Literature DB >> 34331277

Multiplexed Imaging of Posttranslational Modifications of Endogenous Proteins in Live Cells.

Yuko Sato1, Hiroshi Kimura2.   

Abstract

Posttranslational histone modifications are associated with the regulation of genome function. Some modifications are quite stable to maintain epigenome states of chromatin, and others can exhibit dynamic changes in response to internal and external stimuli. To track the local and global changes in histone modifications, multiplexed imaging in living cells is beneficial. Among live cell probes for detecting histone modifications, genetically encoded modification-specific intracellular antibodies, or mintbodies, are convenient and suitable tools for this purpose. We here describe the mintbody-based methods to monitor the changes in histone modification levels induced by histone methyltransferase and deacetylase inhibitors. By measuring the nuclear to cytoplasmic intensity ratios of mintbodies in living cells, changes in histone H4 lysine 20 methylation states and the increase in histone H3 acetylation were detected.
© 2021. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Histone modifications; Live-cell imaging; Modification-specific intracellular antibody

Year:  2021        PMID: 34331277     DOI: 10.1007/978-1-0716-1593-5_3

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  22 in total

Review 1.  Single-cell epigenomics: techniques and emerging applications.

Authors:  Omer Schwartzman; Amos Tanay
Journal:  Nat Rev Genet       Date:  2015-10-13       Impact factor: 53.242

Review 2.  Nucleosome structure and dynamics are coming of age.

Authors:  Keda Zhou; Guillaume Gaullier; Karolin Luger
Journal:  Nat Struct Mol Biol       Date:  2018-12-10       Impact factor: 15.369

Review 3.  Regulation of chromatin by histone modifications.

Authors:  Andrew J Bannister; Tony Kouzarides
Journal:  Cell Res       Date:  2011-02-15       Impact factor: 25.617

4.  A chromatin integration labelling method enables epigenomic profiling with lower input.

Authors:  Akihito Harada; Kazumitsu Maehara; Tetsuya Handa; Yasuhiro Arimura; Jumpei Nogami; Yoko Hayashi-Takanaka; Katsuhiko Shirahige; Hitoshi Kurumizaka; Hiroshi Kimura; Yasuyuki Ohkawa
Journal:  Nat Cell Biol       Date:  2018-12-10       Impact factor: 28.824

Review 5.  The exploitation of FRET probes to track bromodomain/histone interactions in cells for bromodomain inhibitors.

Authors:  Kazuki Sasaki; Minoru Yoshida
Journal:  Drug Discov Today Technol       Date:  2016-07-20

Review 6.  Histone modifications for human epigenome analysis.

Authors:  Hiroshi Kimura
Journal:  J Hum Genet       Date:  2013-06-06       Impact factor: 3.172

7.  Kinetics of core histones in living human cells: little exchange of H3 and H4 and some rapid exchange of H2B.

Authors:  H Kimura; P R Cook
Journal:  J Cell Biol       Date:  2001-06-25       Impact factor: 10.539

Review 8.  Visualizing posttranslational and epigenetic modifications of endogenous proteins in vivo.

Authors:  Hiroshi Kimura; Yoko Hayashi-Takanaka; Timothy J Stasevich; Yuko Sato
Journal:  Histochem Cell Biol       Date:  2015-07-03       Impact factor: 4.304

9.  Modular fluorescence complementation sensors for live cell detection of epigenetic signals at endogenous genomic sites.

Authors:  Cristiana Lungu; Sabine Pinter; Julian Broche; Philipp Rathert; Albert Jeltsch
Journal:  Nat Commun       Date:  2017-09-21       Impact factor: 14.919

10.  Modulation of nucleosomal DNA accessibility via charge-altering post-translational modifications in histone core.

Authors:  Andrew T Fenley; Ramu Anandakrishnan; Yared H Kidane; Alexey V Onufriev
Journal:  Epigenetics Chromatin       Date:  2018-03-16       Impact factor: 4.954

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  1 in total

1.  Live imaging of transcription sites using an elongating RNA polymerase II-specific probe.

Authors:  Satoshi Uchino; Yuma Ito; Yuko Sato; Tetsuya Handa; Yasuyuki Ohkawa; Makio Tokunaga; Hiroshi Kimura
Journal:  J Cell Biol       Date:  2021-12-02       Impact factor: 10.539

  1 in total

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