Literature DB >> 34280469

Noncoding RNA crosstalk in brain health and diseases.

Suresh L Mehta1, Anil K Chokkalla2, Raghu Vemuganti3.   

Abstract

The mammalian brain expresses several classes of noncoding RNAs (ncRNAs), including long ncRNAs (lncRNAs), circular RNAs (circRNAs), and microRNAs (miRNAs). These ncRNAs play vital roles in regulating cellular processes by RNA/protein scaffolding, sponging and epigenetic modifications during the pathophysiological conditions, thereby controlling transcription and translation. Some of these functions are the result of crosstalk between ncRNAs to form a competitive endogenous RNA network. These intricately organized networks comprise lncRNA/miRNA, circRNA/miRNA, or lncRNA/miRNA/circRNA, leading to crosstalk between coding and ncRNAs through miRNAs. The miRNA response elements predominantly mediate the ncRNA crosstalk to buffer the miRNAs and thereby fine-tune and counterbalance the genomic changes and regulate neuronal plasticity, synaptogenesis and neuronal differentiation. The perturbed levels and interactions of the ncRNAs could lead to pathologic events like apoptosis and inflammation. Although the regulatory landscape of the ncRNA crosstalk is still evolving, some well-known examples such as lncRNA Malat1 sponging miR-145, circRNA CDR1as sponging miR-7, and lncRNA Cyrano and the circRNA CDR1as regulating miR-7, has been shown to affect brain function. The ability to manipulate these networks is crucial in determining the functional outcome of central nervous system (CNS) pathologies. The focus of this review is to highlights the interactions and crosstalk of these networks in regulating pathophysiologic CNS function.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Brain; Circular RNAs; Crosstalk; Long noncoding RNAs; MicroRNAs; Pathophysiology

Mesh:

Substances:

Year:  2021        PMID: 34280469      PMCID: PMC8387393          DOI: 10.1016/j.neuint.2021.105139

Source DB:  PubMed          Journal:  Neurochem Int        ISSN: 0197-0186            Impact factor:   4.297


  159 in total

1.  Exon-intron circular RNAs regulate transcription in the nucleus.

Authors:  Zhaoyong Li; Chuan Huang; Chun Bao; Liang Chen; Mei Lin; Xiaolin Wang; Guolin Zhong; Bin Yu; Wanchen Hu; Limin Dai; Pengfei Zhu; Zhaoxia Chang; Qingfa Wu; Yi Zhao; Ya Jia; Ping Xu; Huijie Liu; Ge Shan
Journal:  Nat Struct Mol Biol       Date:  2015-02-09       Impact factor: 15.369

2.  Downregulation of miR-23a and miR-27a following experimental traumatic brain injury induces neuronal cell death through activation of proapoptotic Bcl-2 proteins.

Authors:  Boris Sabirzhanov; Zaorui Zhao; Bogdan A Stoica; David J Loane; Junfang Wu; Carlos Borroto; Susan G Dorsey; Alan I Faden
Journal:  J Neurosci       Date:  2014-07-23       Impact factor: 6.167

3.  Detection and monitoring of microRNA expression in developing mouse brain and fixed brain cryosections.

Authors:  Davide De Pietri Tonelli; Yoanne M Clovis; Wieland B Huttner
Journal:  Methods Mol Biol       Date:  2014

4.  Circular RNA Expression Profiles Alter Significantly after Traumatic Brain Injury in Rats.

Authors:  Bao-Shu Xie; Yi-Qin Wang; Yong Lin; Cheng-Cheng Zhao; Qing Mao; Jun-Feng Feng; Jia-Yu Cao; Guo-Yi Gao; Ji-Yao Jiang
Journal:  J Neurotrauma       Date:  2018-04-12       Impact factor: 5.269

Review 5.  Nuclear Long Noncoding RNAs: Key Regulators of Gene Expression.

Authors:  Qinyu Sun; Qinyu Hao; Kannanganattu V Prasanth
Journal:  Trends Genet       Date:  2018-02-07       Impact factor: 11.639

6.  RIblast: an ultrafast RNA-RNA interaction prediction system based on a seed-and-extension approach.

Authors:  Tsukasa Fukunaga; Michiaki Hamada
Journal:  Bioinformatics       Date:  2017-09-01       Impact factor: 6.937

7.  Biosynthesis of Circular RNA ciRS-7/CDR1as Is Mediated by Mammalian-wide Interspersed Repeats.

Authors:  Rei Yoshimoto; Karim Rahimi; Thomas B Hansen; Jørgen Kjems; Akila Mayeda
Journal:  iScience       Date:  2020-07-04

8.  LncRNA SNHG6 functions as a ceRNA to regulate neuronal cell apoptosis by modulating miR-181c-5p/BIM signalling in ischaemic stroke.

Authors:  Xi'an Zhang; Zhanhui Liu; Qing Shu; Shanqi Yuan; Zhiguo Xing; Jinning Song
Journal:  J Cell Mol Med       Date:  2019-07-23       Impact factor: 5.310

9.  Novel insight into circular RNA HECTD1 in astrocyte activation via autophagy by targeting MIR142-TIPARP: implications for cerebral ischemic stroke.

Authors:  Bing Han; Yuan Zhang; Yanhong Zhang; Ying Bai; Xufeng Chen; Rongrong Huang; Fangfang Wu; Shuo Leng; Jie Chao; John H Zhang; Gang Hu; Honghong Yao
Journal:  Autophagy       Date:  2018-07-20       Impact factor: 16.016

10.  Genome-Wide Profiling of miRNA and mRNA Expression in Alzheimer's Disease.

Authors:  Wan-Sheng Chang; Yong-Hong Wang; Xiao-Tun Zhu; Chuan-Jie Wu
Journal:  Med Sci Monit       Date:  2017-06-04
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  6 in total

Review 1.  Role of autophagy and transcriptome regulation in acute brain injury.

Authors:  Vijay Arruri; Raghu Vemuganti
Journal:  Exp Neurol       Date:  2022-03-05       Impact factor: 5.620

Review 2.  Functional Interactions Between lncRNAs/circRNAs and miRNAs: Insights Into Rheumatoid Arthritis.

Authors:  Juan-Juan Han; Xue-Qiang Wang; Xin-An Zhang
Journal:  Front Immunol       Date:  2022-02-07       Impact factor: 7.561

Review 3.  The Novel Regulatory Role of the lncRNA-miRNA-mRNA Axis in Chronic Inflammatory Airway Diseases.

Authors:  Xin Qiao; Gang Hou; Yu-Lin He; Dong-Fang Song; Yi An; Abdullah Altawil; Xiao-Ming Zhou; Qiu-Yue Wang; Jian Kang; Yan Yin
Journal:  Front Mol Biosci       Date:  2022-06-13

Review 4.  Research progress on astrocyte autophagy in ischemic stroke.

Authors:  Pei-Wei Su; Zhe Zhai; Tong Wang; Ya-Nan Zhang; Yuan Wang; Ke Ma; Bing-Bing Han; Zhi-Chun Wu; Hua-Yun Yu; Hai-Jun Zhao; Shi-Jun Wang
Journal:  Front Neurol       Date:  2022-08-30       Impact factor: 4.086

5.  Adult Neural Stem Cell Regulation by Small Non-coding RNAs: Physiological Significance and Pathological Implications.

Authors:  Amber Penning; Giorgia Tosoni; Oihane Abiega; Pascal Bielefeld; Caterina Gasperini; Davide De Pietri Tonelli; Carlos P Fitzsimons; Evgenia Salta
Journal:  Front Cell Neurosci       Date:  2022-01-04       Impact factor: 5.505

6.  The Assessment of Selected miRNA Profile in Familial Mediterranean Fever.

Authors:  Cigdem Yuce Kahraman; Mehmet Ertugrul Egin; Abdulgani Tatar; Hasan Turkez; Adil Mardinoglu
Journal:  Biomed Res Int       Date:  2021-10-13       Impact factor: 3.411

  6 in total

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