| Literature DB >> 34305563 |
Chunshuai Wu1, Jinjuan Yu2, Guanhua Xu1, Hong Gao1, Yue Sun1, Jiayi Huang1, Li Sun1, Xu Zhang1, Zhiming Cui1.
Abstract
Spinal cord injury (SCI) is a common but severe disease caused by traffic accidents. Coronary atherosclerotic heart disease (CHD) caused by dyslipidemia is known as the leading cause of death in patients with SCI. However, the quantitative analysis showed that the cholesterol and lipoprotein concentrations in peripheral blood (PB) did not change significantly within 48 h after SCI. Due to the presence of the Blood spinal cord barrier (BSCB), there are only few studies concerning the plasma cholesterol metabolism in the acute phase of SCI. Exosomes have a smaller particle size, which enables them relatively less limitation of BSCB. This study uses exosomes derived from the plasma of 43 patients in the acute phase of SCI and 71 patients in the control group as samples. MS proteomics and bioinformatics analysis found 590 quantifiable proteins, in which 75 proteins were upregulated and 153 proteins were downregulated, and the top 10 differentially expressed proteins are those including downregulating proteins: HIST1H4A, HIST2H3A, HIST2H2BE, HCLS1, S100A9, HIST1H2BM, S100A8, CALM3, YWHAH, and SFN, and upregulating proteins: SERPIND1, C1QB, SPTLC3, IGHV4-28, C4A, IGHV4-38-2, IGHV4-30-2, SLC15A1, C4B, and ACTG2. Enrichment analysis showed that the largest part of proteins was related to cholesterol metabolism among the downregulated proteins. The main components of cholesterol [ApoB-48 and ApoB-100 increased, ApoA-I, ApoA-II, ApoA-IV, ApoC, ApoE, and Apo(a) decreased] were changed in exosomes derived from plasma of patients. ELISA analysis showed that some components were disordered in the acute phase of SCI. These results suggested that the exosomes might be involved in cholesterol metabolism regulation in the acute phase of SCI.Entities:
Keywords: bioinformatic analysis; cholesterol metabolism; exosome; proteomics; spinal cord injury
Year: 2021 PMID: 34305563 PMCID: PMC8299276 DOI: 10.3389/fninf.2021.662967
Source DB: PubMed Journal: Front Neuroinform ISSN: 1662-5196 Impact factor: 4.081
The expression of cholesterol and lipoprotein concentrations.
| TG | Sbef48h | 1.673 | 1.796 | 0.248 |
| Cbef48h | 1.385 | 0.833 | ||
| TC | Sbef48h | 4.013 | 0.904 | 0.707 |
| Cbef48h | 4.081 | 0.986 | ||
| HDL-c | Sbef48h | 1.211 | 0.411 | 0.600 |
| Cbef48h | 1.254 | 0.438 | ||
| LDL-c | Sbef48h | 2.263 | 0.737 | 0.144 |
| Cbef48h | 2.487 | 0.864 | ||
| ApoA | Sbef48h | 1.140 | 0.515 | 0.087 |
| Cbef48h | 1.026 | 0.168 | ||
| ApoB | Sbef48h | 1.000 | 0.724 | 0.787 |
| Cbef48h | 0.966 | 0.479 | ||
| Lp(a) | Sbef48h | 1.372 | 1.691 | 0.257 |
| Cbef48h | 1.775 | 2.030 | ||
Figure 1Characterization of human plasma delivered exosomes. (A) The morphology of exosomes by TEM. (B) The specific exosomes surface markers (CD9 and CD63) by western blotting. (C) Nanoparticle tracking analysis of exosomes.
Figure 2Overview of differentially expressed proteins in human plasma delivered exosomes. (A) The hot map of differently expressed proteins in exosomes. (B) Number of up-regulated and down-regulated proteins. (C) Gene Ontology functional analysis of differently expressed proteins in exosomes (biological process, cellular component, and molecular function). (D) Subcellular localization analysis of differently expressed proteins in exosomes.
Top10 differentially expressed proteins and details.
| P62805 | HIST1H4A | 0.023 | Down | 11.367 | Nucleus | K11254 |
| Q71DI3 | HIST2H3A | 0.03 | Down | 15.388 | Nucleus | K11253 |
| Q16778 | HIST2H2BE | 0.03 | Down | 13.92 | Nucleus | K11252 |
| P14317 | HCLS1 | 0.053 | Down | 54.013 | Cytoplasm | K06106 |
| P06702 | S100A9 | 0.097 | Down | 13.242 | Cytoplasm | K21128 |
| Q99879 | HIST1H2BM | 0.112 | Down | 13.989 | Nucleus | K11252 |
| P05109 | S100A8 | 0.119 | Down | 10.834 | Mitochondria | K21127 |
| P0DP25 | CALM3 | 0.197 | Down | 16.837 | Cytoplasm, nucleus | K02183 |
| Q04917 | YWHAH | 0.202 | Down | 28.218 | Cytoplasm | K16198 |
| P31947 | SFN | 0.24 | Down | 27.774 | Cytoplasm, nucleus | K06644 |
| P05546 | SERPIND1 | 1.783 | Up | 57.07 | Extracellular | K03912 |
| P02746 | C1QB | 1.986 | Up | 26.721 | Extracellular | K03987 |
| Q9NUV7 | SPTLC3 | 2.029 | Up | 62.049 | Nucleus | K00654 |
| A0A0C4DH34 | IGHV4-28 | 2.04 | Up | 13.124 | Extracellular | K06856 |
| P0C0L4 | C4A | 2.1 | Up | 192.78 | Extracellular | K03989 |
| P0DP08 | IGHV4-38-2 | 2.177 | Up | 13.016 | Extracellular | K06856 |
| A0A087WSY4 | IGHV4-30-2 | 2.736 | Up | 13.025 | Extracellular | K06856 |
| P46059 | SLC15A1 | 3.133 | Up | 78.805 | Plasma membrane | K14206 |
| P0C0L5 | C4B | 3.464 | Up | 192.75 | Extracellular | K03989 |
| P63267 | ACTG2 | 4.221 | Up | 41.876 | Cytoskeleton | K12315 |
Figure 3Functional enrichment analysis of differentially expressed proteins in human plasma delivered exosomes. (A) Enrichment analysis on both GO classification and KEGG pathway in each comparison group. (B) The hot map of KEGG pathway enrichment analysis. Left side, Upregulated clarify; Right side, Downregulated clarify.
Figure 4The cholesterol metabolism pathway and Elisa analysis of the components of cholesterol and lipoprotein. (A) hsa04979 KEGG pathway about the cholesterol metabolism (red, increased; green, decreased). (B) Elisa analysis of individual components of cholesterol in plasma. *P < 0.05.