles | |||
| 6. 72°C – 10 min | |||
| 7. 4°C on hold | |||
| Small subunit ribosomal RNA (SSU) | NS1/NS4 | 1. 94°C – 3 min |
|
| 2. 94°C – 45 sec | |||
| 3. 56°C – 50 sec | |||
| 4. 72°C – 1 min | |||
| 5. Repeat 2–4 for 40 cycles | |||
| 6. 72°C – 10 min | |||
| 7. 4°C on hold | |||
| RNA polymerase II second largest subunit (RPB2) | fRPB2-5f/fRPB2-7cR | 1. 95°C – 5 min |
|
| 2. 95°C – 1 min | |||
| 3. 55°C – 2 min | |||
| 4. 72°C – 90 sec | |||
| 5. Repeat 2 – 4 for 40 cycles | |||
| 6. 72°C – 10 min | |||
| 7. 4°C on hold |
Taxa used to infer the phylogenetic tree and their GenBank accession numbers.
Notes: "-" as meaning no data available in GenBank. The newly-generated sequences are underlined. The ex-type strains are in bold.
|
|
|
| |||
|
|
|
|
| ||
|
| strain V205 |
|
|
|
|
|
| strain V206 |
|
|
|
|
|
| CBS 586.83 |
|
| - |
|
|
| BBA 67875 |
|
|
| - |
|
|
|
|
|
| - |
|
| CBS 79672 | - |
| - | - |
|
| MCA 2498 |
|
| - | - |
|
| MFLU 19–2898 |
|
|
|
|
|
| BBA 70523 |
|
|
| - |
|
|
|
|
| - |
|
|
|
|
|
|
| - |
|
| DLUCC 0575 |
|
| - |
|
|
| DLUCC 0614 |
|
| - |
|
|
| CBS 570.76 |
|
| - | - |
|
| CBS 561.77 |
| - | - | - |
|
|
| - |
|
| - |
|
|
|
|
| - |
|
|
| DAOM 226890 |
|
|
|
|
|
|
|
|
| - |
|
|
| CBS 838.91 |
|
|
|
|
|
| CBS 421.95 |
|
| - | - |
|
|
|
|
| - |
|
|
| JW231013 |
|
| - |
|
|
|
|
|
| - | - |
|
|
|
|
| - |
|
|
|
|
|
| - | - |
|
| MFLUCC 16–0256 |
|
|
| - |
|
| BRIP 24607 |
|
| - | - |
|
| BRIP 24334c |
|
| - | - |
|
|
|
|
|
| - |
|
|
|
|
| - | - |
|
| CBS 379.77 | - |
|
|
|
|
|
| - |
|
| - |
|
| CBS 869.96 |
|
|
|
|
|
|
|
|
| - | - |
|
| DAOM 226788 |
|
|
| - |
|
|
|
|
| - | - |
|
|
|
|
| - | - |
|
|
|
|
|
|
|
Figure 1.(MFLU 21-0023, holotype). a. The host tree fern () in the field; b. Dead frond stalks of tree fern; c. Colony on dead frond stalk of tree fern; d. Conidiophore; e–g. Conidiogenous cells with attached conidia; h. Germinating conidium; i–n. Conidia; o. Colony on PDA from above and below. Scale bars: c = 200 μm, d = 100 μm, e–h = 20 μm, i–n = 10 μm.
Figure 2.Phylogenetic tree generated from ML analysis, based on a concatenated LSU–ITS–SSU–RPB2 dataset. BS ≥ 70/PP ≥ 0.95 are indicated at the nodes. The newly-generated strain is shown in red and bold. Ex-type strains are indicated by black and bold. (CBS 586.83), (CBS 137294) and (CBS 128196) were used as outgroup taxa.
Synopsis of asexual morph of accepted species in with morphological features.
|
|
|
|
|
|
|
|
| Palm petiole | Peru | 200–300(–600) × 5–7 / - | 9–25 × 3.5–6(–7) / - |
|
|
| Branch of | Australia | 200–720 × 9–10(–10.5) / 40–60 × 2–2.5 | 20.5–24(–26.5) × (10–)11–12 / 4–5.5 × 3–3.5 | |
|
| Decayed wood | Cuba | 230–450 × 6.5–7 / 40 × 3 | 21–25(–27) × 6.5–7 / |
|
|
| Decaying leaf of | Solomon Islands | 150–220(–400) × 4–7 / - | 18–21 × 6–9 /- |
|
|
| Asia, Australia, Europe, New Zealand, South Africa, Pacific Islands, USA | 60–400 / - | 15–20 × 4–6 / - | ||
|
| Leaf litter, dead stipes and spathes of a tree fern, rotting frond stems of | Australia, British Isles, Cuba, Ethiopia, India, Malaysia, Papua New Guinea, Sabah and Sri Lanka. | 40–160(–280) × 7–8 / - | (15.5–)18–22.5(–23.5) × 7.5–9(–10) / - | |
|
| Leaf spots of | Malaysia | 90 – 250 × 6 –10 /- | (17–)18–19(–20) × (7.5–)8 / - |
|
|
| Healthy leaf of | China | 300–640 × 7.5–13 / | 16.5–24 × 9.5–15.5 / |
|
|
|
|
|
| ||
|
| Dead twigs of | India | 300 × 8–10 / - | 25–38 × 12–16 / - |
|