| Literature DB >> 34355541 |
Chenghao Yang1,2, Ilja M Nolte3, Yanyan Ma1, Xuguang An1, Fokko J Bosker2,4, Jie Li1.
Abstract
BACKGROUND: Understanding how genetic polymorphisms are associated with the pathophysiology of major depressive disorder (MDD) may aid in diagnosis and the development of personalized treatment strategies. CNR1 is the gene coding Cannabinoid type 1 receptor which is highly involved in emotional processing and in regulating neurotransmitter releases. We aimed to investigate the associations of CNR1 single-nucleotide polymorphisms (SNPs) with MDD susceptibility and treatment response.Entities:
Keywords: zzm321990CNR1zzm321990; antidepressant treatment resistance; cannabinoid receptor; major depressive disorder; single-nucleotide polymorphism
Mesh:
Substances:
Year: 2021 PMID: 34355541 PMCID: PMC8457701 DOI: 10.1002/mgg3.1752
Source DB: PubMed Journal: Mol Genet Genomic Med ISSN: 2324-9269 Impact factor: 2.183
Sociodemographic and clinical characteristics of patients
| Characteristic | Number | Mean age (SD) | Sex (male, %) | Chi‐square (sex) | ||
|---|---|---|---|---|---|---|
| Age | Sex | |||||
| TRDI group | 81 | 46.0 (12.7) | 47 (58.0) | 23.798 | .062 | <.001 |
| MDNTR group | 100 | 42.8 (10.2) | 24 (24.0) | .003 | ||
| HC | 80 | 40.5 (11.6) | 25 (31.3) | .183 | ||
Abbreviations: HC, healthy control; MDNTR, major depressive patient with no treatment resistance; SD, standard deviation; TRDI, treatment‐resistant depression with increased inflammatory activity.
Compared between TRDI and MDNTR.
Compared between TRDI and HC.
Compared between MDNTR and HC; chi‐square and p value for sex are compared among three groups.
Associations of CNR1 alleles and genotypes between MDD cases and controls
| SNP | Genotypes | Genotype (subject size) | Allele frequency (%) | Chi‐square | OR (95%CI) | |||
|---|---|---|---|---|---|---|---|---|
| Cases (n = 181) | HC (n = 80) | Cases | HC | |||||
| rs806366 | CC/CT/TT | 28/86/67 | 10/36/34 | C 39.4 | 34.9 | 0.91 | 1.21 (0.82, 1.80) | .37/.22 |
| rs806367 | TT/TC/CC | 3/41/137 | 0/5/75 | T 12.9 | 3.2 | 11.52 | 4.52 (1.76, 11.61) | . |
| rs806368 | TT/TC/CC | 41/90/50 | 17/40/23 | T 47.8 | 45.6 | 0.20 | 1.09 (0.75, 1.58) | .70/.45 |
| rs806370 | CC/CT/TT | 39/90/52 | 16/39/25 | C 46.3 | 44.1 | 0.21 | 1.09 (0.75, 1.60) | .52/.48 |
| rs806380 | GG/GA/AA | 5/49/127 | 1/19/60 | G 16.2 | 13.6 | 0.10 | 0.96 (0.60, 1.53) | .77/.66 |
| rs6454674 | GG/GT/TT | 19/80/82 | 3/26/51 | G 32.8 | 20.4 | 7.90 | 1.90 (1.21, 2.99) | .0054/.0068 |
| rs2180619 | GG/GA/AA | 9/61/111 | 2/20/58 | G 21.6 | 15.0 | 3.08 | 1.56 (0.95, 2.58) | .093/.059 |
CNR1 GenBank version number: NC_000006.11. All significances are shown in bold.
Abbreviations: CI, confidence interval; HC, healthy controls; MDD, major depressive disorder; MDNTR, major depressive patient with no treatment resistance; OR, odds ratio; p‐adjusted, the p value after adjusting for sex and age; SNP, single‐nucleotide polymorphism; TRDI, treatment‐resistant depression with increased inflammatory activity.
Associations of CNR1 alleles and genotypes between TRDI and MDNTR patients in relation to treatment response
| SNP | Genotypes | Genotype (subject size) | Allele frequency (%) | Chi‐square | OR (95% CI) | |||
|---|---|---|---|---|---|---|---|---|
| TRDI (n = 81) | MDNTR (n = 100) | TRDI | MDNTR | |||||
| rs806366 | CC/CT/TT | 10/37/34 | 19/49/32 | C 34.6 | 43.2 | 2.68 | 0.70 (0.45, 1.08) | .12/.22 |
| rs806367 | TT/TC/CC | 3/27/51 | 0/13/87 | T 20.5 | 6.7 | 14.7 | 3.59 (1.81, 7.12) | . |
| rs806368 | TT/TC/CC | 17/40/24 | 24/50/26 | T 46.2 | 49.0 | 0.29 | 0.89 (0.59, 1.36) | .67/.83 |
| rs806370 | CC/CT/TT | 15/40/26 | 23/50/27 | C 43.6 | 48.5 | 0.82 | 0.82 (0.54, 1.26) | .39/.70 |
| rs806380 | GG/GA/AA | 2/23/562/26/71 | G 17.115.5 | 1.02 | 1.22 (0.90, 1.54) | .45/.49 | ||
| rs6454674 | GG/GT/TT | 11/38/32 | 9/42/49 | G 36.7 | 29.6 | 2.01 | 1.38 (0.88, 2.16) | .17/.41 |
| rs2180619 | GG/GA/AA | 3/27/51 | 5/35/60 | G 20.5 | 22.5 | 0.20 | 0.89 (0.53, 1.48) | .70/.87 |
CNR1 GenBank version number: NC_000006.11. All significances are shown in bold.
Abbreviations: CI, confidence interval; MDNTR, major depressive patient with no treatment resistance; OR, odds ratio; p‐adjusted, the p value after adjusting for sex and age; SNP, single‐nucleotide polymorphism; TRDI, treatment‐resistant depression with increased inflammatory activity.
Associations of CNR1 haplotypes between MDD cases and healthy controls
| Haplotype combination | HC | Cases | MDNTR | TRDI | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Frequency % | Frequency % | OR | Frequency % | OR | Frequency % | OR | ||||
| C‐C | 1.30 | 1.20 | 0.93 | .95 | 1.60 | 1.21 | .88 | 0.70 | 0.55 | .71 |
| C‐T | 53.1 | 51.0 | 0.92 | .76 | 49.4 | 0.86 | .63 | 52.9 | 0.99 | .98 |
| T‐C | 43.5 | 45.4 | 1.08 | .78 | 46.9 | 1.14 | .66 | 43.6 | 1.00 | 1.00 |
| T‐T | 2.10 | 2.40 | 1.14 | .89 | 2.10 | 1.02 | .99 | 2.80 | 1.38 | .74 |
| Other | 0.02 | 0.02 | 1.03 | 1.00 | 0.01 | 0.80 | .98 | 0.04 | 2.30 | .93 |
| C‐C‐T‐C | 31.7 | 26.4 | 0.77 | .38 | 35.7 | 1.18 | .60 | 15.0 | 0.38 | . |
| C‐T‐T‐C | 3.30 | 12.6 | 4.27 | . | 6.80 | 2.20 | .29 | 19.5 | 6.94 | . |
| T‐C‐C‐C | 1.20 | 1.00 | 0.85 | .90 | 1.50 | 1.16 | .91 | 0.70 | 0.56 | .71 |
| T‐C‐C‐T | 52.9 | 50.1 | 0.89 | .67 | 48.4 | 0.83 | .54 | 51.7 | 0.95 | .87 |
| T‐C‐T‐C | 8.60 | 6.20 | 0.70 | .48 | 4.50 | 0.51 | .29 | 8.20 | 0.93 | .89 |
| T‐C‐T‐T | 1.90 | 2.10 | 1.11 | .92 | 2.00 | 0.99 | .99 | 2.80 | 1.37 | .75 |
| Other | 0.38 | 1.61 | 4.32 | .45 | 1.11 | 0.60 | .60 | 2.10 | 5.64 | .38 |
| A‐G | 10.1 | 18.8 | 2.05 | .08 | 16.1 | 1.76 | .22 | 22.3 | 2.53 | . |
| A‐T | 76.6 | 64.8 | 0.56 | .06 | 68.2 | 0.64 | .20 | 60.5 | 0.47 | . |
| G‐G | 10.6 | 13.7 | 1.34 | .49 | 13.3 | 1.27 | .60 | 14.0 | 1.37 | .49 |
| G‐T | 2.70 | 2.70 | 1.01 | .99 | 2.50 | 0.97 | .98 | 3.20 | 1.23 | .81 |
| Other | 0.01 | 0.01 | 0.46 | .96 | 0.00 | 0.41 | .96 | 0.02 | 1.98 | .96 |
CNR1 GenBank version number: NC_000006.11. All significances are shown in bold.
Abbreviations: HC, healthy control; MDNTR, major depressive patient with no treatment resistance; OR, odds ratio; OR/p value, compared to the healthy control, respectively; TRDI, treatment‐resistant depression with increased inflammatory activity.
Haplotype block of two loci with strong LD (r 2 > 0.8): rs806368–rs806370.
Haplotype block of four loci that were in at least moderate LD (r 2 > 0.1): rs806366–rs806367–rs806368–rs806370.
Haplotype block of two loci that were in moderate LD (r 2 > 0.1): rs806380–rs6454674.
Associations of CNR1 haplotypes between TRDI and MDNTR patients in relation to treatment response
| Haplotype combination | MDNTR frequency % | TRDI frequency % | OR | |
|---|---|---|---|---|
| C‐C | 1.60 | 0.70 | 0.44 | .61 |
| C‐T | 49.4 | 52.9 | 1.15 | .64 |
| T‐C | 46.9 | 43.6 | 0.88 | .66 |
| T‐T | 2.10 | 2.80 | 1.28 | .80 |
| Other | 0.01 | 0.04 | 2.89 | .91 |
| C‐C‐T‐C | 35.7 | 15.0 | 0.33 | . |
| C‐T‐T‐C | 6.80 | 19.5 | 3.11 | . |
| T‐C‐C‐C | 1.50 | 0.70 | 0.20 | .49 |
| T‐C‐C‐T | 48.4 | 51.7 | 1.14 | .65 |
| T‐C‐T‐C | 4.50 | 8.20 | 1.88 | .32 |
| T‐C‐T‐T | 2.00 | 2.80 | 1.62 | .64 |
| Other | 1.11 | 2.10 | 1.91 | .60 |
| A‐G | 16.1 | 22.3 | 1.48 | .30 |
| A‐T | 68.2 | 60.5 | 0.71 | .28 |
| G‐G | 13.3 | 14.0 | 1.06 | .89 |
| G‐T | 2.50 | 3.20 | 1.36 | .72 |
| Other | 0.00 | 0.02 | 4.88 | .92 |
CNR1 GenBank version number: NC_000006.11. The significance was in bold.
Abbreviations: HC, healthy control; MDNTR, major depressive patient with no treatment resistance; OR, odds ratio; TRDI, treatment‐resistant depression with increased inflammatory activity.
Haplotype block of two loci with strong LD (r 2 > 0.8): rs806368–rs806370.
Haplotype block of four loci that were in at least moderate LD (r 2 > 0.1): rs806366–rs806367–rs806368–rs806370.
Haplotype block of two loci that were in moderate LD (r 2 > 0.1): rs806380–rs6454674.