Literature DB >> 34292542

Study of Fe-S Cluster Proteins in Methanococcus maripaludis , a Model Archaeal Organism.

Cuiping Zhao1, Christina A Roberts2, Ian J Drake3, Yuchen Liu4.   

Abstract

Iron-sulfur (Fe-S) clusters are among the oldest and most versatile cofactors present in all domains of life. Many bacterial and eukaryotic Fe-S proteins have been well-characterized, whereas the archaeal ones are less studied. Fe-S proteins are particularly abundant and play essential roles in methanogenic archaea. Methanococcus maripaludis is a model methanogen with available genetic tools. Here, we describe the techniques for anaerobic cultivation of M. maripaludis with formate, liposome-mediated transformation, expression and anoxic affinity purification of Fe-S proteins, Fe-S cluster reconstitution, and analysis of Fe-S proteins by UV-visible absorption spectroscopy.
© 2021. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Anaerobic cultivation; Anoxic protein purification; Archaea; Fe-S cluster reconstitution; Iron-sulfur clusters; Liposome-mediated transformation; Methanococcus; Methanogen; UV-visible absorption spectroscopy

Mesh:

Substances:

Year:  2021        PMID: 34292542     DOI: 10.1007/978-1-0716-1605-5_2

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  26 in total

Review 1.  Structure, function, and formation of biological iron-sulfur clusters.

Authors:  Deborah C Johnson; Dennis R Dean; Archer D Smith; Michael K Johnson
Journal:  Annu Rev Biochem       Date:  2005       Impact factor: 23.643

Review 2.  Iron-sulphur clusters and the problem with oxygen.

Authors:  James A Imlay
Journal:  Mol Microbiol       Date:  2006-02       Impact factor: 3.501

3.  Evolution of the structure of ferredoxin based on living relics of primitive amino Acid sequences.

Authors:  R V Eck; M O Dayhoff
Journal:  Science       Date:  1966-04-15       Impact factor: 47.728

Review 4.  Metabolic, phylogenetic, and ecological diversity of the methanogenic archaea.

Authors:  Yuchen Liu; William B Whitman
Journal:  Ann N Y Acad Sci       Date:  2008-03       Impact factor: 5.691

5.  The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters.

Authors:  Tristan Wagner; Ulrich Ermler; Seigo Shima
Journal:  Science       Date:  2016-10-07       Impact factor: 47.728

6.  Cysteine is not the sulfur source for iron-sulfur cluster and methionine biosynthesis in the methanogenic archaeon Methanococcus maripaludis.

Authors:  Yuchen Liu; Magdalena Sieprawska-Lupa; William B Whitman; Robert H White
Journal:  J Biol Chem       Date:  2010-08-06       Impact factor: 5.157

Review 7.  Iron-sulfur protein folds, iron-sulfur chemistry, and evolution.

Authors:  Jacques Meyer
Journal:  J Biol Inorg Chem       Date:  2007-11-09       Impact factor: 3.358

Review 8.  Roles of Fe-S proteins: from cofactor synthesis to iron homeostasis to protein synthesis.

Authors:  Debkumar Pain; Andrew Dancis
Journal:  Curr Opin Genet Dev       Date:  2016-04-07       Impact factor: 5.578

9.  Methanogenesis.

Authors:  Zhe Lyu; Nana Shao; Taiwo Akinyemi; William B Whitman
Journal:  Curr Biol       Date:  2018-07-09       Impact factor: 10.834

10.  Methanogens: pushing the boundaries of biology.

Authors:  Nicole R Buan
Journal:  Emerg Top Life Sci       Date:  2018-12-14
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