Literature DB >> 34297541

Directed Evolution: Methodologies and Applications.

Yajie Wang1,2,3, Pu Xue1,2,3, Mingfeng Cao3, Tianhao Yu1,2,3, Stephan T Lane2,3, Huimin Zhao1,2,3,4.   

Abstract

Directed evolution aims to expedite the natural evolution process of biological molecules and systems in a test tube through iterative rounds of gene diversifications and library screening/selection. It has become one of the most powerful and widespread tools for engineering improved or novel functions in proteins, metabolic pathways, and even whole genomes. This review describes the commonly used gene diversification strategies, screening/selection methods, and recently developed continuous evolution strategies for directed evolution. Moreover, we highlight some representative applications of directed evolution in engineering nucleic acids, proteins, pathways, genetic circuits, viruses, and whole cells. Finally, we discuss the challenges and future perspectives in directed evolution.

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Year:  2021        PMID: 34297541     DOI: 10.1021/acs.chemrev.1c00260

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


  20 in total

Review 1.  Molecular advances in microbial α-galactosidases: challenges and prospects.

Authors:  Grace Sathyanesan Anisha
Journal:  World J Microbiol Biotechnol       Date:  2022-07-01       Impact factor: 3.312

2.  Natural Evolution Provides Strong Hints about Laboratory Evolution of Designer Enzymes.

Authors:  Wen Jun Xie; Arieh Warshel
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-28       Impact factor: 12.779

Review 3.  The structures and applications of microbial chondroitin AC lyase.

Authors:  Xiao-Man Fan; Li-Jian Zhou; Jia-Ying Huang; Ye-Wang Zhang
Journal:  World J Microbiol Biotechnol       Date:  2022-08-23       Impact factor: 4.253

4.  Enhancing the Thermostability of Phytase to Boiling Point by Evolution-Guided Design.

Authors:  Qian Wang; Xiaoqing Liu; Jian Tian; Yaru Wang; Honglian Zhang; Yuan Wang; Huiying Luo; Bin Yao; Huoqing Huang; Tao Tu
Journal:  Appl Environ Microbiol       Date:  2022-05-12       Impact factor: 5.005

Review 5.  Methods for the directed evolution of biomolecular interactions.

Authors:  Victoria Cochran Xie; Matthew J Styles; Bryan C Dickinson
Journal:  Trends Biochem Sci       Date:  2022-05       Impact factor: 14.264

Review 6.  Strategies for Improving Small-Molecule Biosensors in Bacteria.

Authors:  Corwin A Miller; Joanne M L Ho; Matthew R Bennett
Journal:  Biosensors (Basel)       Date:  2022-01-25

7.  Using continuous directed evolution to improve enzymes for plant applications.

Authors:  Jorge D García-García; Kristen Van Gelder; Jaya Joshi; Ulschan Bathe; Bryan J Leong; Steven D Bruner; Chang C Liu; Andrew D Hanson
Journal:  Plant Physiol       Date:  2022-02-04       Impact factor: 8.340

Review 8.  Synthetic Biology-Driven Microbial Production of Resveratrol: Advances and Perspectives.

Authors:  Chao Feng; Jing Chen; Wenxin Ye; Kaisen Liao; Zhanshi Wang; Xiaofei Song; Mingqiang Qiao
Journal:  Front Bioeng Biotechnol       Date:  2022-01-20

9.  Single Mutation on Trastuzumab Modulates the Stability of Antibody-Drug Conjugates Built Using Acetal-Based Linkers and Thiol-Maleimide Chemistry.

Authors:  Xhenti Ferhati; Ester Jiménez-Moreno; Emily A Hoyt; Giulia Salluce; Mar Cabeza-Cabrerizo; Claudio D Navo; Ismael Compañón; Padma Akkapeddi; Maria J Matos; Noelia Salaverri; Pablo Garrido; Alfredo Martínez; Víctor Laserna; Thomas V Murray; Gonzalo Jiménez-Osés; Peter Ravn; Gonçalo J L Bernardes; Francisco Corzana
Journal:  J Am Chem Soc       Date:  2022-03-16       Impact factor: 15.419

10.  Enzyme modification using mutation site prediction method for enhancing the regioselectivity of substrate reaction sites.

Authors:  Jinzen Ikebe; Munenori Suzuki; Aya Komori; Kaito Kobayashi; Tomoshi Kameda
Journal:  Sci Rep       Date:  2021-10-04       Impact factor: 4.996

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