| Literature DB >> 34260132 |
Dongxu Liu1,2,3,4, Liangqian Yu1,3,4, Lulu Wei2,3,4, Pugang Yu1,3, Jing Wang2,3, Zhao Hu1,3, Yuting Zhang1,3, Shuntai Zhang5, Zhiquan Yang2,3, Guanqun Chen6, Xuan Yao2,3, Yanjun Yang5, Yongming Zhou1, Xuemin Wang7,8, Shaoping Lu1,3, Cheng Dai1,3, Qing-Yong Yang1,2,3, Liang Guo1,3.
Abstract
With the increasing availability of massive transcriptome data in plants, it is possible to construct a comprehensive database with multiple transcriptome data and online imputation tools. Online databases with integrated, multifaceted functions for exploring published RNA-seq libraries or microarrays are available for several plant species (Darwish et al., 2013; Xia et al., 2017; Zhang et al., 2020), helping researchers take advantage of the vast collection of public datasets. Brassica napus (AACC, 2n = 38) is one of the most important oil crops, originating from a spontaneous hybridization between Brassica rapa (AA, 2n = 20) and Brassica oleracea (CC, 2n = 18) (Chalhoub et al., 2014). Recently, an online transcriptome database has been built in B. napus (Chao et al., 2020). This database includes transcriptomes from different labs with various genotypes and growth conditions, which affects the usability. A database with comprehensive transcriptomes from one B. napus genotype is greatly needed. This article is protected by copyright. All rights reserved.Entities:
Keywords: zzm321990Brassica napuszzm321990; Co-expression; Database; Transcriptome
Year: 2021 PMID： 34260132 DOI： 10.1111/pbi.13665
Source DB: PubMed Journal: Plant Biotechnol J ISSN： 1467-7644 Impact factor: 9.803