Organic-organic interactions play important roles in secondary organic aerosol formation, but the interactions are complex and poorly understood. Here, we use environmental molecular beam experiments combined with molecular dynamics simulations to investigate the interactions between methanol and nopinone, as atmospheric organic proxies. In the experiments, methanol monomers and clusters are sent to collide with three types of surfaces, i.e., graphite, thin nopinone coating on graphite, and nopinone multilayer surfaces, at temperatures between 140 and 230 K. Methanol monomers are efficiently scattered from the graphite surface, whereas the scattering is substantially suppressed from nopinone surfaces. The thermal desorption from the three surfaces is similar, suggesting that all the surfaces have weak or similar influences on methanol desorption. All trapped methanol molecules completely desorb within a short experimental time scale at temperatures of 180 K and above. At lower temperatures, the desorption rate decreases, and a long experimental time scale is used to resolve the desorption, where three desorption components are identified. The fast component is beyond the experimental detection limit. The intermediate component exhibits multistep desorption character and has an activation energy of Ea = 0.18 ± 0.03 eV, in good agreement with simulation results. The slow desorption component is related to diffusion processes due to the weak temperature dependence. The molecular dynamics results show that upon collisions the methanol clusters shatter, and the shattered fragments quickly diffuse and recombine to clusters. Desorption involves a series of processes, including detaching from clusters and desorbing as monomers. At lower temperatures, methanol forms compact cluster structures while at higher temperatures, the methanol molecules form layered structures on the nopinone surface, which are visible in the simulation. Also, the simulation is used to study the liquid-liquid interaction, where the methanol clusters completely dissolve in liquid nopinone, showing ideal organic-organic mixing.
Organic-organic interactions play important roles in secondary organic aerosol formation, but the interactions are complex and poorly understood. Here, we use environmental molecular beam experiments combined with molecular dynamics simulations to investigate the interactions between methanol and nopinone, as atmospheric organic proxies. In the experiments, methanol monomers and clusters are sent to collide with three types of surfaces, i.e., graphite, thin nopinone coating on graphite, and nopinone multilayer surfaces, at temperatures between 140 and 230 K. Methanol monomers are efficiently scattered from the graphite surface, whereas the scattering is substantially suppressed from nopinone surfaces. The thermal desorption from the three surfaces is similar, suggesting that all the surfaces have weak or similar influences on methanol desorption. All trapped methanol molecules completely desorb within a short experimental time scale at temperatures of 180 K and above. At lower temperatures, the desorption rate decreases, and a long experimental time scale is used to resolve the desorption, where three desorption components are identified. The fast component is beyond the experimental detection limit. The intermediate component exhibits multistep desorption character and has an activation energy of Ea = 0.18 ± 0.03 eV, in good agreement with simulation results. The slow desorption component is related to diffusion processes due to the weak temperature dependence. The molecular dynamics results show that upon collisions the methanol clusters shatter, and the shattered fragments quickly diffuse and recombine to clusters. Desorption involves a series of processes, including detaching from clusters and desorbing as monomers. At lower temperatures, methanol forms compact cluster structures while at higher temperatures, the methanol molecules form layered structures on the nopinone surface, which are visible in the simulation. Also, the simulation is used to study the liquid-liquid interaction, where the methanol clusters completely dissolve in liquid nopinone, showing ideal organic-organic mixing.
Organic
compounds are omnipresent in the atmosphere and are continuously
undergoing complex interactions and reactions.[1] A sound understanding of atmospheric chemistry and phase transitions
requires not only the individual oxidation pathways from secondary
organic aerosol (SOA) precursors but also needs to take into account
interactions between the multitude of different organics formed.[2] However, the knowledge of organic–organic
interactions, especially on the mechanism at a molecular level, is
limited and therefore largely missing from current climate models
and leads to significant uncertainties when evaluating climate changes.[3]Biogenic volatile organic compounds (BVOCs)
have been recognized
as important precursors for SOA as their volatilities can be significantly
reduced after oxidization.[4] For example,
β-pinene is a common BVOC emitted by coniferous vegetation and
is considered as a major source of aerosol particles.[5] As one of the major oxidation products from β-pinene,[6] nopinone has been found in both the gas and particle
phase of SOA,[7] which motivated the recent
studies on water–nopinone interactions, where nopinone was
considered as a biogenic SOA proxy. Due to the cyclic structure, nopinone
has a relatively high solubility in water compared to other ketones
with similar sizes but linear structures.[8] On the water surface, the uptake of nopinone was found to be reversible
with a wetted-wall flow tube reactor.[9] On
the nopinone surface, the uptake of water molecules and the detailed
molecular dynamics and kinetics were studied by an environmental molecular
beam (EMB) technique.[10,11] The thin coating and multilayer
of nopinone show different water uptake abilities, where more water
was taken up by the nopinone multilayer. Molecular dynamics(MD) simulations
show that bulk diffusion is very limited and that the enhanced water
uptake is instead mainly caused by water molecules that more easily
find strong binding states on the nopinone multilayer surface than
on the thin nopinone coating.[11]Apart
from water vapor–surface interactions, the organics–surface
interactions are also important because of the abundance of organic
vapors in the atmosphere and the key role of gas-to-particle partitioning
of both SOA components and their precursors for SOA formation. A recent
EMB-MD study shows that methanol monomers and clusters are efficiently
trapped on a graphite surface, and the trapped molecules rapidly diffuse
along the surface to find other clusters or form new clusters at low
surface coverages.[12] Methanol molecules
form hydrogen bonds within the clusters internally, which strengthens
the structure and the stability of clusters. Herrera et al.[13] reported that small methanol clusters are preferably
formed on graphite because of the interaction of hydrogen bonds. Detailed
desorption kinetics of methanol from both graphite[14] and graphene[15] has been previously
investigated. Apart from the graphite/graphene surface, various organic
surfaces have also been studied by EMB,[16] including alcohols,[17−19] ketones,[10,11] and carboxylic acids.[20] Yet, interactions of organic molecules/clusters
with organic surfaces have never been studied by molecular beam techniques,
in spite of previous numerous studies on cluster–surface collisions[21−23] and current adaptations of molecular/ion beam techniques to environmental
and organics-related topics.[24−26]The combination of EMB
and MD has been shown to be an effective
approach to study the gas uptake and sorption kinetics of gas interactions
with various surfaces.[11,12,18,27] Here, we investigate the kinetics of methanol
monomers and clusters on nopinone surfaces (thin coating and multilayer)
by EMB experiments and MD simulations. The interspecies interactions
of individual species reveal important kinetics parameters and mixing
states of the binary organic systems.
Methodology
EMB Experiments and Data Analysis
The EMB method is
used to investigate the dynamics and kinetics of
methanol interactions with nopinone surfaces. The experimental setup
has been previously described in detail,[28,29] and consists of a three-chamber differentially pumped beamline.
Beam pulses are generated from a beam source, and a portion of the
pulsed gas flow travels through a skimmer (diameter = 1 mm) to form
a directed low-density beam of molecules in the forward direction.
The nozzle of the beam source is kept at room temperature, such that
no methanol condenses on the nozzle. The beam is composed of methanol
and helium, where a helium (Helium HiQ 6.0, Linde plc) flow (with
a He source pressure of 1 bar) passes through a methanol reservoir
(assay ≥99.9%, Sigma-Aldrich, Inc.) to pick to the methanol
molecules and clusters. The beam is modulated by a chopper with a
frequency of 120 Hz (duty time 50%) for the short experimental time
scale (10 ms) and with a frequency of 8 Hz (duty time 50%) for the
long experimental time scale (60 ms). When measuring the beam using
a quadrupole mass spectrometer (QMS), the most intense peak in the
mass spectrum is m/z = 31 (CH3O+). Other major peaks are m/z = 33, 65, 97, 129, and 161, corresponding to H+(CH3OH) with n = 1–5, i.e., the methanol clusters in the beam. It is not
possible to determine the exact size of clusters due to unknown fragmentation
during ionization, but the clusters are seemingly relatively small,
ranging from a few molecules to tens of molecules per cluster, based
on the facts of the relatively low source pressure, the shape of the
nozzle that is not optimized for cluster production, and the relatively
similar intensities of monomers and clusters.The measured time-of-flight
(ToF) distributions of m/z = 31
(CH3O+) and m/z = 33 (H+CH3OH) intensities show that the clusters
travel with lower velocities than monomers, as known from earlier
studies.[12] The beam is supersonic, and
the estimated mean velocity for monomers is about 1510 m/s, corresponding
to a kinetic energy (KE) of 0.38 eV. The beam passes through a grated
opening and impacts the experimental surfaces with an incident angle
of 45° with respect to the surface normal. The beam pulses then
collide with a surface centered in an environmental chamber (highest
experiment pressure ≈ 10–2 mbar), and the
outgoing flux is measured by a rotatable differentially pumped QMS
for ToF measurements. Ions generated by electron bombardment in the
QMS are detected by a multichannel scaler with a dwell time of 10
μs. The studies presented here are performed with a highly oriented
polycrystalline graphite (HOPG) substrate surface (12 × 12 mm
surface, Advanced Ceramics Corp., grade ZYB), which is cleaned by
keeping it at 600 K before and after experiments. The nopinone surfaces
are prepared by dosing nopinone ((1R)-(+)-nopinone,
98% Sigma-Aldrich Co.) vapor through a leak valve, where the nopinone
multilayer is maintained at a thickness of ∼1 μm. The
properties and thickness of the condensed nopinone layer are monitored
by the helium in the beam and a laser (670 nm) interferometry. The
thickness of the nopinone multilayer is monitored by the laser, whereas
the thin nopinone coating on HOPG cannot be seen by the laser but
is detected by helium scattering.[11] Both
nopinone thin coatings and nopinone multilayers are studied, where
the thin coating is analogous to the coating layer on the soot surface
and the multiple layer can be considered as the model system for a
nopinone SOA particle.The ToF distributions are fitted to resolve
the kinetics and dynamics
of the interactions between the impacting methanol molecules/clusters
with the nopinone surfaces. Typically, impinging molecules can be
scattered inelastically or thermally trapped, thus these components
are sought for in our analysis. Nonlinear least squares fits are carried
out to deconvolute the inelastic scattering (IS) and thermal desorption
(TD) components. The IS component is represented by a velocity-dependent
function,[11,19]where Ci is a scaling parameter, υ
is the velocity calculated
from the molecular arrival time, υ̅ is the average velocity, kB is the Boltzmann constant, m is the molecular mass of methanol, and TIS is a free parameter representing the IS velocity spread. Note that
the electron-impact ionization process in the employed mass spectrometer
is velocity-sensitive and an additional transmission factor (a function
of υ) is taken into account in the classical velocity-dependent
function.[30,31]The TD distributions are each a combination
of two components:
(i) a velocity distribution that relates desorption to molecular excitation
based on the surface temperature,and (ii) another distribution
related to the desorption rates,where Cj is a free scaling factor, Ts in eq is the surface temperature, k is the fitted
desorption rate coefficient, and t is time. ITD1 shows the velocity
spread of the TD flux, and ITD2 accounts
for the exponential decay of ToF distributions. Thus, the TD distributions
are calculated as a convolution of these two components.
MD Simulations
MD simulations are
performed to characterize methanol monomer and cluster collisions
with a solid nopinone surface. The classical mechanics GROMOS force
field[32] optimized for small molecules in
condensed phases is employed to model a nopinone crystal. The force
field is implemented in the GROMACS package[33] with the help of the Automated force field Topology Builder (ATB)
database.[34] The original ATB GROMOS charges
are unable to reproduce melting processes; therefore, a new set of
charges is calculated based on ab initio calculations. RESP[35] point charges fixed on the atomic position are
fitted to best reproduce the electrostatic field induced by the electronic
density of the isolated nopinone molecule calculated on BLYP-D3 level
of theory while having electrons spanned over the DZVP basis set.The equations of motion are integrated using the leap-frog approach[36] and LINCS constrain algorithm,[37] which makes it possible to use a 2 fs time step. A cutoff
distance of 1.8 nm is applied for the short-range interactions, and
long-range electrostatic interactions are treated using the particle
mesh Ewald method.[38] Nopinone crystal temperature
is held at the desired value using the V-rescale algorithm[39] with a coupling time of 0.1 ps.The nopinone
crystal is modeled based on the powder X-ray diffraction
data by Palin et al.[40] The crystal structure
is freely available at the Cambridge structural database.[41] An infinite crystal is created by duplicating
a unit cell in x-, y-, and z-directions. After a minimization with the steepest descent
algorithm, the crystal is equilibrated in the NPT ensemble at 220
K for 10 ns. The simulation system consists of ∼10,000 atoms
placed in an orthorhombic box stretched by a, b, and c vectors sized 3.91 × 4.18
× 7.53 nm. The relaxed crystal is then used to form a slab considering
the most energetically favorable exposed crystal surface; thus, the
crystal is cut between two nopinone bilayers. The simulation box is
then extended up to 2 nm along the z-direction on
each side to avoid image interactions between the slabs. After producing
the nopinone solid slab, methanol interactions with the nopinone surface
are studied at 220 K. Simulations are designed to resemble the experimental
conditions. Monomers and methanol clusters are present in the beam,
therefore both cases are modeled. Methanolis also modeled with the
GROMOS force field[32] and refined RESP[35] point charges are applied as previously explained
for nopinone.First, to model monomer collisions, single methanol
molecules are
sent toward the surface with an incident KE equal to 0.48 eV (1700
m s–1) and with an incident angle of 45° with
respect to the surface normal direction. Methanolis decoupled from
the thermostat to avoid influencing collision dynamics. The initial
(x, y) positions of methanol molecules
are randomly chosen at a distance of 1 nm from the surface and 2000
trajectories are propagated at each studied surface temperature. Methanol
clusters on the nopinone surface system are also investigated. Initially,
10 methanol molecules are packed in a cluster and equilibrated at
180 K in the NVT ensemble. Thereafter, the cluster is placed 1 nm
above the solid nopinone surface at 220 K and consecutively sent toward
the surface at a velocity of 1700 m s–1 and an incident
angle of 45° with respect to the surface normal direction while
being decoupled from the thermostat.
Results
and Discussions
EMB Experiments
Monomer and Cluster Beam Profiles
The molecular beam
used in EMB experiments contains methanol monomers
and methanol clusters of various sizes.[12] The beam composition is varied by changing the beam source off time
(toff = 2.2 or 2.4 ms), which shifts the
beam with respect to the chopper opening. Figure a shows the profiles of the beam recorded
by a ToF mass spectrometer when toff =
2.4 ms, where both clusters and monomers appear as peaks. This feature
allows for the study of the interactions between monomers and the
surfaces. Note that the monomers and clusters are represented by m/z = 31 and 33, respectively, but the
criteria to distinguish them are the velocity differences shown in Figure a. All the peaks
have independent shapes, indicating that the clusters only contributed
to their own primary m/z but not
to others, otherwise the lower m/z values would show contributions from the higher m/z values. The molecular velocities depend on the
monomer or cluster masses, so the lightest mass, i.e., monomers (m/z = 31), appears at the beginning of
the ToF spectrum and the heavier clusters arrive later. Another beam
setting is the cluster beam (toff = 2.2
ms), and the beam profile is shown in Figure b. In this case, the beam is dominated by
clusters with a square-like beam shape, which enables accurate fittings
to the ToF results. Hence, in the desorption kinetics section, this
cluster beam is used.
Figure 1
(a) Beam profiles of monomers and clusters of different
sizes;
(b) beam profiles of m/z = 31 and m/z = 33 for the monomer beam (Toff = 2.4 ms) and the cluster beam (Toff = 2.2 ms); and (c) ToF of the monomer flux
from graphite at 200 K, using the monomer beam (Toff = 2.4 ms) and the cluster beam (Toff = 2.2 ms). The incident and detection angles are both
45°.
(a) Beam profiles of monomers and clusters of different
sizes;
(b) beam profiles of m/z = 31 and m/z = 33 for the monomer beam (Toff = 2.4 ms) and the cluster beam (Toff = 2.2 ms); and (c) ToF of the monomer flux
from graphite at 200 K, using the monomer beam (Toff = 2.4 ms) and the cluster beam (Toff = 2.2 ms). The incident and detection angles are both
45°.Figure c shows
an example of the methanol flux from a 200 K graphite surface after
beam–surface collisions, where the monomer and cluster beams
are compared. For the cluster beam (toff = 2.2 ms), the flux appears as a single peak, while for the monomer
beam (toff = 2.4 ms), there is an additional
component appearing at the beginning of the ToF spectrum. This is
because of the presence of a fraction of monomers that travel faster
than clusters (Figure a), and these monomers result in an IS component. The comparison
of these two fluxes thus shows that methanol monomers are scattered
from the surface while the clusters are not. Under the experimental
incident KE, no cluster flux (m/z 33 and 65) is detected from any surfaces, indicating that methanolis scattered or desorbs only as a monomer.
Inelastic
Scattering and Thermal Desorption
When methanol monomers
impinge on the surfaces of nopinone coating
or the nopinone multilayer, the scattered component is significantly
different compared to that from a graphite surface. Figure a shows that the IS component
(shown in blue dashed lines) from graphite vanishes from its original
position in the nopinone cases. This indicates that methanol molecules
transfer energy efficiently with the nopinone surfaces, which is comparable
to the case of water molecules impinging on nopinone surfaces that
has been studied previously.[10,11] The methanol–nopinone
surface interactions have also been investigated by MD simulations,
where both IS and fast TD are found (Figure S2). Other than that, the desorption components remained almost identical
in the three cases. Because the IS components are subtle, the angular
distribution of total flux from nopinone surfaces are essentially
cosine-shaped (Figure b), which is a characteristic for TD components.
Figure 2
(a) ToF spectra of the
methanol flux from graphite, nopinone coating,
and nopinone multilayer surfaces after monomer beam collisions. The
surface temperatures are 210 K, and the detection angle is 50°
with respect to the surface normal. (b) Angular distributions of the
total methanol flux from graphite, nopinone coating, and the nopinone
multilayer at 210 K. (c) Angular distributions of IS and TD components,
and the IS intensity is multiplied by a factor of 8 to be showed in
the same scale. (d) Angular distributions of measured KE of IS molecules
and three reference curves (KE’). The reference curves have
constant parallel KE dispersion (by a factor of n). The perpendicular KE is also scaled by n, but
it is variable and responsible for the angular dependence.
(a) ToF spectra of the
methanol flux from graphite, nopinone coating,
and nopinone multilayer surfaces after monomer beam collisions. The
surface temperatures are 210 K, and the detection angle is 50°
with respect to the surface normal. (b) Angular distributions of the
total methanol flux from graphite, nopinone coating, and the nopinone
multilayer at 210 K. (c) Angular distributions of IS and TD components,
and the IS intensity is multiplied by a factor of 8 to be showed in
the same scale. (d) Angular distributions of measured KE of IS molecules
and three reference curves (KE’). The reference curves have
constant parallel KE dispersion (by a factor of n). The perpendicular KE is also scaled by n, but
it is variable and responsible for the angular dependence.Figure c
shows
the angular distributions of IS and TD flux intensity from the graphite
surface. The IS intensity peaked at around 54° (c.f., incident angle = 45°), and the IS peaked at wide angles, which
is common for molecules scattering on smooth surfaces.[42]Figure d displays the variation of KE (0.14–0.18 eV) of the
IS molecules, accounting for 37–47% of the initial KE. The
KE decreases as the scattering angle increases, which is because the
graphite surface is smooth on the molecular level, such that the parallel
momentum of impinging molecules is largely conserved. Therefore, the
molecules of higher KE are those conserving a higher perpendicular
momentum. Then, the higher perpendicular momentum and steady parallel
momentum gives higher KE and a lower angle with respect to the normal
(see the reference curves in Figure d).[42−44] Note that the trend of high KE at smaller angles
with respect to the normal may be altered by other parameters, such
as the structure of incident molecules, incident angle, and initial
KE.[45,46] The IS components cannot be fitted for the
observation angles <43° because the signal is too small.
Figure 3
(a) Temperature-dependent
desorption flux from graphite, thin nopinone
coating, and the nopinone multilayer. The intensities have been normalized
to beam intensities. The melting point of bulk methanol is marked
as the purple dotted line. The experimental time scale is 10 ms. Both
the incident angle and detection angle are 45°. (b) ToF of long
experiments (60 ms) at various temperatures. (c) ToF measured at 150
K, fitted by three TD components. (d) Arrhenius plot for the TD2 component
at the temperature range between 140 and 170 K. The green dashed line
is the best fit to the data points, where Ea = 0.18 ± 0.03 eV and A = 1·108.9 ± 0.9. The red dashed line is the best fit with the assumption of A = 1·1013.
(a) Temperature-dependent
desorption flux from graphite, thin nopinone
coating, and the nopinone multilayer. The intensities have been normalized
to beam intensities. The melting point of bulk methanolis marked
as the purple dotted line. The experimental time scale is 10 ms. Both
the incident angle and detection angle are 45°. (b) ToF of long
experiments (60 ms) at various temperatures. (c) ToF measured at 150
K, fitted by three TD components. (d) Arrhenius plot for the TD2 component
at the temperature range between 140 and 170 K. The green dashed line
is the best fit to the data points, where Ea = 0.18 ± 0.03 eV and A = 1·108.9 ± 0.9. The red dashed line is the best fit with the assumption of A = 1·1013.
Desorption Kinetics
The desorption
kinetics is studied by using the cluster beam for its more square-shaped
beam shape. The desorption flux from the graphite, thin nopinone coating,
and nopinone multilayer surfaces shows similar temperature dependence. Figure a shows that the
desorption fluxes increase with temperature below 180 K. Above 180
K, the desorption intensities do not change with temperature, indicating
that all trapped methanol molecules have desorbed within the detection
time scale (10 ms). It is interesting to see that neither the nopinone
coating nor the multilayer influences the methanol uptake compared
to the graphite surface. The insensitivity of all three investigated
surfaces suggests that the desorption processes are dominated by internal
methanol–methanol interactions within clusters. Notably, the
melting point of methanolis ∼175 K (marked with a dashed purple
line in Figure a),
which separates the desorption flux into a temperature-sensitive region
and a temperature-insensitive region.The detection time scales
may potentially influence the quantification of the TD fractions,
especially at lower temperatures.[47] To
account for this, longer experiments with 60 ms scanning time were
carried out and the ToF spectra are shown in Figure b. Apparently, at most temperatures the desorption
does not end by 60 ms, which confirms the existence of slow desorption
channels. Three TD fits are used to fit the 60 ms ToF spectrum at
the temperature range between 140 and 170 K (Figure c). Two TD fits are also attempted but there
were always noticeable residues between fittings and actual data points,
showing that it is necessary to have three TD components (see Figure S1 for example). Note that the ToF at
temperatures higher than the methanol bulk melting point, i.e., 180
and 200 K, cannot be fitted using three TD components but by only
one (the fastest desorption, TD1). The absence of the other two TD
components is likely due to the solid–liquid phase transition
of methanol on the surface, i.e., the TD2 and TD3 are processes occurring
on nonliquid surfaces.As the rates of TD1 are always beyond
the EMB detection limit (EMB
time resolution = 10 μs, i.e., resolvable k must be ≤105 s–1), only the
resolvable rates of TD2 and TD3 are presented in the Arrhenius plot
(Figure d). The slow
TD component (TD3) is likely associated with diffusion-related processes
due to the weak temperature dependence. As for the intermediate desorption
component (TD2), no differences are found among the three kinds of
surfaces. The activation energies are around 0.18 ± 0.03 eV with
a preexponential factor (A) of 1·108.9 ± 0.9. Such low activation energy is comparable to the binding energy
of the methanol monomer on graphite,[48] but
the low A value indicates that the yielded activation
energy is a result from complicated processes rather than a first-order
desorption. For comparison, by artificially assigning the preexponential
factor to the typical value for first-order desorption (A = 1·1013), the activation energy obtained from the
constrained best fitting is then 0.31 eV (red dashed line), but it
is clearly deviating from the experimental data points.
Collision Dynamics
The methanol–nopinone
system is modeled by classical MD, where both monomer–surface
and cluster–surface interactions are simulated. The nopinone
crystal is constructed based on the experimental data,[40] which is characterized by a bilayer structure
having functional groups directed inside the bilayer (Figure a). The molecules within bilayers
cohere through relatively week hydrogen bonds between carbonyl groups
from one side and hydrogens atoms from the surrounding molecules.[40] Weak van der Waals forces between bilayers are
responsible for overall crystal structure cohesion. The melting point
of nopinone has been experimentally determined to 260 K.[40] In this work, the investigated temperature is
well below the melting point of bulk nopinone, i.e., the simulations
are conducted at 220 K, so nopinone has a crystalline structure. The
nopinone surface is characterized by well-ordered hydrocarbon groups
where carbonyl groups were generally inaccessible. The appearance
of hydroxyl groups on the surface may be considered as surface defects,
which appears as one of the surface molecules rotate for 180°
around one of the surface axes. Such hydrophilic sites on the surface
influence the desorption dynamics of incoming molecules. This is especially
evident for small molecules, like water,[11] which can rapidly diffuse on a smooth nopinone surface and eventually
bind strongly for the hydroxyl site.
Figure 4
Snapshots of a 10-molecule methanol cluster
colliding with the
solid nopinone surface at 200 K. Snapshot taken at (a) t = 0 ps; (b) t = 24 ps; (c) t =
108 ps; and (d) t = 154 ps.
Snapshots of a 10-molecule methanol cluster
colliding with the
solid nopinone surface at 200 K. Snapshot taken at (a) t = 0 ps; (b) t = 24 ps; (c) t =
108 ps; and (d) t = 154 ps.Figure presents
snapshots from simulations taken on critical moments during methanol
cluster–surface collisions, which mimics the moments when the
beam methanol cluster collides the nopinone surface. Figure a shows the initial conditions
of the simulations, where a 10-molecule cluster is placed 1 nm above
the surface. Just after colliding with the surface and during the
first 20–30 ps, the cluster shatters and fragments on the surface
(Figure b). Evidently,
there is a significant number of methanol monomers loosely bound to
the nopinone surface (Figure c), which can easily undergo TD. In the next step, methanol
molecules that do not undergo desorption within a period of ∼100
ps from impacting the surface form clusters on the surface again.
Methanol molecules diffuse on the surface efficiently (diffusion coefficient
≈ 5.35 × 10–5 cm2/s), which
allows them to quickly find other methanol molecules or clusters and
bind strongly to these. This is comparable to methanol monomer diffusion
on the graphite surface, even at very low methanol-surface coverages.[12] Molecules inside clusters are more strongly
bound and therefore not able to desorb directly. The molecules on
the cluster edges are relatively weakly bound, and they can either
directly desorb from clusters or go through a two-step process where
they first detach from clusters (Figure d) and then desorb as monomers.
Cluster Evolution
The evolution
of methanol clusters over time is presented from the aspect of binding
energy distribution shown in Figure . The energy is calculated as the instantaneous interaction
energy of one methanol molecule with the whole surrounding system
including the nopinone surface and other methanol molecules (left
panel) and without the nopinone surface (right panel). The distribution
in the top panel is corresponding to isolated methanol clusters, which
serves as a reference for the other two cases. All distributions shown
in Figure are characterized
by a broad energy range indicating the complex nature of the system,
which results in multistep dynamics of clustering. This agrees with
the experimentally determined kinetics parameter (Figure ), which indicates complex
desorption mechanisms of methanol from nopinone surfaces. Figure b shows the snapshot
∼50 ps after the collisions and the weakly bounded states are
visible, as the energy distribution is shifted to the lower energies.
The cluster undergoes fast rearrangements as seen in Figure c as the distribution is shifted
to higher binding energies again. At approximately 2 ns after surface
impact, methanol clusters are stable on the surface. The distribution
profile in Figure d shows the multiple components corresponding to several binding
states in the clusters.
Figure 5
Probability distributions retrieved by histograming
instantaneous
binding energies between individual methanol molecules with surrounding
molecules. Panel (a) shows distribution inside isolated methanol clusters.
On the left panel, from (b) to (d), are distributions corresponding
to binding energies between methanol molecules and the surrounding
system including the nopinone surface. On the right side, from panels
(e) to (g), the nopinone surface is omitted from calculation of binding
energy, thus showing exclusively interactions between methanol molecules.
The time window for which distribution is calculated is visible as
a legend in the upper right corner of each individual plot.
Probability distributions retrieved by histograming
instantaneous
binding energies between individual methanol molecules with surrounding
molecules. Panel (a) shows distribution inside isolated methanol clusters.
On the left panel, from (b) to (d), are distributions corresponding
to binding energies between methanol molecules and the surrounding
system including the nopinone surface. On the right side, from panels
(e) to (g), the nopinone surface is omitted from calculation of binding
energy, thus showing exclusively interactions between methanol molecules.
The time window for which distribution is calculated is visible as
a legend in the upper right corner of each individual plot.For comparison, the right-hand side panels show
the energy distributions
when the nopinone surface is omitted; thus, only the methanol–methanol
interactions are visible. Apparently, when there is no surface present,
the energy distribution is more sharply peaked at −40 kJ mol–1 (∼2 hydrogen bonds) and −20 kJ mol–1 (∼1 hydrogen bond), respectively (Figure g), revealing two
typical conformation configurations. One of these is stronger, inside
of the cluster and the other, which is seen on the edges, is more
probable to desorb. The difference between the left and right panels
indicates the influence of the nopinone surface on the cluster-binding
states. The presence of a surface strengthens the binding energy of
the methanol molecules due to the methanol–nopinone interactions,
and the smoothing effect of the surface indicates the complexity of
the methanol cluster on the nopinone surface system. Nevertheless,
inside clusters, the methanol–methanol interaction energy is
dominant in the overall energy distribution, especially when the cluster
is equilibrated on the surface, and this supports the conclusion statement
that desorption dynamics are mainly driven by internal cluster methanol–methanol
interactions.
Temperature Effects
Methanol desorption
from each of the investigated surfaces (a graphite surface, a thin
nopinone coating on graphite, and a solid nopinone surface) shows
a uniform temperature dependence (Figure a), indicating that all the surfaces either
have similar or negligible influences on the desorption processes.
To understand the temperature dependence of methanol desorption from
the nopinone surface, a methanol cluster consisting of 60 molecules
is placed above the nopinone surface and equilibrated at different
temperatures. Two distinct configurations of methanol clusters on
top of the nopinone surface at two different temperatures (100 and
150 K, respectively) are shown in Figure . At the lower temperature (Figure a), the methanol cluster retains
a compact shape, and the methanol–methanol internal interactions
(binding energy = 30.8 kJ mol–1) are stronger than
the methanol–surface interactions (binding energy = 8 kJ mol–1). At the higher temperature (Figure b), the methanol molecules spread on the
nopinone surface and the methanol–surface interactions become
more significant (binding energy = 25 kJ mol–1)
while the internal methanol–methanol interactions are weakened
(binding energy = 13 kJ mol–1). The total binding
energies of methanol molecules are comparable in the two cases, i.e.,
40 kJ mol–1 at the lower temperature and 38 kJ mol–1 at the higher temperature. The observed enhancement
of desorption in the EMB experiments at higher temperatures may be
attributed to the increased wettability by methanol on nopinone. This
accelerates the monomer detachments from clusters, which may lead
to an increase in desorption. Temperature increase eventually leads
to cluster destruction, whereby the stronger interactions from ∼2
hydrogen bond conformations vanish and in turn make methanol monomers
free to desorb from the nopinone surface. Thus, the surface acts as
a boundary which interacts relatively weakly with methanol molecules
and restricts the movements of trapped molecules.
Figure 6
Configurations of a methanol
cluster (in blue) on top of solid
nopinone surfaces (green, red, and white atom representation) at temperatures
(a) T = 100 K and (b) T = 150 K.
Configurations of a methanol
cluster (in blue) on top of solid
nopinone surfaces (green, red, and white atom representation) at temperatures
(a) T = 100 K and (b) T = 150 K.
Liquid–Liquid
Mixing
So
far, only solid nopinone has been studied, the organic–organic
system does not display any signs of mixing between methanol and nopinone,
even though methanol species could well wet the solid nopinone surface.
The mixing of liquid methanol and nopinoneis, however, interesting
to investigate further, particularly for its implications for SOA.[49−51] Due to technical and physical limitations of the current EMB setup,
it is not possible to experimentally investigate liquid–liquid
interaction. Instead, the case of methanol clusters (n = 60) adsorbing on a liquid nopinone surface is simulated in MD.
Liquid nopinoneis obtained by applying simulated annealing all the
way to 330 K, and the nopinone bulk is then equilibrated at 270 K. Figure a shows that the
mean square displacements (MSD) of both methanol and nopinone are
constantly growing over time at 270 K. The increasing MSD of methanol
and nopinone indicates the fine mixing between the two compounds,
with a methanol diffusion coefficient Dmethanol = (1.64 ± 0.14) × 10–5 cm2 s–1. Figure b shows the initial and final snapshots, with an enhanced
insert showing a methanol molecule and its neighboring nopinone molecules.
Methanol clusters are dissolved in nopinone efficiently and methanol
monomers are able to quickly find strong binding sites and form hydrogen
bonds with nopinone molecules (Figure b). The mixing ability of methanol and nopinone influences
several key physiochemical properties of their mixtures, such as the
viscosity which in turn affects the further gas-to-particle partitioning
of components to the mixture, as well as cloud droplet and ice nucleation
properties and heterogeneous chemistry of the system.[52−55]
Figure 7
(a)
MSD evolution for nopinone and methanol during melting. (b)
Snapshots of nopinone and methanol before and after melting in 10
ns simulation time.
(a)
MSD evolution for nopinone and methanol during melting. (b)
Snapshots of nopinone and methanol before and after melting in 10
ns simulation time.
Conclusions
The methanol–nopinone interactions on
surfaces are investigated
by EMB experiments and MD simulations. In the EMB experiments, methanol
monomers and clusters are sent to collide with graphite, nopinone
coating, and nopinone multilayer surfaces in the temperature range
between 145 and 230 K. Methanol monomers are efficiently scattered
from the graphite surface, and the scattering is significantly suppressed
from nopinone surfaces, indicating a more significant energy transfer
between methanol and nopinone surfaces. For methanol cluster–nopinone
surface interactions, no significant differences in collision dynamics
and desorption processes are observed, suggesting that the desorption
is governed by methanol–methanol interactions (via hydrogen
bonds). Most trapped methanoldesorb within 10 ms at temperatures
of 180 K and above. At temperatures <180 K, the desorption rate
decreases and a long experimental time scale (60 ms) is used to resolve
the desorption. Three desorption components are identified. First,
the fast component is beyond the detection limit and therefore cannot
be resolved. The intermediate TD component exhibits a multistep desorption
characteristic and has an activation energy of Ea = 0.18 ± 0.03 eV, with a preexponential factor A = 108.9 ± 0.9. The slow desorption
shows a weak temperature dependence, indicating that it may be associated
with diffusion processes as methanol molecules exchange between clusters.
The MD results show that upon collision the methanol clusters shatter,
and the shattered fragments quickly diffuse and recombine to clusters.
The desorption involves a series of processes, including detaching
from clusters and desorbing from the nopinone surfaces as monomers.
The simulations reveal that at lower temperatures methanol form compact
cluster structures while at higher temperatures the methanol molecules
form layered structures on the nopinone surface. In addition, MD simulations
are used to study the liquid–liquid interactions between methanol
and nopinone, where the methanol clusters completely dissolve in liquid
nopinone, showing ideal organic–organic mixing.
Data Availability
The data that support the findings of this study are available
from the corresponding author upon reasonable request.
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