Literature DB >> 3427110

The DNA sequence of the human beta-globin region is strongly biased in favor of long strings of contiguous purine or pyrimidine residues.

M J Behe1.   

Abstract

The DNA sequence of the human beta-globin region, comprising over 67 kilobase pairs, has been analyzed for the occurrence of strings of contiguous purine or pyrimidine residues. Tracts of 10 or more contiguous residues are found 4 times more frequently than would be expected with a random distribution of bases, so that a long string occurs at an average of every 250 base pairs. A survey of six other human gene sequences, totaling 86 kilobase pairs, shows a remarkably similar result. No such overrepresentation of contiguous purine or pyrimidine residues is found in the bacteriophages lambda or T7.

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Year:  1987        PMID: 3427110     DOI: 10.1021/bi00398a050

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  21 in total

1.  Triplex formation by oligonucleotides containing novel deoxycytidine derivatives.

Authors:  C Y Huang; G Bi; P S Miller
Journal:  Nucleic Acids Res       Date:  1996-07-01       Impact factor: 16.971

2.  Distribution of CT-rich tracts is conserved in vertebrate chromosomes.

Authors:  A K Wong; H A Yee; J H van de Sande; J B Rattner
Journal:  Chromosoma       Date:  1990-09       Impact factor: 4.316

3.  Targeting pyrimidine single strands by triplex formation: structural optimization of binding.

Authors:  T Vo; S Wang; E T Kool
Journal:  Nucleic Acids Res       Date:  1995-08-11       Impact factor: 16.971

4.  In vitro transcription of a poly(dA) x poly(dT)-containing sequence is inhibited by interaction between the template and its transcripts.

Authors:  R Kiyama; M Oishi
Journal:  Nucleic Acids Res       Date:  1996-11-15       Impact factor: 16.971

5.  Characteristic enrichment of DNA repeats in different genomes.

Authors:  R Cox; S M Mirkin
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-13       Impact factor: 11.205

6.  Spectroscopic and calorimetric investigation on the DNA triplex formed by d(CTCTTCTTTCTTTTCTTTCTTCTC) and d(GAGAAGAAAGA) at acidic pH.

Authors:  L E Xodo; G Manzini; F Quadrifoglio
Journal:  Nucleic Acids Res       Date:  1990-06-25       Impact factor: 16.971

7.  An oligopurine sequence bias occurs in eukaryotic viruses.

Authors:  A M Beasty; M J Behe
Journal:  Nucleic Acids Res       Date:  1988-02-25       Impact factor: 16.971

8.  Sequence dependent effects in methylphosphonate deoxyribonucleotide double and triple helical complexes.

Authors:  L Kibler-Herzog; B Kell; G Zon; K Shinozuka; S Mizan; W D Wilson
Journal:  Nucleic Acids Res       Date:  1990-06-25       Impact factor: 16.971

9.  The herpes simplex virus 1 segment inversion site is specifically cleaved by a virus-induced nuclear endonuclease.

Authors:  F Wohlrab; S Chatterjee; R D Wells
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-01       Impact factor: 11.205

10.  An overabundance of long oligopurine tracts occurs in the genome of simple and complex eukaryotes.

Authors:  M J Behe
Journal:  Nucleic Acids Res       Date:  1995-02-25       Impact factor: 16.971

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