Literature DB >> 34244880

Artificial Intelligence-Assisted Early Detection of Retinitis Pigmentosa - the Most Common Inherited Retinal Degeneration.

Ta-Ching Chen1,2, Wee Shin Lim3, Victoria Y Wang4, Mei-Lan Ko5, Shu-I Chiu3, Yu-Shu Huang1, Feipei Lai6, Chung-May Yang1, Fung-Rong Hu1, Jyh-Shing Roger Jang7, Chang-Hao Yang8.   

Abstract

The purpose of this study was to detect the presence of retinitis pigmentosa (RP) based on color fundus photographs using a deep learning model. A total of 1670 color fundus photographs from the Taiwan inherited retinal degeneration project and National Taiwan University Hospital were acquired and preprocessed. The fundus photographs were labeled RP or normal and divided into training and validation datasets (n = 1284) and a test dataset (n = 386). Three transfer learning models based on pre-trained Inception V3, Inception Resnet V2, and Xception deep learning architectures, respectively, were developed to classify the presence of RP on fundus images. The model sensitivity, specificity, and area under the receiver operating characteristic (AUROC) curve were compared. The results from the best transfer learning model were compared with the reading results of two general ophthalmologists, one retinal specialist, and one specialist in retina and inherited retinal degenerations. A total of 935 RP and 324 normal images were used to train the models. The test dataset consisted of 193 RP and 193 normal images. Among the three transfer learning models evaluated, the Xception model had the best performance, achieving an AUROC of 96.74%. Gradient-weighted class activation mapping indicated that the contrast between the periphery and the macula on fundus photographs was an important feature in detecting RP. False-positive results were mostly obtained in cases of high myopia with highly tessellated retina, and false-negative results were mostly obtained in cases of unclear media, such as cataract, that led to a decrease in the contrast between the peripheral retina and the macula. Our model demonstrated the highest accuracy of 96.00%, which was comparable with the average results of 81.50%, of the other four ophthalmologists. Moreover, the accuracy was obtained at the same level of sensitivity (95.71%), as compared to an inherited retinal disease specialist. RP is an important disease, but its early and precise diagnosis is challenging. We developed and evaluated a transfer-learning-based model to detect RP from color fundus photographs. The results of this study validate the utility of deep learning in automating the identification of RP from fundus photographs.
© 2021. Society for Imaging Informatics in Medicine.

Entities:  

Keywords:  Artificial intelligence; Deep learning; Fundus photograph; Image analysis; Retinitis pigmentosa

Mesh:

Year:  2021        PMID: 34244880      PMCID: PMC8455770          DOI: 10.1007/s10278-021-00479-6

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.903


  13 in total

1.  Optimal cut-point and its corresponding Youden Index to discriminate individuals using pooled blood samples.

Authors:  Enrique F Schisterman; Neil J Perkins; Aiyi Liu; Howard Bondell
Journal:  Epidemiology       Date:  2005-01       Impact factor: 4.822

2.  Deep-learning based, automated segmentation of macular edema in optical coherence tomography.

Authors:  Cecilia S Lee; Ariel J Tyring; Nicolaas P Deruyter; Yue Wu; Ariel Rokem; Aaron Y Lee
Journal:  Biomed Opt Express       Date:  2017-06-23       Impact factor: 3.732

3.  Development and Validation of a Deep Learning Algorithm for Detection of Diabetic Retinopathy in Retinal Fundus Photographs.

Authors:  Varun Gulshan; Lily Peng; Marc Coram; Martin C Stumpe; Derek Wu; Arunachalam Narayanaswamy; Subhashini Venugopalan; Kasumi Widner; Tom Madams; Jorge Cuadros; Ramasamy Kim; Rajiv Raman; Philip C Nelson; Jessica L Mega; Dale R Webster
Journal:  JAMA       Date:  2016-12-13       Impact factor: 56.272

Review 4.  Gene therapy beyond luxturna: a new horizon of the treatment for inherited retinal disease.

Authors:  Dominic A Prado; Marcy Acosta-Acero; Ramiro S Maldonado
Journal:  Curr Opin Ophthalmol       Date:  2020-05       Impact factor: 3.761

5.  Automated Grading of Age-Related Macular Degeneration From Color Fundus Images Using Deep Convolutional Neural Networks.

Authors:  Philippe M Burlina; Neil Joshi; Michael Pekala; Katia D Pacheco; David E Freund; Neil M Bressler
Journal:  JAMA Ophthalmol       Date:  2017-11-01       Impact factor: 7.389

6.  Deep learning for the segmentation of preserved photoreceptors on en face optical coherence tomography in two inherited retinal diseases.

Authors:  Acner Camino; Zhuo Wang; Jie Wang; Mark E Pennesi; Paul Yang; David Huang; Dengwang Li; Yali Jia
Journal:  Biomed Opt Express       Date:  2018-06-12       Impact factor: 3.732

7.  Telemedicine screening of retinal diseases with a handheld portable non-mydriatic fundus camera.

Authors:  Kai Jin; Haitong Lu; Zhaoan Su; Chuming Cheng; Juan Ye; Dahong Qian
Journal:  BMC Ophthalmol       Date:  2017-06-13       Impact factor: 2.209

8.  Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs.

Authors:  Mark Christopher; Akram Belghith; Christopher Bowd; James A Proudfoot; Michael H Goldbaum; Robert N Weinreb; Christopher A Girkin; Jeffrey M Liebmann; Linda M Zangwill
Journal:  Sci Rep       Date:  2018-11-12       Impact factor: 4.379

9.  Prediction of Causative Genes in Inherited Retinal Disorders from Spectral-Domain Optical Coherence Tomography Utilizing Deep Learning Techniques.

Authors:  Yu Fujinami-Yokokawa; Nikolas Pontikos; Lizhu Yang; Kazushige Tsunoda; Kazutoshi Yoshitake; Takeshi Iwata; Hiroaki Miyata; Kaoru Fujinami; On Behalf Of Japan Eye Genetics Consortium
Journal:  J Ophthalmol       Date:  2019-04-09       Impact factor: 1.909

Review 10.  Artificial intelligence and deep learning in ophthalmology.

Authors:  Daniel Shu Wei Ting; Louis R Pasquale; Lily Peng; John Peter Campbell; Aaron Y Lee; Rajiv Raman; Gavin Siew Wei Tan; Leopold Schmetterer; Pearse A Keane; Tien Yin Wong
Journal:  Br J Ophthalmol       Date:  2018-10-25       Impact factor: 4.638

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  1 in total

Review 1.  A Systematic Review of Artificial Intelligence Applications Used for Inherited Retinal Disease Management.

Authors:  Meltem Esengönül; Ana Marta; João Beirão; Ivan Miguel Pires; António Cunha
Journal:  Medicina (Kaunas)       Date:  2022-03-31       Impact factor: 2.948

  1 in total

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