| Literature DB >> 34327235 |
Kaan Orhan1,2,3, Lukas Driesen1, Sohaib Shujaat1, Reinhilde Jacobs1, Xiangfei Chai4.
Abstract
The purpose of this study was to propose a machine learning model and assess its ability to classify TMJ pathologies on magnetic resonance (MR) images. This retrospective cohort study included 214 TMJs from 107 patients with TMJ signs and symptoms. A radiomics platform was used to extract (Huiying Medical Technology Co., Ltd., China) imaging features of TMJ pathologies, condylar bone changes, and disc displacements. Thereafter, different machine learning (ML) algorithms and logistic regression were implemented on radiomic features for feature selection, classification, and prediction. The following radiomic features included first-order statistics, shape, texture, gray-level cooccurrence matrix (GLCM), gray-level run length matrix (GLRLM), and gray-level size zone matrix (GLSZM). Six classifiers, including logistic regression (LR), random forest (RF), decision tree (DT), k-nearest neighbors (KNN), XGBoost, and support vector machine (SVM) were used for model building which could predict the TMJ pathologies. The performance of models was evaluated by sensitivity, specificity, and ROC curve. KNN and RF classifiers were found to be the most optimal machine learning model for the prediction of TMJ pathologies. The AUC, sensitivity, and specificity for the training set were 0.89 and 1, while those for the testing set were 0.77 and 0.74, respectively, for condylar changes and disc displacement, respectively. For TMJ condylar bone changes Large-Area High-Gray-Level Emphasis, Gray-Level Nonuniformity, Long-Run Emphasis Long-Run High-Gray-Level Emphasis, Flatness, and Volume features, while for TMJ disc displacements Average Intensity, Sum Average, Spherical Disproportion, and Entropy features, were selected. This study has proposed a machine learning model by KNN and RF analysis on TMJ MR images, which can be used to classify condylar changes and TMJ disc displacements.Entities:
Year: 2021 PMID: 34327235 PMCID: PMC8277497 DOI: 10.1155/2021/6656773
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
The classification of study group using DC/TMJ.
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Figure 1MRI images showing the tracings of TMJ disc and condyle in a radiomic platform.
The distribution of the disc positions.
| Disc positions | Number of TMJs | % |
|---|---|---|
| Normal | 46 | 21.5 |
| ∗ADDwR | 125 | 58.4 |
| ∗ADDwoR | 43 | 20.1 |
| Total | 214 | 100 |
∗ADDwR: anterior disc displacement with reduction. ∗ADDwoR: anterior disc displacement without reduction.
Figure 2MRI images demonstrating normal and anterior disc locations with and without reduction.
Figure 3MRI images demonstrating degenerative joint disease in series.
Radiomic features selected for quantifying the heterogeneity differences.
| Radiomic group | Associated filter | No. of features ( | Radiomic features |
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| First-order statistics | None | 18 | Energy, total energy, entropy, minimum, 10 percentile, 90 percentile, maximum, mean, median, interquartile range, range, mean absolute deviation, robust mean absolute deviation, root mean square, standard deviation, skewness, kurtosis, variance |
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| Shape | None | 8 | Volume, surface area, surface volume ratio, spherical disproportion, maximum 3D diameter, maximum 2D diameter column, maximum 2D diameter row, elongation |
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| Texture features | GLCM | 15 | Autocorrelation, average intensity, cluster prominence, cluster shade, cluster tendency, contrast, difference average, difference entropy, difference variance, dissimilarity, entropy, sum average, sum entropy, sum variance, sum squares |
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| Texture features | GLSZM | 8 | Large-area emphasis, gray-level nonuniformity, size zone nonuniformity, gray-level variance, zone entropy, high-gray-level zone emphasis, small-area high-gray-level emphasis, large-area high-gray-level emphasis |
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| Texture features | GLRLM | 7 | Gray-level nonuniformity, run length nonuniformity, gray-level variance, run entropy, high-gray-level run emphasis, short-run high-gray-level emphasis, long-run high-level emphasis |
Label: GLCM = gray-level cooccurrence matrix; GLSZM = gray-level size zone matrix; GLRLM = gray-level run length matrix.
Figure 4Cluster consensus maps of (a) TMJ condyle and (b) TMJ disc. Note that condyle category 1 means normal (without any osseous change) while category 2 means ART (with any osseous changes); TMJ disc category 1 means normal, while category 2 means anterior disc displacement.
Figure 5ROC analysis by six classifiers of the training set and the validation set for mandibular condyle: “1” indicates normal; “2” indicates degenerative joint diseases.
Evaluation for diagnostic performance by four indicators for mandibular condyle: precision, recall, F1-score, and support in the training set. “1” indicates normal. “2” indicates degenerative joint diseases.
| Indicators | KNN | SVM | XGBoost | RF | LR | DT | ||
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| Training | 1 | Precision | 0.83 | 0.79 | 0.91 | 0.95 | 0.81 | 0.88 |
| Recall | 0.92 | 1.00 | 0.98 | 1.00 | 0.98 | 0.98 | ||
| F1-score | 0.88 | 0.88 | 0.95 | 0.97 | 0.89 | 0.94 | ||
| Support | 53 | 53 | 53 | 53 | 53 | 53 | ||
| 2 | Precision | 0.50 | 0.00 | 0.90 | 1.00 | 0.67 | 0.80 | |
| Recall | 0.29 | 0.00 | 0.64 | 0.79 | 0.14 | 0.74 | ||
| F1-score | 0.36 | 0.00 | 0.75 | 0.88 | 0.24 | 0.76 | ||
| Support | 14 | 14 | 14 | 14 | 14 | 14 | ||
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| Testing | 1 | Precision | 0.81 | 0.78 | 0.81 | 0.78 | 0.78 | 0.70 |
| Recall | 0.93 | 1.00 | 0.93 | 1.00 | 1.00 | 0.86 | ||
| F1-score | 0.87 | 0.88 | 0.87 | 0.88 | 0.88 | 0.83 | ||
| Support | 14 | 14 | 14 | 14 | 14 | 14 | ||
| 2 | Precision | 0.50 | 0.00 | 0.50 | 0.00 | 0.00 | 0.33 | |
| Recall | 0.25 | 0.00 | 0.25 | 0.00 | 0.00 | 0.25 | ||
| F1-score | 0.33 | 0.00 | 0.33 | 0.00 | 0.00 | 0.29 | ||
| Support | 4 | 4 | 4 | 4 | 4 | 4 | ||
LR: logistic regression; RF: random forest; DT: decision tree; KNN: k-nearest neighbors; XGBoost; SVM: support vector machine.
Figure 6ROC analysis by six classifiers of the training set and the validation set for TMJ disc: “1” indicates normal. “2” indicates anterior disc displacement.
Figure 7The selection of K best methods to further evaluate the radiomic with F classifier scores for TMJ disc displacements.
Evaluation for diagnostic performance by four indicators set for TMJ disc: precision, recall, F1-score, and support in the training set. “1” indicates normal. “2” indicates anterior disc displacement.
| Indicators | KNN | SVM | XGBoost | RF | LR | DT | ||
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| Training | 1 | Precision | 0.84 | 0.77 | 0.88 | 0.999 | 0.80 | 0.78 |
| Recall | 0.95 | 1.00 | 0.90 | 0.999 | 0.93 | 0.89 | ||
| F1-score | 0.89 | 0.87 | 0.89 | 0.999 | 0.86 | 0.86 | ||
| Support | 40 | 40 | 40 | 40 | 40 | 40 | ||
| 2 | Precision | 0.71 | 0.00 | 0.64 | 1.00 | 0.50 | 0.54 | |
| Recall | 0.42 | 0.00 | 0.58 | 1.00 | 0.25 | 0.28 | ||
| F1-score | 0.53 | 0.00 | 0.61 | 1.00 | 0.33 | 0.48 | ||
| Support | 12 | 12 | 12 | 12 | 12 | 12 | ||
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| Testing | 1 | Precision | 0.77 | 0.79 | 0.85 | 0.79 | 0.79 | 0.73 |
| Recall | 0.91 | 1.00 | 1.00 | 1.00 | 1.00 | 0.81 | ||
| F1-score | 0.83 | 0.88 | 0.92 | 0.88 | 0.88 | 0.77 | ||
| Support | 11 | 11 | 11 | 11 | 11 | 11 | ||
| 2 | Precision | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.50 | |
| Recall | 0.00 | 0.00 | 0.33 | 0.00 | 0.00 | 0.33 | ||
| F1-score | 0.00 | 0.00 | 0.50 | 0.00 | 0.00 | 0.40 | ||
| Support | 3 | 3 | 3 | 3 | 3 | 3 | ||
Figure 8Examples of classifications made with a random forest model for degenerative joint disease.
Figure 9Examples of classifications made with the random forest model to determine the disc location.