Literature DB >> 34341580

High-speed laser-scanning biological microscopy using FACED.

Queenie T K Lai1, Gwinky G K Yip1, Jianglai Wu2,3, Justin S J Wong1, Michelle C K Lo1, Kelvin C M Lee1, Tony T H D Le1, Hayden K H So1, Na Ji4,5,6,7, Kevin K Tsia8,9.   

Abstract

Laser scanning is used in advanced biological microscopy to deliver superior imaging contrast, resolution and sensitivity. However, it is challenging to scale up the scanning speed required for interrogating a large and heterogeneous population of biological specimens or capturing highly dynamic biological processes at high spatiotemporal resolution. Bypassing the speed limitation of traditional mechanical methods, free-space angular-chirp-enhanced delay (FACED) is an all-optical, passive and reconfigurable laser-scanning approach that has been successfully applied in different microscopy modalities at an ultrafast line-scan rate of 1-80 MHz. Optimal FACED imaging performance requires optimized experimental design and implementation to enable specific high-speed applications. In this protocol, we aim to disseminate information allowing FACED to be applied to a broader range of imaging modalities. We provide (i) a comprehensive guide and design specifications for the FACED hardware; (ii) step-by-step optical implementations of the FACED module including the key custom components; and (iii) the overall image acquisition and reconstruction pipeline. We illustrate two practical imaging configurations: multimodal FACED imaging flow cytometry (bright-field, fluorescence and second-harmonic generation) and kHz 2D two-photon fluorescence microscopy. Users with basic experience in optical microscope operation and software engineering should be able to complete the setup of the FACED imaging hardware and software in ~2-3 months.
© 2021. The Author(s), under exclusive licence to Springer Nature Limited.

Year:  2021        PMID: 34341580     DOI: 10.1038/s41596-021-00576-4

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  35 in total

Review 1.  High-Throughput Imaging for the Discovery of Cellular Mechanisms of Disease.

Authors:  Gianluca Pegoraro; Tom Misteli
Journal:  Trends Genet       Date:  2017-07-18       Impact factor: 11.639

2.  Time-stretch microscopy on a DVD for high-throughput imaging cell-based assay.

Authors:  Anson H L Tang; P Yeung; Godfrey C F Chan; Barbara P Chan; Kenneth K Y Wong; Kevin K Tsia
Journal:  Biomed Opt Express       Date:  2017-01-06       Impact factor: 3.732

3.  Multi-MHz laser-scanning single-cell fluorescence microscopy by spatiotemporally encoded virtual source array.

Authors:  Jianglai Wu; Anson H L Tang; Aaron T Y Mok; Wenwei Yan; Godfrey C F Chan; Kenneth K Y Wong; Kevin K Tsia
Journal:  Biomed Opt Express       Date:  2017-08-21       Impact factor: 3.732

4.  High-speed recording of neural spikes in awake mice and flies with a fluorescent voltage sensor.

Authors:  Yiyang Gong; Cheng Huang; Jin Zhong Li; Benjamin F Grewe; Yanping Zhang; Stephan Eismann; Mark J Schnitzer
Journal:  Science       Date:  2015-11-19       Impact factor: 47.728

5.  Deep Cytometry: Deep learning with Real-time Inference in Cell Sorting and Flow Cytometry.

Authors:  Yueqin Li; Ata Mahjoubfar; Claire Lifan Chen; Kayvan Reza Niazi; Li Pei; Bahram Jalali
Journal:  Sci Rep       Date:  2019-07-31       Impact factor: 4.379

6.  Parallelized volumetric fluorescence microscopy with a reconfigurable coded incoherent light-sheet array.

Authors:  Yu-Xuan Ren; Jianglai Wu; Queenie T K Lai; Hei Ming Lai; Dickson M D Siu; Wutian Wu; Kenneth K Y Wong; Kevin K Tsia
Journal:  Light Sci Appl       Date:  2020-01-20       Impact factor: 17.782

7.  Ultrafast Two-Photon Imaging of a High-Gain Voltage Indicator in Awake Behaving Mice.

Authors:  Vincent Villette; Mariya Chavarha; Ivan K Dimov; Jonathan Bradley; Lagnajeet Pradhan; Benjamin Mathieu; Stephen W Evans; Simon Chamberland; Dongqing Shi; Renzhi Yang; Benjamin B Kim; Annick Ayon; Abdelali Jalil; François St-Pierre; Mark J Schnitzer; Guoqiang Bi; Katalin Toth; Jun Ding; Stéphane Dieudonné; Michael Z Lin
Journal:  Cell       Date:  2019-12-12       Impact factor: 41.582

8.  The Human Cell Atlas.

Authors:  Aviv Regev; Sarah A Teichmann; Eric S Lander; Ido Amit; Christophe Benoist; Ewan Birney; Bernd Bodenmiller; Peter Campbell; Piero Carninci; Menna Clatworthy; Hans Clevers; Bart Deplancke; Ian Dunham; James Eberwine; Roland Eils; Wolfgang Enard; Andrew Farmer; Lars Fugger; Berthold Göttgens; Nir Hacohen; Muzlifah Haniffa; Martin Hemberg; Seung Kim; Paul Klenerman; Arnold Kriegstein; Ed Lein; Sten Linnarsson; Emma Lundberg; Joakim Lundeberg; Partha Majumder; John C Marioni; Miriam Merad; Musa Mhlanga; Martijn Nawijn; Mihai Netea; Garry Nolan; Dana Pe'er; Anthony Phillipakis; Chris P Ponting; Stephen Quake; Wolf Reik; Orit Rozenblatt-Rosen; Joshua Sanes; Rahul Satija; Ton N Schumacher; Alex Shalek; Ehud Shapiro; Padmanee Sharma; Jay W Shin; Oliver Stegle; Michael Stratton; Michael J T Stubbington; Fabian J Theis; Matthias Uhlen; Alexander van Oudenaarden; Allon Wagner; Fiona Watt; Jonathan Weissman; Barbara Wold; Ramnik Xavier; Nir Yosef
Journal:  Elife       Date:  2017-12-05       Impact factor: 8.140

9.  Ultrafast laser-scanning time-stretch imaging at visible wavelengths.

Authors:  Jiang-Lai Wu; Yi-Qing Xu; Jing-Jiang Xu; Xiao-Ming Wei; Antony Cs Chan; Anson Hl Tang; Andy Ks Lau; Bob Mf Chung; Ho Cheung Shum; Edmund Y Lam; Kenneth Ky Wong; Kevin K Tsia
Journal:  Light Sci Appl       Date:  2017-01-27       Impact factor: 17.782

10.  Kilohertz two-photon fluorescence microscopy imaging of neural activity in vivo.

Authors:  Jianglai Wu; Yajie Liang; Shuo Chen; Ching-Lung Hsu; Mariya Chavarha; Stephen W Evans; Dongqing Shi; Michael Z Lin; Kevin K Tsia; Na Ji
Journal:  Nat Methods       Date:  2020-03-02       Impact factor: 47.990

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  1 in total

1.  Ultrafast two-photon fluorescence imaging of cerebral blood circulation in the mouse brain in vivo.

Authors:  Guanghan Meng; Jian Zhong; Qinrong Zhang; Justin S J Wong; Jianglai Wu; Kevin K Tsia; Na Ji
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-01       Impact factor: 12.779

  1 in total

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